FFCP PHASE1:Hg19::chr19:22027146..22027151,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:22027146..22027151,- | |||
|id=chr19:22027146..22027151,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.43e-11;3!UBERON:0000358;9.81e-10;1!UBERON:0005425;2.65e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.65e-09;1!DOID:3165;2.65e-09;1!DOID:0060121;2.65e-09;1!DOID:2438;2.65e-09;1!DOID:4418;2.65e-09;1!DOID:3095;6.74e-09;22!DOID:2994;6.74e-09;22!DOID:171;1.04e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.15e-09,1;DOID:3165,4.15e-09,1;DOID:0060121,4.15e-09,1;DOID:2438,4.15e-09,1;DOID:4418,4.15e-09,1;DOID:3095,6.82e-09,22;DOID:2994,6.82e-09,22;DOID:171,1.01e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.54e-08!94;UBERON:0001016!1.54e-08!94;UBERON:0002346!5.25e-08!90;UBERON:0001017!1.01e-07!82;UBERON:0001049!1.09e-07!57;UBERON:0005068!1.09e-07!57;UBERON:0006241!1.09e-07!57;UBERON:0007135!1.09e-07!57;UBERON:0000955!2.54e-07!69;UBERON:0006238!2.54e-07!69;UBERON:0005743!4.37e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;6.63e-15;5!UBERON:0005423;6.63e-15;5!UBERON:0005795;2.65e-09;1!UBERON:0002134;2.65e-09;1!UBERON:0000941;2.65e-09;1!UBERON:0001785;2.65e-09;1!UBERON:0002464;2.65e-09;1!UBERON:0004904;2.65e-09;1!UBERON:0001021;2.65e-09;1!UBERON:0005208;2.65e-09;1!UBERON:0004145;2.65e-09;1!UBERON:0005946;2.65e-09;1!UBERON:0005965;2.65e-09;1!UBERON:0002078;2.65e-09;1!UBERON:0002346;6.72e-09;4!UBERON:0000923;6.72e-09;4!UBERON:0010316;6.72e-09;4!UBERON:0005291;6.72e-09;4!UBERON:0000922;8.72e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.84e-09,1;UBERON:0005208,1.84e-09,1;UBERON:0005946,1.84e-09,1;UBERON:0005965,1.84e-09,1;UBERON:0002078,1.84e-09,1;UBERON:0000941,1.99e-09,1;UBERON:0001785,1.99e-09,1;UBERON:0002464,1.99e-09,1;UBERON:0004904,1.99e-09,1;UBERON:0001021,1.99e-09,1;UBERON:0003902,1.99e-09,1;UBERON:0005425,1.99e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0.263766978228454,0,0,0,0,0,0,0.369363174230364,0.408001382488506,0,0.286235987131057,0.684372125364421,0.376627918784408,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0.880801318004542,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0,0.889509253863555,0.426730222566507,0.800791974072025,0,0,0,0.569212969109448,0,1.91136614062614,0,0,0.790152254325231,0.786839080455332,0.393010762749165,0,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0.296573126324121,0,0,0.339928028092699,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0,0.802320587350522,0.724122019413995,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0.472674085820339,0.443458794925128,0.263504357079378,0.261958150995425,0.728590576585084,0,0,0.174129737299267,0,0.476981248610684,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0.367663080345869,0,0.357198913136319,0.44905874525234,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.587172493218824,0.323745888736263,0,0,0.859840221182376,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.348581828608555,0.414644220061482,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.264145302039678,0.207328115540772,0.576479813667846,0.50496973370552,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0.591092280605782,0.646882724578552,0.77005821767849,0,0,0,0.502548796003046,0,0.749007023947182,0,0,0,0,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0.501689773854853,0,0,0.671624264166535,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.255679882248303,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0.471249609382746,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0,0.288666338176536,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0.540031437238115,2.37937552888281,0.106824071127473,0,0,0,0,0.284567373393656,0.159426272728822,1.1974762285969,0.191505370132367,1.05836791361941,0,1.40398589056729,0,0,0,0.338583555603207,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0.562677665642051,0,0,1.26675244876796,0,0.828851746593443,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.520855522170466,0.0874599999961957,0,0,0.254253650292766,0,0.689486746482929,0,0.868124974666461,0,0.120596438625408,1.52581736317083,0.774054819518572,0,0,0,0,0.230850775511391,0,0,0.628303510868405,1.73835795075213,0,0,0.533034776018635,0,0.31396051279005,0.498635045700469,0.225595660617181,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0.442287822516696,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0.450970258243478,0.622129148383483,0,0,0,0,0.569219092059585,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0.264768380074501,0,0,1.19228767021794,0.0633107959558787,0.391102765469606,0,0,0,0,0,0.171594997861965,0,0.248505071130865,0,0,0,0.203996435272644,0.577901179803038,0,0.273810757783986,0,0,0.262887354279314,0.279282401272254,0.229160424011684,1.43574604915363,0.199679000498991,0,0,0.0671834724867263,0,0,0.157566364614447,0.247247575143499,0.404421263125109,0.0984274815147488,0,0,0.272406812223151,0.482259445395058,0.962776056180637,0.415440338029185,0.2249738915515,0,0.121499113316049,0,0,0.314727528809989,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0.574647645245373,0,0,0.146552233678082,1.32506888912221,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0.886068179966986,0,0.751145584238999,0,0.110929051536852,0.372578417648301,0.691743174681154,0.37494122388632,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149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| |||
|short_description=p@chr19:22027146..22027151,- | |||
}} |
Revision as of 22:27, 20 January 2014
Short description: | p@chr19:22027146..22027151, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:22027146..22027151, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 1.84e-09 | 1 |
right atrium valve | 1.84e-09 | 1 |
outflow tract of atrium | 1.84e-09 | 1 |
outflow part of right atrium | 1.84e-09 | 1 |
right cardiac atrium | 1.84e-09 | 1 |
cranial nerve II | 1.99e-09 | 1 |
cranial nerve | 1.99e-09 | 1 |
nerve trunk | 1.99e-09 | 1 |
nerve connecting eye with brain | 1.99e-09 | 1 |
nerve | 1.99e-09 | 1 |
retinal neural layer | 1.99e-09 | 1 |
presumptive neural retina | 1.99e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.15e-09 | 1 |
skin benign neoplasm | 4.15e-09 | 1 |
integumentary system benign neoplasm | 4.15e-09 | 1 |
dermis tumor | 4.15e-09 | 1 |
cutaneous fibrous histiocytoma | 4.15e-09 | 1 |
germ cell and embryonal cancer | 6.82e-09 | 22 |
germ cell cancer | 6.82e-09 | 22 |
neuroectodermal tumor | 1.01e-07 | 10 |