FFCP PHASE1:Hg19::chr2:10442993..10443051,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3241 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5145 | |||
|TSSclassifier=strong | |||
|UniProt=P37235,C9JW46,O75544,Q6FGY1 | |||
|association_with_transcript=0bp_to_ENST00000307845,ENST00000423674,NM_002149,uc002raj.2,uc002rak.2_5end | |||
|description=CAGE_peak_1_at_HPCAL1_5end | |||
|id=chr2:10442993..10443051,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.22e-12!76;CL:0000557!1.07e-09!71;CL:0002194!1.27e-09!63;CL:0000576!1.27e-09!63;CL:0000040!1.27e-09!63;CL:0000559!1.27e-09!63;CL:0000839!3.37e-09!70;CL:0002009!2.12e-08!65;CL:0000115!2.94e-08!35;CL:0002078!1.57e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.83e-07;36!CL:0000473;9.09e-07;39!CL:0000234;9.09e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.99e-13,72;CL:0000557,2.41e-10,67;CL:0002194,2.43e-10,59;CL:0000576,2.43e-10,59;CL:0000040,2.43e-10,59;CL:0000559,2.43e-10,59;CL:0000839,8.04e-10,66;CL:0002009,5.21e-09,61;CL:0000115,1.03e-08,36;CL:0000473,1.16e-08,48;CL:0000234,1.16e-08,48;CL:0002078,6.06e-08,45;CL:0000763,5.47e-07,108;CL:0000049,5.47e-07,108;CL:0000213,5.58e-07,58;CL:0000215,5.58e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.72e-12!112;UBERON:0002390!1.77e-11!102;UBERON:0003061!1.77e-11!102;UBERON:0002371!8.98e-11!80;UBERON:0001474!4.83e-10!86;UBERON:0004765!4.92e-10!101;UBERON:0001434!4.92e-10!101;UBERON:0002405!1.62e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.02e-13,108;UBERON:0002390,5.05e-12,98;UBERON:0003061,5.05e-12,98;UBERON:0002405,1.33e-11,93;UBERON:0002371,2.05e-11,76;UBERON:0001434,1.01e-10,100;UBERON:0001474,1.33e-10,82;UBERON:0004765,6.30e-10,90 | |||
|phase1_expression=3.45188920614058,2.99740733447376,3.66481450649525,8.00586386825043,4.46961094427288,6.97870819280295,17.7309914717817,30.3225539244879,10.4474251279935,25.3105954596554,136.071227754623,5.89791704751465,8.44054330331051,31.6841863577719,52.3607853650107,15.4634783683908,16.8754467846714,25.5608531635581,23.4207743419443,16.6213428403664,39.9841354838736,19.7476474531195,9.15955158819382,18.888670660058,13.0564345178595,17.5750833220288,10.7551772179429,13.3808328233255,19.2748495655963,19.1914699048606,32.2017536497438,15.6301608161418,18.3735610454733,15.8994224371719,10.8454080812422,6.68195392690881,25.8368386614666,27.145775018062,29.4800337781108,30.1645110295034,53.5157983433419,48.5840499028469,57.954502717692,62.6666409139924,47.61236890479,61.6163515417053,31.3779199822674,41.9391245782262,31.5900498313006,23.3030837780942,36.6309810336614,18.9185783910868,32.4060939892421,32.9197188627751,28.4395621848118,58.1668829186649,49.6689193105279,34.607416604543,43.4639127166682,41.3998444928161,50.5076329381243,22.10003711251,31.3157942465962,25.5734850319616,22.0559021357724,35.1778839308507,20.553134216854,25.3761151909311,35.4608384525737,18.8954294893451,23.6105806027014,25.0428792471544,23.7346790580663,20.9142733448822,24.236890196015,26.8363066250721,32.3506457701906,30.1855554611428,22.3408565508941,27.9312488866424,29.4396682254653,25.3903173732841,22.879511779972,26.2146533405823,23.1272406004524,17.0692089026603,15.6154434944045,20.1163353984069,16.5261218196216,20.0351288452426,18.2148150115023,12.3319809767897,17.5845684937605,17.1822727152734,9.52864557068611,19.2270381885806,22.424913792977,22.7946242394516,29.4010143569298,18.7248874837559,36.1773715963285,34.5616898186355,29.2240092611867,15.5974639639243,22.6846548755625,21.4887877746113,18.143858872256,23.3126201900729,25.8818101644158,24.3368098813441,30.1221519386575,18.5473974870434,32.7713304588154,28.0917869494199,41.8142095219907,23.2284152530011,31.0408599817556,30.5828426479541,18.7234572094432,30.2637143607892,27.996588515826,28.5135613334512,16.2621128603995,18.6860452285451,28.7340671070395,23.6777252044017,22.1704559168683,21.7735282682711,21.1277754668971,26.647690314435,4.87613732627923,25.4866326687382,16.1106827922848,18.7948359239974,18.048164782892,28.9693037921647,7.15757352345989,15.5723158496843,7.37371573879729,5.98669373148923,10.1888351404026,35.560818997629,31.6936900814512,13.3482399402395,58.7430782514977,54.6767375119699,63.155031246461,20.5101936902594,15.4438625910635,18.5728750664782,32.5970348081396,42.1514951602001,38.8797361800506,58.226718018173,50.7594317813986,36.3155815360889,37.6190939766259,46.5150166504792,46.2496141492723,14.7277069616455,23.3641003923305,53.9793195060144,25.3824539850096,14.3388601334889,41.3172393419697,23.9323271801334,24.9227603615048,26.576309394064,47.5281576144238,72.1441901271778,43.0524098236457,123.873592389899,120.211881885981,16.1354799292738,9.44246708221105,7.47120018821021,8.34177839123278,6.02356903572509,20.5707661675047,16.2596504041269,10.6748995729705,19.98007142179,8.71390899119346,13.8751992231779,10.2980998961479,8.47601594811616,6.33793516927999,27.1812860927204,119.245149349182,71.8794495146006,73.2298534703825,16.9105678047021,21.3672286565934,20.365366971826,66.962568171605,94.3367556954378,48.3564655902582,62.9641514359488,44.2607803408617,44.5979067349633,98.4506854288247,37.8756256396649,39.0369782000528,50.7027331336055,26.7776348737311,33.4071697420931,41.1652281404075,8.28054937068154,5.02290979928813,11.9592137738398,9.32500365102072,10.5031883629541,9.68693774841326,5.66809188100384,17.3088676388379,8.60759294430458,8.18470843354068,8.58274832429989,10.4936884452221,9.86040946594752,5.32514388774922,10.5789703139022,11.3605596848027,18.7463027568398,10.9098448236334,19.7895170818413,3.29329006549908,1.85541675650079,3.95059405756363,5.59769697083,5.2987378683882,2.91981887260664,39.112383082454,56.6052025609739,127.084127644282,15.3241416250553,24.5439023767659,40.1060052135071,38.100139957651,45.5510846479781,42.3528855292393,44.8831654830357,40.3360052488864,36.9437784358851,36.1047495830637,31.1645197126576,44.2893272774789,46.2797853551371,25.5175887025468,20.5812195939759,15.2106041786197,19.6565443335525,16.5421173870793,7.06340959063441,7.87126006675927,7.72055146343365,13.2797845344437,33.7205259772859,20.8094972892076,5.37012981919472,17.5936484867575,48.8769349081402,20.2063878835383,11.0133884726323,5.28339124061197,21.3662342686389,26.8531597294434,19.7864318323982,24.4963363367375,33.4809603217,48.0123161870425,78.3914288216446,57.5202598057378,14.0600750980165,3.86358894857377,7.93940544557364,19.9715505627352,22.3788132655751,54.44034044146,8.37527504423104,61.8980491112979,56.1859193115492,43.0918660716715,66.5297624157022,64.3868648122594,243.326627080623,189.892264480276,189.890415085203,98.6115655024873,37.5428822304897,34.5849983483,16.5954004831134,11.3349617896653,10.8540663015006,12.4100847127467,46.4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| |||
|short_description=p1@HPCAL1 | |||
}} |
Revision as of 01:41, 21 January 2014
Short description: | p1@HPCAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HPCAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000307845, ENST00000423674, NM_002149, uc002raj.2, uc002rak.2_5end |
EntrezGene: | HPCAL1 |
HGNC: | 5145 |
UniProt: | P37235C9JW46O75544Q6FGY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.99e-13 | 72 |
granulocyte monocyte progenitor cell | 2.41e-10 | 67 |
monopoietic cell | 2.43e-10 | 59 |
monocyte | 2.43e-10 | 59 |
monoblast | 2.43e-10 | 59 |
promonocyte | 2.43e-10 | 59 |
myeloid lineage restricted progenitor cell | 8.04e-10 | 66 |
macrophage dendritic cell progenitor | 5.21e-09 | 61 |
endothelial cell | 1.03e-08 | 36 |
defensive cell | 1.16e-08 | 48 |
phagocyte | 1.16e-08 | 48 |
meso-epithelial cell | 6.06e-08 | 45 |
myeloid cell | 5.47e-07 | 108 |
common myeloid progenitor | 5.47e-07 | 108 |
lining cell | 5.58e-07 | 58 |
barrier cell | 5.58e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.02e-13 | 108 |
hematopoietic system | 5.05e-12 | 98 |
blood island | 5.05e-12 | 98 |
immune system | 1.33e-11 | 93 |
bone marrow | 2.05e-11 | 76 |
skeletal system | 1.01e-10 | 100 |
bone element | 1.33e-10 | 82 |
skeletal element | 6.30e-10 | 90 |