FFCP PHASE1:Hg19::chr19:35741303..35741323,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:35741303..35741323,+ | |||
|id=chr19:35741303..35741323,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.43e-21!254;CL:0000223!4.56e-16!59;CL:0002076!4.68e-14!43;CL:0002368!4.09e-07!13;CL:0002322!8.07e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002231;5.33e-17;3!CL:0002322;5.99e-10;5!CL:0002577;3.24e-08;3!CL:0002328;6.94e-08;3!CL:0002541;6.94e-08;3!CL:0000349;9.02e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,3.38e-17,3;CL:0002322,1.17e-09,5;CL:0000223,5.76e-09,58;CL:0002577,3.43e-08,3;CL:0002541,4.89e-08,3;CL:0002328,5.64e-08,3;CL:0002076,6.96e-07,42;CL:0000349,8.70e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0006242;6.41e-07;1 | |||
|ontology_enrichment_disease=DOID:305!4.57e-14!106;DOID:0050687!1.11e-08!143;DOID:1749!5.24e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.37e-15!169;UBERON:0000925!4.37e-15!169;UBERON:0006595!4.37e-15!169;UBERON:0005911!4.23e-11!82;UBERON:0001007!4.88e-11!155;UBERON:0001555!4.88e-11!155;UBERON:0007026!4.88e-11!155;UBERON:0005177!3.22e-10!107;UBERON:0000077!4.83e-10!130;UBERON:0003124!7.04e-09!7;UBERON:0004921!1.14e-08!129;UBERON:0004185!1.14e-08!129;UBERON:0005153!2.94e-08!37;UBERON:0000466!4.83e-08!126;UBERON:0009569!5.23e-08!113;UBERON:0005157!8.08e-08!51;UBERON:0006554!1.78e-07!44;UBERON:0005631!2.00e-07!14;UBERON:0000158!2.00e-07!14;UBERON:0005172!3.14e-07!55;UBERON:0005173!3.14e-07!55;UBERON:0001008!3.63e-07!45;UBERON:0000945!5.84e-07!8;UBERON:0010039!5.84e-07!8;UBERON:0005156!5.88e-07!59;UBERON:0000990!5.88e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.94e-08;3!UBERON:0002031;6.94e-08;3!UBERON:0003124;6.94e-08;3!UBERON:0000920;6.94e-08;3!UBERON:0002423;3.05e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.71e-12,7;UBERON:0005631,2.63e-09,14;UBERON:0000158,2.63e-09,14;UBERON:0004119,8.01e-09,160;UBERON:0000925,8.01e-09,160;UBERON:0006595,8.01e-09,160;UBERON:0000920,4.89e-08,3;UBERON:0004921,5.35e-08,118;UBERON:0004815,5.64e-08,3;UBERON:0002031,5.64e-08,3;UBERON:0009497,3.35e-07,25;UBERON:0000015,3.35e-07,25;UBERON:0002423,3.35e-07,25;UBERON:0006235,3.35e-07,25;UBERON:0004161,3.35e-07,25;UBERON:0005911,4.98e-07,82;UBERON:0001007,7.04e-07,145;UBERON:0001555,7.04e-07,145;UBERON:0007026,7.04e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,1.83884244895785,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.818238361772504,0.573609190778008,0.731842236777572,0.795178609928912,1.2781333715647,1.0366105501537,1.00928340350251,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,1.18157981336281,0,0.245976877086227,0,0.768251997860379,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.335964256397719,0.425325291727159,0,0.290633938513962,0.383382679165211,0,0.088048434013226,0.829312462163088,0.720599767084807,1.38866676769018,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,3.32870879020994,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,2.90062679019893,2.80709058424599,1.38121483403844,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0.325378394664303,1.54561517471583,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,1.15314040419064,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,2.44773882019626,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0,0,0.71623345421307,1.18785872333055,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0.359473404589307,0,0,0.197286811273867,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0.455173793141999,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0.658156191461918,0,0.278847488557207,0.461701551022782,0,0.46112780877612,1.34636466614658,0,1.27600463892768,0.641183153813036,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65372693510018,0,0,0,0,0,0,0,0.182454789215666,0.391329237864179,0,0,1.20990716048664,0,0.063186579628488,4.50970258243478,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0.881931576729399,0.174118413160805,1.39781334593624,0,0.0967563312890851,0,0.0821154570532092,1.26085721434945,0.0882561266915003,0,0,0,0,0.391102765469606,0.0801588202515337,2.13452994739353,1.39866726707491,0.288180834308212,0.229073192331831,0.171594997861965,0.14405479798815,0.248505071130865,0.471388069233591,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,0.160753148465019,1.10031549277787,3.32352270423348,0.2249738915515,0,0,0.335434687599266,0.0788057072991982,0.104909176269996,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0,4.39656701034247,0,0.129282956361551,0,0,0,0.961086713109252,0.471612915298998,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0.260994291965212,0,0,0.244736704506468,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0.490738592505128,0,0.550285795565037,0.115525666150338,0,0,0,0.376051641746286,0,0,0.261906694481422,0.163771917510097,1.03499260351932,0,0,0,0.0634158101939068,0,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0.887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0.313972371402056,0,0,0,0,0.47775168788705,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0,0,0.102662806856247,0,0,0.233939463462106,0.198950775161368,0,0.11294608203896,0,0.150962843566674,1.389134845943,0.218559560503957,1.88126918544609,0,0.235676547101626,0,0,0,0,0.375935671919414,0.0644578879735772,0.0999411559249289,0.535661815816973,0.352894871715692,0.240724100067505,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0.61193297845189,0.26721740526556,0.643264296743914,0,3.25848402338429,0,0,0,0,0,0.129177819672012,0,0,0.509177266225319,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.430333232356058,0,0.244209805832924,0,0,0.179650404213174,0,0.24448288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| |||
|short_description=p@chr19:35741303..35741323,+ | |||
}} |
Revision as of 22:45, 20 January 2014
Short description: | p@chr19:35741303..35741323, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:35741303..35741323, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 3.38e-17 | 3 |
embryonic stem cell | 1.17e-09 | 5 |
endodermal cell | 5.76e-09 | 58 |
placental epithelial cell | 3.43e-08 | 3 |
chorionic membrane mesenchymal stem cell | 4.89e-08 | 3 |
bronchial epithelial cell | 5.64e-08 | 3 |
endo-epithelial cell | 6.96e-07 | 42 |
extraembryonic cell | 8.70e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.71e-12 | 7 |
extraembryonic membrane | 2.63e-09 | 14 |
membranous layer | 2.63e-09 | 14 |
endoderm-derived structure | 8.01e-09 | 160 |
endoderm | 8.01e-09 | 160 |
presumptive endoderm | 8.01e-09 | 160 |
egg chorion | 4.89e-08 | 3 |
subdivision of digestive tract | 5.35e-08 | 118 |
lower respiratory tract epithelium | 5.64e-08 | 3 |
epithelium of bronchus | 5.64e-08 | 3 |
epithelium of foregut-midgut junction | 3.35e-07 | 25 |
anatomical boundary | 3.35e-07 | 25 |
hepatobiliary system | 3.35e-07 | 25 |
foregut-midgut junction | 3.35e-07 | 25 |
septum transversum | 3.35e-07 | 25 |
endo-epithelium | 4.98e-07 | 82 |
digestive system | 7.04e-07 | 145 |
digestive tract | 7.04e-07 | 145 |
primitive gut | 7.04e-07 | 145 |