FFCP PHASE1:Hg19::chr19:36066577..36066644,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000516857_5end | |||
|coexpression_cluster_id=C1360 | |||
|description=CAGE_peak_1_at_ENST00000516857_5end | |||
|id=chr19:36066577..36066644,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.59e-19!70;CL:0000557!4.63e-19!71;CL:0002057!7.70e-19!42;CL:0000766!6.58e-18!76;CL:0002009!1.18e-17!65;CL:0000860!1.91e-17!45;CL:0002194!1.63e-16!63;CL:0000576!1.63e-16!63;CL:0000040!1.63e-16!63;CL:0000559!1.63e-16!63;CL:0000763!4.03e-14!112;CL:0000049!4.03e-14!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.15e-19;33!CL:0002057;2.15e-19;33!CL:0000473;1.31e-17;39!CL:0000234;1.31e-17;39!CL:0000576;8.37e-12;48!CL:0000766;2.06e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.83e-22,48;CL:0000234,1.83e-22,48;CL:0000839,2.83e-22,66;CL:0000557,4.94e-22,67;CL:0000766,1.13e-20,72;CL:0000860,1.81e-20,42;CL:0002057,1.81e-20,42;CL:0002009,3.09e-20,61;CL:0002194,5.77e-19,59;CL:0000576,5.77e-19,59;CL:0000040,5.77e-19,59;CL:0000559,5.77e-19,59;CL:0000763,1.41e-15,108;CL:0000049,1.41e-15,108;CL:0002031,6.39e-08,120;CL:0000738,2.12e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.87e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.32e-17!80;UBERON:0001474!5.73e-16!86;UBERON:0002405!4.03e-13!115;UBERON:0002193!4.49e-13!112;UBERON:0002390!5.00e-13!102;UBERON:0003061!5.00e-13!102;UBERON:0004765!2.03e-12!101;UBERON:0001434!2.03e-12!101;UBERON:0002204!1.18e-11!167;UBERON:0003081!1.11e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.58e-20,76;UBERON:0001474,5.97e-18,82;UBERON:0002405,4.02e-16,93;UBERON:0004765,1.01e-15,90;UBERON:0002390,2.54e-14,98;UBERON:0003061,2.54e-14,98;UBERON:0002193,3.12e-14,108;UBERON:0001434,2.33e-13,100;UBERON:0002204,7.01e-13,167;UBERON:0003081,8.54e-12,203 | |||
|phase1_expression=3.08853244759946,2.99740733447376,1.55049844505568,1.0007329835313,0.446961094427288,0.872338524100369,0,1.89515962028049,4.17897005119742,0.491467873003018,0.697801167972428,0.655324116390517,2.11013582582763,0.37129905888014,0.331397375727916,47.735085398076,16.2727522566474,21.1789926212338,9.75865597581014,0.246242116153576,0.816002764977012,0.940364164434263,0.572471974262113,2.32686522623903,0.87879847716362,1.37544130346312,1.06730766284929,1.33808328233255,1.18009283054671,0.767658796194425,19.0423831678773,0.919421224478927,0.6024118375565,1.10926203050036,0.852139206383318,0.284338464974843,0,2.21598163412751,1.80490002723128,2.82114131930607,2.23915474239924,2.26725566213286,2.57575567634187,11.4864608635856,13.2256580291083,25.9564945470963,33.0049232406072,25.903576945375,17.0338503992307,30.4953935861479,57.1238375559894,13.4794871036494,43.0932100920773,23.8829332926016,23.0225027210381,19.2007186333457,18.2847120538757,16.6295378489363,23.2623758201886,32.0929027076094,24.9341479061626,56.7344236321152,16.5554835825954,19.6063385245039,20.3146467040009,67.5188417382456,31.1411124497787,23.1148772036204,23.4667313289091,13.9000860611275,36.9293696606355,36.0912083267813,30.063926806884,6.76016916198214,5.10250319916104,5.66078342872615,7.75067554910816,9.4611442490149,37.4490617004197,0,4.57508357557907,4.74926799788048,0,0,0,0.426730222566507,0,0,0,0,3.98449078376614,5.28513470433845,1.91136614062614,1.32171328579026,0,5.79444986505169,2.9506465517075,10.2182798314783,3.49522548299166,12.0374276681288,0,0.473447805734733,50.6549493860569,6.79603786999559,15.3195071886915,7.53215241584312,6.49929273036037,6.53265730600943,6.89314542067355,7.23526780256175,7.18510046243206,11.302320343667,11.5663519266407,31.5698177145861,28.2245914273437,9.97122215738582,0,0,10.1207876807801,0.318565414324097,0,0,0,0,0,0,0,2.82249440514625,9.09296665663925,3.18613688542158,4.87613732627923,0,3.32442660793179,0.722878304769133,1.00267582127178,2.02785126545153,0.795285947051099,19.9520296824081,1.51255707462509,3.1042115644759,1.84453049955565,0.72038491523742,1.45718115317017,2.22470665670658,5.19275829847493,4.35324343248168,3.85578085504709,1.66943437013739,0.571994910780128,0,2.38514888840046,3.4409383804245,1.38856200643038,10.1755429546322,0.419499436209906,0.825354125820202,3.34391946458897,2.32575083252396,2.84613010149368,1.67360306382335,0,3.04108842287405,1.70843440283719,0,2.43042584364528,0.357198913136319,4.26605807989723,3.37834441449967,4.5994991239765,0.949265659568129,2.01521918323448,0,0,0.872188104285069,2.48485975847659,1.13967460498122,8.34177839123278,0.286836620748814,2.12801029319014,1.12135520028461,5.33744978648525,2.96001058100592,0.933633106199299,0,0.163461903113459,1.05950199351452,0.576175924479999,1.87457145467037,1.5608003841516,0,1.94283284717341,0.23486899728753,0.323745888736263,0.140450806702248,1.22492502752936,0.61417158655884,1.34323515528495,0,3.95627086845691,1.82032272387605,1.43723628363248,0.336672227908132,0.750711119231785,0,1.31693286264251,3.0648779579902,3.75595147266492,1.92834711372036,0.179389635688862,0.640672166455702,0.635795703478686,0.300091096084402,0.309157587715317,0,0.18611685633159,4.05063197379039,0.194874010322397,0.757301322732344,0.460249493211497,5.4959659318396,0.355009592516614,0.10075209822764,0.169560592310488,0.966304265816484,1.36373060295417,0.573609190778008,0.365921118388786,0.132529768321485,0.580969714347592,0.310983165046111,3.78481276313443,14.964071722109,6.25798129319264,3.21620469096443,12.4321429217232,2.3218396401599,0,6.62518080223126,7.58631105351458,4.57920956778616,8.82351781859152,8.93305720778865,9.72809538355496,10.5168420364928,8.82996593064057,6.15595451114225,0,0,2.8810180793198,1.47008711385542,8.87285243752816,3.9313088667105,2.95394953340702,0.882926198829301,0.614942192715568,13.5538570135835,0.329250856225877,4.49607013030478,0.301586917234893,0.370353780634118,1.62904152655162,0,0,3.24605133930215,4.3441216867254,0.577465791044295,31.0200293426329,21.4987192025096,3.95102198979638,6.00940313466411,3.93947209739836,1.8720341211139,4.7561971932393,0,4.87148171776693,6.94697976487694,0.716468181622786,0.581267877027924,1.91691339582606,6.40462209264727,7.21997158908454,36.0750921040943,40.930066770417,46.7097003677606,1.65094525159639,6.11181480893244,8.20522130470329,49.6110093465845,0.514137463516618,14.416466776508,6.28818151787272,0,0,0.07333828582095,0.904902010304444,10.7296933755565,46.49165139058,0,0,0.514414748524284,4.25547396069835,1.0656887160644,1.57275793023962,1.62786481617433,4.11620168390384,0.65147236858747,1.06617584622764,0.791951872933429,0.602878754119172,0,0.99972991182057,21.8922805154143,18.5835123829887,162.342133401934,0.239624855491583,1.14861935834114,149.768750292754,1.59259437334337,4.72595541865882,1.79060963239896,0.560425719967636,1.18218456121156,3.66566877261179,1.79680250791648,0,0,0,0.502548796003046,1.91381625495949,6.74106321552464,44.8742188806037,5.38740167466846,1.2269149171914,1.00034104211935,0.271265023699736,3.11956292296211,4.10386674233472,5.04647728108591,6.67706065458465,2.40756879782175,2.27407504055985,7.24311499047534,0,5.16233671916769,0.260650843404249,0.195801157462741,0.686286847621712,0.82707210449155,4.09856981555372,2.45473382947922,0.909382714338778,6.65741758041988,2.41912234663744,0.496215615637554,8.5938705041315,5.05188169979532,1.15325234330131,1.02341449813341,3.53878626515936,0,1.23367755042124,1.24293207719189,0.0821271560138091,0,0.348631135379878,0.120859449591622,3.60911646545913,0.828728900423067,0.68888668898764,1.63882051206045,1.70461739447251,0.451199612907412,0.693138033939733,2.35304930753057,1.46139224653261,0.105551628892876,1.13733384070897,0.170093705276516,0.431831832204279,7.71136263451447,0.812839312631559,3.01013864312912,0.509752546090077,0.831076008928724,2.91037181138832,5.26223703950243,8.62736988382172,0.256450125116389,1.64007322849853,0,1.33953315142039,0.732555718546747,0.907604499126468,0.574265537996172,7.15066270640173,1.6068392984416,0.096670718292122,0,0.307007349452259,0.137836572484531,0.966782203814463,1.30515024522806,1.36362603865761,0.267096106940212,0.495854746082934,4.22818148203234,3.1903178123646,5.2602046044886,0.929691098594572,0,6.970372701606,0.616067160352178,1.59691809095107,0.869932992075073,2.59453906745488,0,0.372158369359667,0.632758849437452,1.90630193923825,1.02359116524534,1.28381696410176,3.18203247925937,4.70969184119538,1.43897966066652,2.19629623788844,2.12062324222236,1.61745985258653,20.6063417524911,0.842516912477962,1.46290121726877,2.19342140668156,0,0,2.54529777516683,5.65040583101214,15.4382296192915,2.65375590096488,1.75380354101505,5.20897980840019,120.028739624534,1.42037263873893,6.50629346009475,2.25356482025793,3.87210650950939,3.63521451748548,2.85336841185,0,2.53329162357197,0.329294892959902,0.379473173765715,2.0996083214699,0.673554789078584,21.4496728171452,0,1.31801321087491,0.86101074534246,0,3.10401107475673,0.459446800413919,1.01489521846434,0.764637207142375,6.83576624608995,1.19115887728894,1.64544909234478,2.59389324477087,0.540031437238115,11.8968776444141,0.854592569019785,11.5497582631603,0.245040215981032,0.185803175125719,0,0.355709216742071,0.478278818186467,0.798317485731266,0.191505370132367,1.05836791361941,13.6341214915313,0.561594356226918,0.684704037099577,0.156679895773023,20.0507581672054,6.26379577865932,0.481764225311099,1.61439765752838,1.27753871307098,0.687010689511529,0,0.447352215784832,0.333698283423817,0,1.67043704337145,18.4631098421569,7.84321467580351,1.33228787199128,22.5579208140559,0,2.19762268907841,1.21360521749513,0.557216921387392,0.568272293612826,33.4242278632766,13.3634106374687,3.68592842519078,4.97073823883149,2.39138007897872,0.556543525114529,0.988823245360557,0.63337622438398,2.78947183551498,7.45966571934099,1.0077309914171,0.511343412510774,0.246169610922139,1.86623752597084,0.179736702294654,1.07412704805365,1.02314474045374,2.76201535783414,19.1586473877552,27.7842475361592,0,2.31920245404628,0,19.7925098424777,0.874599999961957,0,0.341380344856499,1.01701460117107,1.89110145414349,1.37897349296586,2.04123229368278,0.520874984799877,5.31444831488303,2.89431452700979,4.5774520895125,1.87984741883082,0.295547618953547,4.16832254592548,0.21787692703798,0.41827123283581,2.07765697960252,1.13942055847001,0.69169171316418,0.359030577639089,0.651884231532048,40.8321484456857,11.3581015818309,4.26427820814908,1.02193298195737,0.470940769185074,1.16348177330109,0.676786981851542,0.784250137270958,0.503464760927528,0.569261198172555,0.476809736941136,1.47698645169619,0.489698424477443,0.565412285735763,0.432777279484182,2.98578579323551,1.68069372556344,1.22206028986725,0.889563386041866,0.247127877893006,0.417687798021821,0.404406797884062,11.236087062183,1.40558667435203,0,0,0.971121518136371,5.91876604274086,1.20990716048664,2.75465485467441,0.821425535170343,1.05226393590145,0.829505531177977,13.2930774541437,3.64091151463049,5.02292669451561,5.97362148864794,1.70765727617876,0.554698692052555,1.21491816834592,0.587954384486266,0.261177619741208,6.63961339319714,0.687944129886466,0.967563312890852,1.09633975629278,1.31384731285135,1.16386819786103,0.617792886840502,1.12990370390266,0.548167698587004,0.993573058514948,0.569797163602908,0.977756913674015,0.881747022766871,3.41524791582964,0.599428828746391,1.87317542300338,0.458146384663663,0.171594997861965,0.864328787928898,0.49701014226173,9.89914945390541,1.22313785466253,1.04602846312333,0.917983958726896,0.577901179803038,1.20084057741958,3.83335060897581,0,1.28929632425987,1.57732412567589,14.243402464885,3.20824593616357,2.15361907373044,1.99679000498991,2.14613024068285,12.9439445316286,1.14211903227435,2.16179930125442,13.9795139432945,1.89079637537337,1.40106959247983,1.14586024552114,0.393709926058995,0.169346664131569,3.18091875923721,2.99647493445466,4.98334760241559,4.40126197111148,5.40072439437941,51.2940472737421,33.2734840459918,0.728994679896296,1.0063040627978,2.99461687736953,0.83927341015997,0.844802692155252,2.68931008999267,2.1110671705139,0,1.98627591109629,2.5426853765475,1.08599920350743,0,0.326587360109409,2.39460383124975,0.656740165994712,1.5334921960688,1.24643300672138,4.39656701034247,1.32506888912221,8.40339216350079,3.04134984008187,1.19760786519031,4.22889013390003,7.36833146717093,0.314408610199332,7.04206394090232,0.496166021811951,0.592834895693833,0.243585196761792,5.74507131993164,0.544017803369474,0,0.306345576763462,0,0.785270481251171,4.43034089983493,2.92863035764712,3.254964198369,2.86704597845036,1.55300672151593,0.745156835296601,0.691743174681154,0.999843263696853,0.606596470166591,0.285465333544967,1.17632909849086,18.7333962322753,1.30428925749743,0,0.233713309847224,1.10961172300523,1.13641803165053,1.0062716070103,11.567545880755,0.457680136793847,0.453692771289717,0.310874401165561,0.591420599958536,0.477890301491107,6.74704668245407,0.465788870628778,11.611773819544,0.797525143673985,6.26094074174081,0.300515217994437,9.52013030421988,0,0.909243296012797,0.322231671127465,11.6008439969623,6.76763010787647,2.80019435264208,6.86791410365586,11.4494826180412,2.52369796457302,1.92619830407303,0.643324774124777,1.04397716786085,0.453411851024545,0.231522474323834,1.46842022703881,0.895444205407437,1.85280868296583,0.657852148736121,0.883445729729405,1.15748422962549,0.844712203265363,1.79369063011563,0.345430341731199,0,2.07387654227596,15.0042437806329,21.1255096098247,11.1224468093974,17.0357121400135,1.47463745252232,3.38099397373803,0.79994958341972,0.320075189082423,0.516644938982447,7.9452233499357,0.552317850755522,6.294577847375,32.3480175217146,0.511577485214607,0.646948868380091,0.157265941855896,0.655257829152084,0.169732529954025,1.91317428091515,0.867550349813015,7.82102885162541,1.59002175326709,0.394308725006267,0,5.64281509905094,2.1437183414724,0.963438376446893,2.8339315265117,1.75597244962866,2.2562800066483,1.26035848110859,0.899044282034833,1.29180516505481,54.2523796984787,0.392590874004102,0.235939446695481,1.28400018965175,0.693153996902029,2.66967466827017,11.0457588169616,0.198916222116275,2.632361492224,5.042626717588,3.90757005616546,0.785720083444267,0.163771917510097,0.443568258651136,0.607838261565552,5.46754669029693,3.72036233702131,0.760989722326882,1.09394961803644,9.3203820365721,16.3749688868467,1.75871244359621,0.511049710558381,21.9637752710098,0.336283722218824,3.03482802118316,0,1.68534503309014,1.15233987555779,2.57232014156128,0.475788130837822,0.789273282754189,0.236387681767936,0.889851215136553,0.941917114206168,2.67096502857203,1.68163297988273,4.56579360254748,1.29556554731173,2.8665101273223,0.643288897589907,0.316027223465453,1.85986280589,1.73858272302579,11.2239591062235,0.414432328326074,0.85359238546975,31.1066847816341,2.15113679410139,0.118332000730565,0.596493833314104,30.060480563556,0.9164274741762,12.4082554265728,7.64431151181946,0.671132590786754,0.588901401691458,0.487671699929078,376.156154406167,3.07988420568741,5.799072156691,3.88568794447312,1.16969731731053,0.397901550322736,0.594600453887843,0.90356865631168,0.329821550236287,0.452888530700021,1.00326405540328,0.655678681511872,0.940634592723046,1.71603825227734,4.24217784782927,10.4043487570921,0,2.5359343655004,3.90832363781979,2.34959794949634,0.902410431630081,0.199882311849858,2.32120120187355,1.76447435857846,0.641930933513346,7.30336388246517,18.8079006195862,3.87016874508919,0.631086248772738,1.35982980381829,0.872701380680755,3.1741610430924,5.57992527250127,1.38652688589425,0.865253124247578,0.504665699340316,0.764859003745869,0.760191006068622,0.917899467677836,1.06886962106224,0.36757959813938,1.25353769646188,1.89446745545599,1.60778478093707,3.31667775783512,2.37895890482359,2.77204176471275,0.714193294391221,1.22718928688412,0.620747142958579,0.560659312903067,1.20929600728513,2.22328907854041,4.78976845373315,1.71116650542641,1.34704106029175,1.29099969706817,1.66330178273007,0.651226148887796,0.640364075266293,42.4759021031268,0,2.34640942403454,0.366724332548599,0.406896178315738,7.32332451604064,3.22038069745642,0.961705476909699 | |||
|short_description=p1@ENST00000516857 | |||
}} |
Revision as of 22:49, 20 January 2014
Short description: | p1@ENST00000516857 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000516857_5end |
Coexpression cluster: | C1360_skeletal_Monocytederived_Smooth_optic_Myoblast_acute_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000516857_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.83e-22 | 48 |
phagocyte | 1.83e-22 | 48 |
myeloid lineage restricted progenitor cell | 2.83e-22 | 66 |
granulocyte monocyte progenitor cell | 4.94e-22 | 67 |
myeloid leukocyte | 1.13e-20 | 72 |
classical monocyte | 1.81e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.81e-20 | 42 |
macrophage dendritic cell progenitor | 3.09e-20 | 61 |
monopoietic cell | 5.77e-19 | 59 |
monocyte | 5.77e-19 | 59 |
monoblast | 5.77e-19 | 59 |
promonocyte | 5.77e-19 | 59 |
myeloid cell | 1.41e-15 | 108 |
common myeloid progenitor | 1.41e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 6.39e-08 | 120 |
leukocyte | 2.12e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.58e-20 | 76 |
bone element | 5.97e-18 | 82 |
immune system | 4.02e-16 | 93 |
skeletal element | 1.01e-15 | 90 |
hematopoietic system | 2.54e-14 | 98 |
blood island | 2.54e-14 | 98 |
hemolymphoid system | 3.12e-14 | 108 |
skeletal system | 2.33e-13 | 100 |
musculoskeletal system | 7.01e-13 | 167 |
lateral plate mesoderm | 8.54e-12 | 203 |