FFCP PHASE1:Hg19::chr17:79479370..79479375,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=71 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=144 | |||
|TSSclassifier=strong | |||
|UniProt=Q6PJ43 | |||
|association_with_transcript=-194bp_to_uc002kai.1_5end | |||
|coexpression_cluster_id=C845 | |||
|description=CAGE_peak_10_at_ACTG1_5end | |||
|id=chr17:79479370..79479375,- | |||
|ontology_enrichment_celltype=CL:0002321!1.36e-16!248;CL:0000220!2.96e-16!246;CL:0000055!3.49e-16!180;CL:0000144!4.51e-15!625;CL:0002371!8.30e-15!591;CL:0000548!3.35e-14!679;CL:0000004!3.35e-14!679;CL:0000255!3.35e-14!679;CL:0000012!9.86e-14!682;CL:0000222!3.52e-12!119;CL:0000393!1.34e-09!60;CL:0000211!1.34e-09!60;CL:0000003!2.18e-08!722;CL:0000680!3.55e-08!57;CL:0000056!3.55e-08!57;CL:0000355!3.55e-08!57;CL:0000183!4.56e-08!59;CL:0000187!5.64e-08!54;CL:0000192!7.95e-08!42;CL:0000514!7.95e-08!42;CL:0000115!6.14e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002077;9.88e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.39e-14,250;CL:0000222,1.43e-11,121;CL:0000393,7.84e-09,61;CL:0000211,7.84e-09,61;CL:0000192,9.78e-08,43;CL:0000514,9.78e-08,43;CL:0000115,1.29e-07,36;CL:0000680,1.57e-07,58;CL:0000056,1.57e-07,58;CL:0000355,1.57e-07,58;CL:0002077,2.43e-07,34;CL:0000187,2.78e-07,55;CL:0000057,6.67e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.79e-11!79;UBERON:0007798!3.79e-11!79;UBERON:0000055!2.66e-09!69;UBERON:0001637!1.34e-08!42;UBERON:0003509!1.34e-08!42;UBERON:0004572!1.34e-08!42;UBERON:0001981!1.77e-08!60;UBERON:0007500!1.77e-08!60;UBERON:0004537!1.77e-08!60;UBERON:0006965!1.77e-08!60;UBERON:0003914!2.53e-08!118;UBERON:0000914!5.87e-08!83;UBERON:0002329!5.87e-08!83;UBERON:0003077!5.87e-08!83;UBERON:0003059!5.87e-08!83;UBERON:0007282!5.87e-08!83;UBERON:0009618!5.87e-08!83;UBERON:0007285!5.87e-08!83;UBERON:0004290!2.02e-07!70;UBERON:0000486!2.17e-07!82;UBERON:0004872!2.19e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.18e-11,78;UBERON:0007798,1.18e-11,78;UBERON:0000055,3.90e-10,68;UBERON:0001637,5.52e-09,42;UBERON:0003509,5.52e-09,42;UBERON:0004572,5.52e-09,42;UBERON:0007500,6.25e-09,59;UBERON:0001981,6.25e-09,59;UBERON:0004537,6.25e-09,59;UBERON:0006965,6.25e-09,59;UBERON:0007503,5.24e-08,78;UBERON:0003914,5.69e-08,117;UBERON:0004535,2.81e-07,109;UBERON:0004872,5.34e-07,83;UBERON:0000490,5.57e-07,148;UBERON:0002329,5.86e-07,71;UBERON:0003059,5.86e-07,71;UBERON:0007282,5.86e-07,71;UBERON:0004290,5.86e-07,71;UBERON:0009618,5.86e-07,71 | |||
|phase1_expression=1.09007027562334,4.92431204949261,1.69145284915165,6.00439790118782,1.78784437770915,5.23403114460221,0,0.631719873426831,1.04474251279935,2.45733936501509,12.5604210235037,0.655324116390517,1.31883489114227,1.11389717664042,0.331397375727916,4.70627602516243,2.41077811209591,5.84248072309899,3.41552959153355,1.23121058076788,3.26401105990805,4.38836610069323,0.572471974262113,3.42186062682211,2.63639543149086,1.68109492645493,1.64201178899891,2.2826126580967,0.393364276848904,0,0.309632246632152,6.43594857135249,4.819294700452,2.9580320813343,0.0774672005803016,0,0.293600439334847,0,0.802177789880567,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0.581592955118259,1.13362783106643,1.69808842831471,2.32429036905685,1.23350366406548,0.929119112685311,1.7261543539329,2.30544635876191,2.83778675866302,0.689491361473237,1.29096936716765,2.70852973188684,1.31769637679823,1.09162460023138,1.79778787556068,4.89734227793444,2.56743221660875,0.639337125799041,1.64925650093358,0.598390972864896,1.27867425159808,2.32167390902867,2.8369261234557,2.4912889959823,1.25624332628372,0.521482918420201,1.73751075764093,4.23779651843358,1.47311054395026,1.89877432464531,0.422510572623884,0.637812899895131,0,0.44931452458598,0.750884464207532,0.48217676009124,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0,0,0,1.12101712596307,0.263384084775077,0,0.393010762749165,0.616804496998528,0.334372990781356,0.32592226663359,0,0,1.33692548262208,0.294605907474837,0.886135578334485,0.270803863765016,1.15282187753108,1.04047478047903,1.31550323682941,2.48715016007264,2.60822777161547,0.593146252648242,0.267540828089713,0,1.35971211237079,0.383220493601921,0.34362744548263,0.506039384039006,0.637130828648193,0.651083453856419,0,0.301150238155546,0.76791966692651,0,0.473554504088034,0,0.403213486449465,0.534880391567015,0.144824403882799,2.43806866313962,1.34140171940727,1.15076305659177,0.361439152384566,6.01605492763067,2.462390822334,2.3858578411533,0.973269740605272,1.60709189178915,5.32150553910154,2.0202000709419,0.458426764241994,2.5500670180478,1.85392221392215,0.649094787309367,0.522389211897802,1.72845348674525,0.238490624305342,0,0,2.18638648103376,3.4409383804245,1.73570250803797,1.69592382577203,5.87299210693868,3.30141650328081,3.9709043641994,1.29208379584664,1.42306505074684,1.33888245105868,1.61131726843659,4.56163263431108,3.1728067481262,0.735326160691737,4.0507097394088,2.14319347881791,0.44905874525234,0.563057402416611,3.06633274931766,3.79706263827252,2.01521918323448,0,0,0.872188104285069,3.47880366186723,2.5326102332916,0.662045904066094,1.14734648299525,1.41867352879343,3.36406560085384,6.4049397437823,3.7000132262574,0.622422070799533,1.61652806483626,2.45192854670188,1.21085942115945,1.72852777344,0.234321431833797,1.24864030732128,0,1.34503812496621,2.11382097558777,0.971237666208789,2.52811452064047,1.02077085627447,2.57952066354713,1.75653827998801,1.18800285728205,3.70900393917835,1.82032272387605,3.59309070908119,0.673344455816265,1.62654075833553,0,5.70670907145089,7.04921930337745,2.85452311922534,1.13432183160021,2.69084453533293,0.85422955527427,1.69545520927649,1.20036438433761,1.44273540933814,2.57640540045629,1.48893485065272,0.675105328965065,3.31285817548075,1.7670364197088,1.28869858099219,1.13152239773168,1.42003837006646,2.11579406278045,1.3564847384839,0.966304265816484,0.818238361772504,0.573609190778008,1.34171076742555,2.38553582978673,2.44007280025989,1.96956004529204,2.01856680700503,2.91981887260664,1.56449532329816,7.71889125831462,2.76269842704961,3.71494342425583,3.60939740834793,3.43089720115547,2.19160097101532,1.68707720918437,3.52940712743661,2.83243277320128,1.89816495288877,1.48314438976181,2.74710051175484,4.23221872641029,2.95262181849859,2.80483547606892,1.2347220339942,5.88034845542168,0,0,0.590789906681404,2.20731549707325,0.245976877086227,1.02940686179115,1.64625428112938,1.1240175325762,1.70899253099772,0.925884451585296,0.325808305310325,3.11980435583874,1.44331342025273,1.04337364477569,0.939269553886573,2.7429625074604,2.31492756288305,2.09279567458058,3.1608175918371,0.858486162094873,0.492434012174795,0,1.0404181360211,3.74935335947108,0.839910640994298,2.41017665312057,0.179117045405697,1.16253575405585,2.68367875415648,0.492663237895943,0.176096868026452,1.4512968087854,0.432359860250884,0.88369703398466,0.190493682876507,3.05590740446622,10.5495702489042,6.84289784090821,2.26220483947312,0.600686115687835,1.42913216315289,0.897048674762886,1.74384027533312,1.1734125731352,2.06834745212444,0,0.845302752556,1.32969058292435,5.2003718455683,1.80045161983499,1.41849132023278,4.52917704327369,1.14382394926518,2.17048642156577,1.64648067356154,0.325736184293735,0,2.37585561880029,1.20575750823834,0,2.29937879718731,0,0.502257091432126,8.43335757932127,1.91699884393266,0,1.42636905040718,1.73737568001095,1.64381058040307,1.07436577943937,0.224170287987055,0,0,0.513372145118994,0.76228387266739,0,2.31986643833309,0.670065061337395,5.10351001322531,0,2.99161459204025,0,2.08575535922538,3.50119364741774,2.17012018959788,3.11956292296211,8.20773348466944,2.83864347061082,3.16281820480326,5.11608369537122,6.82222512167955,4.1389228517002,0.664225598535437,3.31864503375066,1.91143951829782,2.54541504701563,1.02943027143257,0,0.431428401637234,0.640365346820666,0.606255142892519,0,1.20956117331872,0.496215615637554,1.99500565274481,3.36792113319688,1.15325234330131,3.58195074346692,2.41280881715411,0,2.7757744884478,1.9531789784444,0.657017248110473,0,2.20799719073923,1.0877350463246,2.6065841139427,1.74953878978203,2.06666006696292,2.36718518408732,3.14698595902618,2.70719767744447,1.69433741629712,3.13739907670742,1.46139224653261,1.05551628892876,1.13733384070897,1.70093705276516,2.59099099322567,6.16909010761157,1.35473218771926,0.501689773854853,0,0.831076008928724,1.79099803777743,0,0,1.79515087581472,2.29610251989794,0.650756789328606,0,1.64825036673018,0.660075999364704,1.14853107599234,1.95018073810956,0,0.48335359146061,3.54311819363682,2.14905144616581,1.65403886981437,0.859361958946189,1.30515024522806,0.93749290157711,0.534192213880424,1.15699440752685,1.34533047155574,0.510450849978337,1.51736671283325,4.18360994367557,0.31481234683064,0.6970372701606,0.308033580176089,0.532306030317022,1.73986598415015,4.07713282028624,2.71937284809783,0.372158369359667,0.949138274156178,3.8126038784765,1.02359116524534,3.42351190427136,1.90921948755562,4.70969184119538,0.899362287916574,2.47083326762449,3.76999687506197,3.03273722359974,1.58510321173008,2.10629228119491,1.95053495635836,1.21856744815642,3.16950440270266,0.9554993798559,1.55545975149084,1.13008116620243,3.85955740482287,1.32687795048244,3.5076070820301,1.73632660280006,2.62357900818653,4.66693867014219,4.957175969596,2.25356482025793,0.573645408816206,1.47373561519682,3.21003946333125,3.54761064070598,0.844430541190656,2.96365403663912,1.51789269506286,3.49934720244983,1.53955380360819,4.69211592875051,4.3556393944529,0.0941438007767792,2.58303223602738,1.68471475667626,6.65145230305014,1.83778720165568,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0.961416640147258,0,0.490080431962063,0.185803175125719,0,0.0711418433484141,0.318852545457645,0.798317485731266,1.1490322207942,1.05836791361941,1.94773164164733,0.842391534340376,0.912938716132769,1.25343916618419,2.50634477090067,0.169291777801603,0.963528450622197,2.01799707191048,0.851692475380653,0.343505344755765,0.614481528616916,0,0.500547425135725,1.56310476321632,0,0,0,1.33228787199128,0,0.935702702041099,0.879049075631364,0.970884173996107,0.66866030566487,0.852408440419239,0.47748896947538,0,1.53580351049616,0,0,0.333926115068718,0.659215496907038,0.211125408127993,0.19924798825107,1.10513566212459,1.0077309914171,0.511343412510774,0.246169610922139,2.48831670129446,0.449341755736634,1.07412704805365,1.02314474045374,0.690503839458535,0,1.11136990144637,0,0.74214478529481,0,1.30213880542617,0.349839999984783,1.44999915086959,0,1.5255219017566,0.709163045303809,0,0,0.173624994933292,0,0.723578631752448,1.52581736317083,0.221158519862449,0.295547618953547,0.438770794307945,0.10893846351899,0.278847488557207,0.615602068030377,0.569710279235006,0.23056390438806,0.538545866458633,0.760531603454056,0.31900115973192,0.732780747214898,2.13213910407454,2.04386596391473,1.41282230755522,0,0.451191321234361,0.19606253431774,0.335643173951685,0,0.476809736941136,2.10998064528027,1.14262965711403,0,0.432777279484182,0.995261931078505,0.884575645033392,3.66618086960175,0,0.247127877893006,0.522109747527277,0.067401132980677,0.802577647298789,1.87411556580271,0.729819156862664,0,0.728341138602278,0.789168805698781,1.20990716048664,3.67287313956588,0.252746318513952,0.450970258243478,0.311064574191741,0,0,0.313932918407225,0,0.284609546029793,0.554698692052555,2.08271686002157,0,0.34823682632161,2.27144668714639,0.51595809741485,1.74161396320353,0.365446585430928,1.06750094169172,1.64881328030313,0.176512253383001,1.58186518546373,1.09633539717401,0.596143835108969,0.126621591911757,0.391102765469606,0.480952921509202,1.49417096317547,0.19980960958213,0.144090417154106,0.343609788497747,0.686379991447858,0.14405479798815,0.248505071130865,0,0.543616824294456,0.104602846312333,0.305994652908965,0.577901179803038,0,0.136905378891993,0,1.71906176567983,0.525774708558629,0.279282401272254,0,0,0.998395002494955,0.858452096273142,0.223171457441873,0.134366944973453,1.44119953416961,1.16495949527454,1.02418136999391,1.40106959247983,0.808842526250219,0.0984274815147488,0.254019996197353,0,0.408610218334727,2.89355667237035,3.16340704173638,4.98528405635022,0.2249738915515,2.32140586367385,0.121499113316049,0.670869375198532,0.551639951094387,0.314727528809989,0.422401346077626,0.896436696664224,0.191915197319445,0.714695326373367,0.662091970365432,1.77987976358325,4.3439968140297,5.18532894720761,4.89881040164114,0,0.164185041498678,1.36310417428337,0.226624183040251,0.732761168390412,0,0.387848869084652,0.39669780522807,0.342173675768659,0,1.17466153824464,0.314408610199332,0.414239055347196,0,0,1.46151118057075,0,0,0.2506898940227,0,0,0.471162288750703,0,1.09823638411767,0.250381861413,0,0.221858103073705,0.496771223531068,2.49027542885215,0.874862855734746,1.06154382279153,0.285465333544967,2.11739237728355,2.81000943484129,1.01444720027578,1.04478362020812,0.467426619694449,2.77402930751307,0.757612021100357,1.0062716070103,0,0.915360273587694,1.51230923763239,1.70980920641059,1.18284119991707,1.27437413730962,1.79921244865442,1.86315548251511,2.48823724704513,0.265841714557995,0.521745061811734,4.0569554429249,1.52322084867518,1.62748293281865,1.63663793282303,1.71856891267982,3.24823631914946,1.99047944349308,8.00055529326307,2.74716564146234,1.34699795506368,0,0.385239660814607,0.214441591374926,2.08795433572169,2.94717703165954,2.08370226891451,0.734210113519403,2.14906609297785,3.70561736593167,0.657852148736121,2.65033718918822,0.38582807654183,0.675769762612291,3.33113974164331,0.690860683462397,0.607719912354764,0.276516872303462,4.09206648562716,3.72021552877417,1.30852315404675,1.31043939538565,2.45772908753719,0.211312123358627,0.39997479170986,0.533458648470704,0,1.70254786070051,0.184105950251841,0.279759015438889,0.622077260032973,0.255788742607303,0.215649622793364,0.314531883711793,0.436838552768056,0,3.18862380152524,0.619678821295011,0.558644917973244,1.90802610392051,0.157723490002507,1.60114149657094,1.41070377476274,4.8999276376512,0.321146125482298,0,0.319267718114302,1.02558182120378,1.00828678488687,0.138314504928436,0.484426936895553,0,0.981477185010256,0.11796972334774,2.38457178078183,0.924205329202706,0.381382095467167,0,0,0.676892955143315,1.0085253435176,0.781514011233092,0,2.62035068016155,1.03499260351932,0.0675375846183947,0,0.206686796501184,0.0634158101939068,2.18789923607288,0.548257766857182,0.992422356778588,2.81393990975393,0.255524855279191,0.535701835878287,0.336283722218824,1.82089681270989,0,0.709618961301111,0.345701962667338,1.02892805662451,0.203909198930495,0.131545547125698,0.472775363535873,0.333694205676207,0.235479278551542,1.41404030924402,0.840816489941367,4.56579360254748,0.431855182437243,0,0.571812353413251,0.632054446930906,0,0.521574816907738,0.801711364730253,2.27937780579341,1.53646629384555,0.691259661814092,0.430227358820278,0.118332000730565,0.170426809518315,1.27016115057279,5.26945797651315,2.79185747097888,1.91107787795487,0.894843454382338,0.098150233615243,0.121917924982269,0,0.513314034281235,0,1.45713297917742,0.467878926924211,1.39265542612958,0.475680363110274,0.11294608203896,0.989464650708862,0,0.617393264863557,1.74847648403166,2.35158648180761,0.245148321753905,0.942706188406504,0.392616934229891,0.297046400327086,2.113278637917,1.18948980281472,0.657887425858975,0.386747327841463,0.599646935549574,0.535661815816973,0.352894871715692,0.0802413666891683,0,0.917458566809082,0.573358332605805,0.788857810965923,0.271965960763659,2.18175345170189,2.645134202577,1.85997509083376,1.38652688589425,1.73050624849516,1.00933139868063,0.98339014767326,0.886889507080059,1.83579893535567,0.534434810531121,0.827054095813604,1.50424523575425,0.606229585745915,1.87574891109325,0.829169439458779,0.413731983447581,1.0661699095049,0.714193294391221,0.775066918032073,0.434523000071005,0.560659312903067,0.190941474834495,0.808468755832877,4.78976845373315,1.02669990325584,0.5388164241167,0.215166616178029,0.332660356546013,0.162806537221949,0.320182037633146,1.9307228228694,0.718601616852695,2.34640942403454,0.122241444182866,2.44137706989443,0,0.603821380773079,1.28227396921293 | |||
|short_description=p10@ACTG1 | |||
}} |
Revision as of 17:59, 20 January 2014
Short description: | p10@ACTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ACTG1_5end |
Coexpression cluster: | C845_Alveolar_Hair_Olfactory_Osteoblast_Endothelial_Fibroblast_Smooth |
Association with transcript: | -194bp_to_uc002kai.1_5end |
EntrezGene: | ACTG1 |
HGNC: | 144 |
UniProt: | Q6PJ43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.39e-14 | 250 |
mesodermal cell | 1.43e-11 | 121 |
electrically responsive cell | 7.84e-09 | 61 |
electrically active cell | 7.84e-09 | 61 |
smooth muscle cell | 9.78e-08 | 43 |
smooth muscle myoblast | 9.78e-08 | 43 |
endothelial cell | 1.29e-07 | 36 |
muscle precursor cell | 1.57e-07 | 58 |
myoblast | 1.57e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.57e-07 | 58 |
ecto-epithelial cell | 2.43e-07 | 34 |
muscle cell | 2.78e-07 | 55 |
fibroblast | 6.67e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.18e-11 | 78 |
vascular system | 1.18e-11 | 78 |
vessel | 3.90e-10 | 68 |
artery | 5.52e-09 | 42 |
arterial blood vessel | 5.52e-09 | 42 |
arterial system | 5.52e-09 | 42 |
epithelial tube open at both ends | 6.25e-09 | 59 |
blood vessel | 6.25e-09 | 59 |
blood vasculature | 6.25e-09 | 59 |
vascular cord | 6.25e-09 | 59 |
epithelial vesicle | 5.24e-08 | 78 |
epithelial tube | 5.69e-08 | 117 |
cardiovascular system | 2.81e-07 | 109 |
splanchnic layer of lateral plate mesoderm | 5.34e-07 | 83 |
unilaminar epithelium | 5.57e-07 | 148 |
somite | 5.86e-07 | 71 |
presomitic mesoderm | 5.86e-07 | 71 |
presumptive segmental plate | 5.86e-07 | 71 |
dermomyotome | 5.86e-07 | 71 |
trunk paraxial mesoderm | 5.86e-07 | 71 |