FFCP PHASE1:Hg19::chr16:81528979..81528991,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24319 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IY22 | |||
|association_with_transcript=25bp_to_ENST00000539778,NM_030629,uc002fgq.1_5end | |||
|coexpression_cluster_id=C970 | |||
|description=CAGE_peak_19_at_CMIP_5end | |||
|id=chr16:81528979..81528991,+ | |||
|ontology_enrichment_celltype=CL:0002274!2.51e-21!5;CL:0000457!2.51e-21!5;CL:0002191!2.51e-21!5;CL:0000097!2.51e-21!5;CL:0000831!2.51e-21!5;CL:0002028!2.51e-21!5;CL:0000763!3.68e-17!112;CL:0000049!3.68e-17!112;CL:0000163!1.22e-16!9;CL:0002032!7.86e-11!165;CL:0000837!7.86e-11!165;CL:0000037!3.75e-10!172;CL:0000566!3.75e-10!172;CL:0000764!1.40e-09!2;CL:0000765!1.40e-09!2;CL:0000050!1.40e-09!2;CL:0000038!1.40e-09!2;CL:0000558!1.40e-09!2;CL:0000547!1.40e-09!2;CL:0000549!1.40e-09!2;CL:0000550!1.40e-09!2;CL:0000552!1.40e-09!2;CL:0000988!2.83e-09!182;CL:0000094!1.41e-08!8;CL:0002139!1.69e-07!24;CL:0000775!8.85e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.01e-21;5!CL:0000764;1.21e-13;2!CL:0000558;1.21e-13;2!CL:0000163;4.18e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.01e-21,5;CL:0002028,6.01e-21,5;CL:0000764,1.55e-13,2;CL:0000765,1.55e-13,2;CL:0000050,1.55e-13,2;CL:0000038,1.55e-13,2;CL:0000558,1.55e-13,2;CL:0000547,1.55e-13,2;CL:0000549,1.55e-13,2;CL:0000550,1.55e-13,2;CL:0000552,1.55e-13,2;CL:0000163,4.18e-12,9;CL:0000763,2.70e-08,108;CL:0000049,2.70e-08,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.57e-18!8;DOID:8692!5.40e-17!31;DOID:1240!5.61e-13!39;DOID:2531!2.48e-09!51;DOID:0060083!2.48e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.43e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.69e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.24e-13!15;UBERON:0000179!2.24e-13!15;UBERON:0000463!2.24e-13!15;UBERON:0002193!6.74e-09!112;UBERON:0002390!7.66e-08!102;UBERON:0003061!7.66e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.54e-07;15!UBERON:0000179;1.54e-07;15!UBERON:0000463;1.54e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.54e-07,15;UBERON:0000179,1.54e-07,15;UBERON:0000463,1.54e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,2.72950145441001,0.207328115540772,0.144119953416961,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0,1.70894156152249,0.952927101831156,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0.556812347790485,0,1.89318974933188,0,5.63948020351398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0.166211681900156,0,0.19606253431774,0.167821586975843,0.569261198172555,0.794682894901893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55975789423744,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@CMIP | |||
}} |
Revision as of 12:26, 20 January 2014
Short description: | p19@CMIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_CMIP_5end |
Coexpression cluster: | C970_acute_Mast_Reticulocytes_chronic_blood_leukemia_CD34 |
Association with transcript: | 25bp_to_ENST00000539778, NM_030629, uc002fgq.1_5end |
EntrezGene: | CMIP |
HGNC: | 24319 |
UniProt: | Q8IY22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.01e-21 | 5 |
basophil mast progenitor cell | 6.01e-21 | 5 |
erythroid lineage cell | 1.55e-13 | 2 |
erythroblast | 1.55e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 1.55e-13 | 2 |
erythroid progenitor cell | 1.55e-13 | 2 |
reticulocyte | 1.55e-13 | 2 |
proerythroblast | 1.55e-13 | 2 |
basophilic erythroblast | 1.55e-13 | 2 |
polychromatophilic erythroblast | 1.55e-13 | 2 |
orthochromatic erythroblast | 1.55e-13 | 2 |
endocrine cell | 4.18e-12 | 9 |
myeloid cell | 2.70e-08 | 108 |
common myeloid progenitor | 2.70e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 1.54e-07 | 15 |
haemolymphatic fluid | 1.54e-07 | 15 |
organism substance | 1.54e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.69e-08 | 31 |