FFCP PHASE1:Hg19::chr17:78695021..78695044,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=335bp_to_BC127818_5end | |||
|coexpression_cluster_id=C141 | |||
|description=CAGE_peak_1_at_BC127818_5end | |||
|id=chr17:78695021..78695044,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.34e-25!18;CL:0000789!4.34e-25!18;CL:0002420!4.34e-25!18;CL:0002419!4.34e-25!18;CL:0000790!4.34e-25!18;CL:0000084!3.92e-24!25;CL:0000827!3.92e-24!25;CL:0000625!1.43e-20!11;CL:0000542!8.43e-15!53;CL:0000051!8.43e-15!53;CL:0000838!8.59e-14!52;CL:0002087!7.01e-11!119;CL:0000738!6.47e-10!140;CL:0002031!3.98e-07!124;CL:0000623!7.54e-07!3;CL:0000825!7.54e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.23e-49;11!CL:0000084;4.30e-48;25!CL:0000791;2.04e-46;18!CL:0000789;2.04e-46;18!CL:0002419;2.04e-46;18!CL:0000542;7.03e-23;53!CL:0000623;2.12e-12;3!CL:0002127;6.32e-10;1!CL:0000785;6.32e-10;1!CL:0000911;6.32e-10;1!CL:0000895;6.32e-10;1!CL:0000819;6.32e-10;1!CL:0000814;6.32e-10;1!CL:0002087;1.04e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.09e-49,11;CL:0000084,4.15e-48,25;CL:0000827,4.15e-48,25;CL:0000791,1.96e-46,18;CL:0000789,1.96e-46,18;CL:0002420,1.96e-46,18;CL:0002419,1.96e-46,18;CL:0000790,1.96e-46,18;CL:0000838,6.80e-35,52;CL:0000542,3.44e-34,53;CL:0000051,3.44e-34,53;CL:0000893,2.43e-18,2;CL:0002489,2.43e-18,2;CL:0000809,2.43e-18,2;CL:0000808,2.43e-18,2;CL:0000894,2.43e-18,2;CL:0000806,2.43e-18,2;CL:0000807,2.43e-18,2;CL:0000805,2.43e-18,2;CL:0002425,2.43e-18,2;CL:0002087,2.99e-14,115;CL:0002031,1.48e-13,120;CL:0000738,1.59e-13,136;CL:0000623,2.25e-12,3;CL:0000825,2.25e-12,3;CL:0000037,1.93e-10,168;CL:0002127,3.71e-10,1;CL:0000914,3.71e-10,1;CL:0000911,3.71e-10,1;CL:0000814,3.71e-10,1;CL:0002042,3.71e-10,1;CL:0002039,3.71e-10,1;CL:0002040,3.71e-10,1;CL:0002041,3.71e-10,1;CL:0000810,6.33e-10,1;CL:0000895,6.33e-10,1;CL:0002436,6.33e-10,1;CL:0002427,6.33e-10,1;CL:0002428,6.33e-10,1;CL:0002429,6.33e-10,1;CL:0002433,6.33e-10,1;CL:0002431,6.33e-10,1;CL:0002432,6.33e-10,1;CL:0000988,9.01e-10,177;CL:0000819,9.82e-10,1;CL:0002032,1.81e-09,161;CL:0000837,1.81e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.04e-46;18!CL:0000051;7.03e-23;53!CL:0002425;4.10e-18;2!CL:0002427;6.32e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;6.32e-10;1!DOID:8675;6.32e-10;1!DOID:0060058;1.37e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.82e-10,1;DOID:8675,9.82e-10,1;DOID:0060058,1.56e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.34e-11!15;UBERON:0000179!5.34e-11!15;UBERON:0000463!5.34e-11!15;UBERON:0004177!1.43e-08!7;UBERON:0002370!7.42e-08!4;UBERON:0005058!7.42e-08!4;UBERON:0009113!7.42e-08!4;UBERON:0003295!7.42e-08!4;UBERON:0005562!7.42e-08!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.22e-09,4;UBERON:0005058,1.22e-09,4;UBERON:0009113,1.22e-09,4;UBERON:0003295,1.22e-09,4;UBERON:0005562,1.22e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.401088894940283,0.651032612147555,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,0.786021525498329,0.411202997999018,0,0,0,0,1.89397776704795,0,0.221533894583621,0.541607727530031,1.92136979588513,0.910415432919148,0.493313713811028,0.276350017785848,0.289803085735052,0.889719378972363,0.267540828089713,0,1.69964014046349,1.53288197440768,2.40539211837841,2.27717722817553,0.637130828648193,1.30216690771284,2.85135613334512,1.35517607169996,0.511946444617674,2.49861453104692,1.18388626022008,0.821127996921047,2.21767417547206,1.87208137048455,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5682822806835,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,0.985153801009636,1.2937654491571,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0.569647187174163,0.714695326373367,1.23408681925858,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0.557409525377156,0,4.90878719104057,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,3.46088135876195,0,0,0.276283915531148,0,0,0,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0,0.137041924646751,0,0,0,0.0801588202515337,0.640358984218058,0,0,0,0,0,0.248505071130865,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0.540219106755613,0,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.620747142958579,0,0.0636471582781649,0,0,0,0.80822463617505,0.0717222053926763,0,0.325613074443898,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p1@BC127818 | |||
}} |
Revision as of 17:53, 20 January 2014
Short description: | p1@BC127818 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC127818_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | 335bp_to_BC127818_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.22e-09 | 4 |
hemolymphoid system gland | 1.22e-09 | 4 |
thymic region | 1.22e-09 | 4 |
pharyngeal gland | 1.22e-09 | 4 |
thymus primordium | 1.22e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.82e-10 | 1 |
lymphosarcoma | 9.82e-10 | 1 |
lymphoma | 1.56e-08 | 10 |