FFCP PHASE1:Hg19::chr17:76120057..76120077,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11322 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18021 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z403 | |||
|association_with_transcript=42bp_to_AB002405_5end | |||
|description=CAGE_peak_6_at_TMC6_5end | |||
|id=chr17:76120057..76120077,- | |||
|ontology_enrichment_celltype=CL:0000037!3.80e-19!172;CL:0000566!3.80e-19!172;CL:0002032!2.20e-18!165;CL:0000837!2.20e-18!165;CL:0000988!1.45e-17!182;CL:0000542!1.26e-10!53;CL:0000051!1.26e-10!53;CL:0000738!1.58e-10!140;CL:0000838!4.42e-10!52;CL:0000763!8.33e-09!112;CL:0000049!8.33e-09!112;CL:0002087!1.50e-08!119;CL:0002031!8.10e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000775;8.23e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.65e-20,168;CL:0002032,6.61e-19,161;CL:0000837,6.61e-19,161;CL:0000988,3.05e-18,177;CL:0000738,2.67e-11,136;CL:0000542,7.16e-11,53;CL:0000051,7.16e-11,53;CL:0000838,7.58e-10,52;CL:0000763,4.96e-09,108;CL:0000049,4.96e-09,108;CL:0000775,7.84e-09,3;CL:0002087,5.34e-08,115;CL:0002031,2.37e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.48e-13!51;DOID:0060083!2.48e-13!51;DOID:1240!9.68e-13!39;DOID:8692!1.24e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.72e-09;31!DOID:1240;1.19e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.80e-09,31;DOID:1240,1.97e-09,39;DOID:2531,1.78e-08,51;DOID:0060083,1.78e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-12!115;UBERON:0000178!1.77e-08!15;UBERON:0000179!1.77e-08!15;UBERON:0000463!1.77e-08!15;UBERON:0001049!3.18e-07!57;UBERON:0005068!3.18e-07!57;UBERON:0006241!3.18e-07!57;UBERON:0007135!3.18e-07!57;UBERON:0002020!7.92e-07!34;UBERON:0003528!7.92e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.05e-12;15!UBERON:0000179;6.05e-12;15!UBERON:0000463;6.05e-12;15!UBERON:0000125;1.03e-08;9!UBERON:0002308;1.03e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.03e-12,15;UBERON:0000179,8.03e-12,15;UBERON:0000463,8.03e-12,15;UBERON:0000125,7.61e-09,9;UBERON:0002308,7.61e-09,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,0.985207073399349,1.65292640758726,0,0,0.309632246632152,0,0,0,0.619737604642413,0.568676929949686,0,0,1.40381113229099,0.217010870715852,0,0,0,0.436194716338694,0,0.727752183563449,0,0.822335776043652,0,0,0.256160706529101,0,0,0,1.35426486594342,0.376484679085209,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.434377689410233,0,0,0,0.633765858935825,1.70083439972035,0.628975936525128,1.12328631146495,0.300353785683013,1.28580469357664,0,1.19350006319454,0.547992461293902,0,0.546138611262131,0,0,0.400395987036012,1.14950487990897,1.32208974556972,0,0,1.76171156811282,1.52909291250092,0,0.560508562981536,0,2.75393678159366,4.71612915298998,2.87842098599313,0.83593247695339,0.32592226663359,0.473447805734733,0,1.00269411196656,0,0.443067789167242,4.06205795647523,1.40900451698243,2.47112760363769,1.64437904603676,2.21080014228679,1.73881851441031,1.63115219478266,1.33770414044857,5.22677619024884,2.37949619664889,0.383220493601921,0.34362744548263,4.30133476433155,0,0,0,0,0.639933055772092,0,0.473554504088034,0,1.20964045934839,2.13952156626806,2.17236605824198,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0.649094787309367,0,1.32957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.464775771478074,0.829288440122964,0.252320850875628,0.36497735907583,0,0,0,0,0,0.354920400119532,0.674338760312407,0.482022059766964,0.330881918197182,0,0,0.134831308160164,0,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0.171567810298526,0.329250856225877,0,0.603173834469785,0.370353780634118,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.179117045405697,0,0,18.2285398021499,1.14462964217194,0,0,0,0.190493682876507,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0.358121926479791,1.00876629594175,0.788123040807709,1.94064817373566,4.10697716095195,0,0,0,0,0,8.98808428736619,17.9496875522415,2.48649308061621,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,0.647142602455851,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0.552485933615378,0,0,0,0,0.385076685522074,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0.254876273045038,0,0,1.97333888981341,0.522870902049801,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,2.53723804616085,3.0585488285695,1.13929437434833,2.38231775457789,1.64544909234478,3.8908398671563,2.16012574895246,0.79312517629427,0.106824071127473,0,0.245040215981032,1.67222857613147,0.144269212976445,0.640276590135727,0.478278818186467,1.59663497146253,0.383010740264733,1.2700414963433,2.27235358192189,1.96558024679421,2.51058146936511,1.41011906195721,0,0.677167111206413,2.08764497634809,1.21079824314629,0.425846237690326,0.343505344755765,0,0.894704431569664,0,1.17232857241224,3.34087408674291,0,0.270455678475983,0.33307196799782,1.4098700508785,0.18714054040822,0.146508179271894,0,0.66866030566487,0,0,0,0,2.98244294329889,0.281338832821026,0,0,0,0.398495976502139,0.276283915531148,0,0,1.23084805461069,0,0.0898683511473268,0.537063524026827,0,0,0,0,0,0.463840490809256,0,0,0.174919999992391,0,0.910347586283997,0.762760950878299,0.709163045303809,0,0,0.173624994933292,1.77148277162768,0.241192877250816,0,0,0.295547618953547,0,0,0.41827123283581,0.0769502585037971,0,0,0.179515288819544,0.217294743844016,0,0,0,0,0.470940769185074,0.831058409500782,0.676786981851542,0.392125068635479,1.51039428278258,0.75901493089674,1.11255605286265,0,0,0.141353071433941,0,0,0,0.611030144933625,0.593042257361244,0.123563938946503,0.208843899010911,1.34802265961354,0,0,0.729819156862664,0.391329237864179,0,0.789168805698781,1.20990716048664,0,0.947798694427319,0,0,0.664653872707185,0,0.627865836814451,0,0.284609546029793,0.416024019039416,0.520679215005393,0.0979923974143777,0.261177619741208,0.34945333648406,0,0.483781656445426,0.0730893170861856,0,0.193978032976839,0,0,0,0,0.443175571691151,1.17330829640882,0.240476460754601,0.213452994739353,0.39961921916426,0,0.114536596165916,0,0,0.124252535565433,0.235694034616795,0,0,0,0,1.20084057741958,1.50595916781192,0,0,0.525774708558629,0,0.916641696046735,1.43574604915363,0.199679000498991,0,0,0.201550417460179,0,0,0.551482276150566,0.247247575143499,0.876246070104404,0.196854963029498,0.338693328263138,0,0.272406812223151,0.482259445395058,0.137539436597234,0,0.449947783103001,0,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0.492555124496034,0,0.226624183040251,0,0,2.19781025814636,1.45455861916959,0,0.704815022316672,0.106787412567695,0.628817220398664,0,0.992332043623902,0.395223263795889,1.09613338542806,0,0,0,0,0,0.471162288750703,0.886068179966986,0.854183854313742,0.876336514945499,0,0.887432412294818,1.24192805882767,0,0.624902039810533,0.151649117541648,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0.829550616910385,5.45608864750288,0.531459361253452,0.817826971279221,0,0,0.211312123358627,0.19998739585493,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0.33946505990805,0,0,0,0,0.23658523500376,0,0,0,0.256916900385838,0,0.957803154342908,0.41023272848151,0,0.207471757392654,0.161475645631851,1.42769420259154,0.490738592505128,0.471878893390961,0.550285795565037,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0,0.739280431085226,0.270150338473579,0,1.2401207790071,0.443910671357348,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0.227662191351298,0,0.460935950223117,0,0.815636795721981,0.460409414939944,0,0.222462803784138,0.078493092850514,0.157115589916002,0.560544326627578,0,0,0,0.428859265059938,0.158013611732727,0.116241425368125,1.39086617842064,0,0,0,0,0,0.236664001461131,0,0,0.22910686854405,0,0,0.335566295393377,0.196300467230486,0.731507549893617,0,0,0,0,0,0,0,0,0.659643100472575,0.301925687133347,0.231522474323834,0.218559560503957,0,0.735444965261716,0.235676547101626,0.981542335574726,2.97046400327086,0.4226557275834,0,0.657887425858975,0.386747327841463,1.49911733887393,0.357107877211315,0,0.320965466756673,0,0,2.72345207987757,0,0.815897882290976,0,0,0,0,0,0,0.218531143927391,0.380095503034311,0,0.801652215796681,0.827054095813604,0,0,0.535928260312357,2.48750831837634,2.48239190068549,0,0,0.322944549180031,0.744896571550295,0,0.0636471582781649,0,0,0,0.875576689189638,0.0717222053926763,0,0.162806537221949,0,0,0,2.34640942403454,0.244482888365733,0,0,0.402547587182052,1.9234109538194 | |||
|short_description=p6@TMC6 | |||
}} |
Revision as of 17:37, 20 January 2014
Short description: | p6@TMC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TMC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_AB002405_5end |
EntrezGene: | TMC6 |
HGNC: | 18021 |
UniProt: | Q7Z403 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.65e-20 | 168 |
hematopoietic oligopotent progenitor cell | 6.61e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.61e-19 | 161 |
hematopoietic cell | 3.05e-18 | 177 |
leukocyte | 2.67e-11 | 136 |
lymphocyte | 7.16e-11 | 53 |
common lymphoid progenitor | 7.16e-11 | 53 |
lymphoid lineage restricted progenitor cell | 7.58e-10 | 52 |
myeloid cell | 4.96e-09 | 108 |
common myeloid progenitor | 4.96e-09 | 108 |
neutrophil | 7.84e-09 | 3 |
nongranular leukocyte | 5.34e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 2.37e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 8.03e-12 | 15 |
haemolymphatic fluid | 8.03e-12 | 15 |
organism substance | 8.03e-12 | 15 |
neural nucleus | 7.61e-09 | 9 |
nucleus of brain | 7.61e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.80e-09 | 31 |
leukemia | 1.97e-09 | 39 |
hematologic cancer | 1.78e-08 | 51 |
immune system cancer | 1.78e-08 | 51 |