FFCP PHASE1:Hg19::chr19:51456277..51456301,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25818 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6366 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y337,Q53ZR3 | |||
|association_with_transcript=42bp_to_ENST00000336334,ENST00000391809,NM_001077491,NM_001077492,NM_012427,uc002pue.2,uc002puf.2,uc002pug.2_5end | |||
|coexpression_cluster_id=C2500 | |||
|description=CAGE_peak_1_at_KLK5_5end | |||
|id=chr19:51456277..51456301,- | |||
|ontology_enrichment_celltype=CL:0000066!1.04e-23!254;CL:0002076!8.67e-20!43;CL:0000223!8.03e-14!59;CL:0002077!1.44e-11!33;CL:0002159!1.15e-09!13;CL:0002251!2.48e-09!21;CL:0000076!1.74e-08!62;CL:0002368!1.71e-07!13;CL:0000622!3.17e-07!5;CL:0002321!7.34e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.30e-18;42!CL:0002159;6.57e-14;14!CL:0002251;1.21e-12;20!CL:0002368;1.47e-11;13!CL:0000622;1.56e-10;5!CL:0002077;9.50e-10;34!CL:0000154;1.10e-08;6!CL:0000150;7.00e-08;9!CL:0002621;1.61e-07;3!CL:0002166;7.50e-07;3!CL:0002623;8.53e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.41e-28,253;CL:0002076,7.72e-25,42;CL:0000223,6.32e-19,58;CL:0002159,6.44e-14,14;CL:0002251,1.21e-12,20;CL:0000076,2.80e-12,63;CL:0002368,1.20e-11,13;CL:0002077,1.44e-11,34;CL:0000622,1.56e-10,5;CL:0002321,5.90e-09,250;CL:0000154,1.10e-08,6;CL:0000150,7.00e-08,9;CL:0002621,1.61e-07,3;CL:0002166,7.28e-07,3;CL:0002623,8.53e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;3.04e-11;58 | |||
|ontology_enrichment_disease=DOID:1749!3.86e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.25e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.28e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.42e-13!72;UBERON:0000161!8.58e-12!35;UBERON:0000166!2.55e-11!21;UBERON:0004119!4.48e-11!169;UBERON:0000925!4.48e-11!169;UBERON:0006595!4.48e-11!169;UBERON:0000464!3.06e-10!104;UBERON:0001007!5.83e-09!155;UBERON:0001555!5.83e-09!155;UBERON:0007026!5.83e-09!155;UBERON:0000165!1.89e-08!28;UBERON:0000930!1.89e-08!28;UBERON:0000077!2.43e-08!130;UBERON:0000065!2.84e-08!53;UBERON:0005157!9.36e-08!51;UBERON:0005153!9.46e-08!37;UBERON:0001044!1.19e-07!6;UBERON:0003293!1.19e-07!6;UBERON:0003294!1.19e-07!6;UBERON:0010047!1.19e-07!6;UBERON:0000167!1.19e-07!6;UBERON:0000466!1.99e-07!126;UBERON:0003102!2.50e-07!95;UBERON:0004921!4.65e-07!129;UBERON:0004185!4.65e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;2.14e-15;19!UBERON:0000166;2.14e-15;19!UBERON:0000165;1.44e-14;28!UBERON:0001044;3.14e-11;6!UBERON:0003293;3.14e-11;6!UBERON:0003294;3.14e-11;6!UBERON:0010047;3.14e-11;6!UBERON:0003408;3.14e-11;6!UBERON:0000167;3.14e-11;6!UBERON:0001041;1.04e-09;14!UBERON:0001949;1.61e-07;3!UBERON:0001004;2.69e-07;65!UBERON:0003729;2.78e-07;13!UBERON:0004807;3.12e-07;22!UBERON:0005178;3.51e-07;34!UBERON:0002224;3.51e-07;34!UBERON:0001723;7.35e-07;3!UBERON:0001033;7.35e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,2.26e-17,22;UBERON:0001004,3.04e-16,74;UBERON:0000165,6.54e-14,29;UBERON:0000930,6.54e-14,29;UBERON:0000161,1.16e-13,36;UBERON:0003102,3.06e-11,99;UBERON:0001044,3.32e-11,6;UBERON:0003293,3.32e-11,6;UBERON:0003294,3.32e-11,6;UBERON:0010047,3.32e-11,6;UBERON:0000167,3.32e-11,6;UBERON:0000033,1.89e-10,56;UBERON:0000153,8.10e-10,62;UBERON:0007811,8.10e-10,62;UBERON:0004119,1.36e-09,160;UBERON:0000925,1.36e-09,160;UBERON:0006595,1.36e-09,160;UBERON:0001444,7.48e-09,49;UBERON:0000065,1.68e-08,54;UBERON:0005153,2.04e-08,37;UBERON:0001007,2.99e-08,145;UBERON:0001555,2.99e-08,145;UBERON:0007026,2.99e-08,145;UBERON:0005157,4.36e-08,47;UBERON:0001041,8.17e-08,87;UBERON:0001949,1.61e-07,3;UBERON:0005178,1.62e-07,34;UBERON:0002224,1.62e-07,34;UBERON:0003729,2.79e-07,13;UBERON:0005181,3.28e-07,35;UBERON:0001723,7.28e-07,3;UBERON:0001033,7.28e-07,3;UBERON:0010056,7.28e-07,3;UBERON:0000344,9.74e-07,20 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0.464448369948228,7.35536979583142,4.819294700452,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.523916301990851,462.655016131529,401.930335978321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,19.1881382942715,0,0.12663051166458,0,0.286836620748814,1.41867352879343,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.647491777472526,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,322.938885635869,90.5517120361571,337.569008772858,0.243947412259191,0.132529768321485,0.580969714347592,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,419.794841687993,215.81136625463,177.433636306528,5.18495292887766,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,21.5587818169587,193.01146530049,6.66342957039216,134.158667008867,162.464371629305,1094.55754901668,0,0,0.207328115540772,0,0.6312121671319,1.8414389344729,0,0,10.2643467613623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.34462068884717,12.2014684204041,18.8948953334088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95144636908534,0.535286966391485,0,1.63997980989798,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,114.689701013479,841.159833929413,0,0,0.917870904715969,23.4623798711854,25.0299845589348,0,0,2.11103257785751,0,0,0,0,0,0.501689773854853,32.1144104036748,29.9187363214341,4.70136984916574,0,0,0,0,0,0.103041011647722,0,0,49.3868362676708,154.714338556692,0,0,0.154048617114644,0,0,0,0,0.255679882248303,0,2.80984356113663,2.11409074101617,1.78657797492418,4.8555734810664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0.211107635297664,0,0,0,2.11688647996127,6.70302275535787,4.3556393944529,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,156.580698011879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92349595790849,0,0,0,0,0,0,0,0,59.6861211844225,6.83018765915069,10.4434638713739,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0.260427761085233,0,1.44999915086959,0,0,7.32801813480603,0,0,0,0,0,0,0.110579259931225,0,0,0,10.7356283094525,1.76985594558733,0,0,0,0,1.27600463892768,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,1.30586246527318,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,42.6548869271956,6.06950948835232,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,13.4514432822745,0.520679215005393,16.1687455733723,11.7529928883543,0.873633341210151,0.171986032471617,0,0,0,6.4982641047241,0,1.12990370390266,0,0,0,225.861847058697,59.8786387278957,0.213452994739353,22.3786762731986,0,0,0,0,0,46.9031128887423,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0.674921674654501,3.0952078182318,0,6.70869375198532,0.472834243795189,0.577000469484979,0,0,15.7370461801945,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,351.702696136019,0,4.08731193259131,4.14239055347196,0,0,0,133.413322873968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,30.8795891579893,0,0,0,0,0,7.10243328470236,0.219284049578707,1.59020231351293,17.9410055591951,0,0,0,0,0,0.194860308839388,0.132864840313363,6.05191958746624,0,0,2.3244333569449,0,0,0,0,0,300.740941596806,59.7194169631654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.9812451755641,0,640.16580884066,98.5433932262385,0,0,0,0,0,0,0,0,64.7609657630658,0.0675375846183947,0,0,0,0,4.38606213485746,5.95453414067153,0,0.383287282918786,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,1.33477682270483,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,17.4061577896951,12.6331673049523,47.6969166651723,6.45341038230416,0,0,0,446.30017992381,0,0,0.111855431797792,0.196300467230486,0.121917924982269,0,0,0,14.5713297917742,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.257831551894309,0,0.178553938605658,6.35210769088245,0.0802413666891683,0,5.04602211744995,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,0,0,0.151557396436479,0,0,0,1.0661699095049,0,0.258355639344024,0.0620747142958579,0,0.12729431655633,0,82.0792139571544,5.4757328173645,4.91669987006489,0.502055437748735,0.332660356546013,0.488419611665847,0,0,0,2.34640942403454,1.34465588601153,6.10344267473608,0,0.603821380773079,0 | |||
|short_description=p1@KLK5 | |||
}} |
Revision as of 00:44, 21 January 2014
Short description: | p1@KLK5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLK5_5end |
Coexpression cluster: | C2500_Mammary_Prostate_oral_serous_Corneal_Keratinocyte_lung |
Association with transcript: | 42bp_to_ENST00000336334, ENST00000391809, NM_001077491, NM_001077492, NM_012427, uc002pue.2, uc002puf.2, uc002pug.2_5end |
EntrezGene: | KLK5 |
HGNC: | 6366 |
UniProt: | Q9Y337Q53ZR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.41e-28 | 253 |
endo-epithelial cell | 7.72e-25 | 42 |
endodermal cell | 6.32e-19 | 58 |
general ecto-epithelial cell | 6.44e-14 | 14 |
epithelial cell of alimentary canal | 1.21e-12 | 20 |
squamous epithelial cell | 2.80e-12 | 63 |
respiratory epithelial cell | 1.20e-11 | 13 |
ecto-epithelial cell | 1.44e-11 | 34 |
acinar cell | 1.56e-10 | 5 |
embryonic cell | 5.90e-09 | 250 |
protein secreting cell | 1.10e-08 | 6 |
glandular epithelial cell | 7.00e-08 | 9 |
gingival epithelial cell | 1.61e-07 | 3 |
epithelial cell of Malassez | 7.28e-07 | 3 |
acinar cell of salivary gland | 8.53e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
oral opening | 2.26e-17 | 22 |
respiratory system | 3.04e-16 | 74 |
mouth | 6.54e-14 | 29 |
stomodeum | 6.54e-14 | 29 |
orifice | 1.16e-13 | 36 |
surface structure | 3.06e-11 | 99 |
saliva-secreting gland | 3.32e-11 | 6 |
gland of oral region | 3.32e-11 | 6 |
gland of foregut | 3.32e-11 | 6 |
oral gland | 3.32e-11 | 6 |
oral cavity | 3.32e-11 | 6 |
head | 1.89e-10 | 56 |
anterior region of body | 8.10e-10 | 62 |
craniocervical region | 8.10e-10 | 62 |
endoderm-derived structure | 1.36e-09 | 160 |
endoderm | 1.36e-09 | 160 |
presumptive endoderm | 1.36e-09 | 160 |
subdivision of head | 7.48e-09 | 49 |
respiratory tract | 1.68e-08 | 54 |
epithelial bud | 2.04e-08 | 37 |
digestive system | 2.99e-08 | 145 |
digestive tract | 2.99e-08 | 145 |
primitive gut | 2.99e-08 | 145 |
epithelial fold | 4.36e-08 | 47 |
foregut | 8.17e-08 | 87 |
gingival epithelium | 1.61e-07 | 3 |
thoracic cavity element | 1.62e-07 | 34 |
thoracic cavity | 1.62e-07 | 34 |
mouth mucosa | 2.79e-07 | 13 |
thoracic segment organ | 3.28e-07 | 35 |
tongue | 7.28e-07 | 3 |
gustatory system | 7.28e-07 | 3 |
future tongue | 7.28e-07 | 3 |
mucosa | 9.74e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.28e-10 | 14 |