FFCP PHASE1:Hg19::chr2:54784822..54784837,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:54784822..54784837,+ | |||
|id=chr2:54784822..54784837,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.35e-29!254;CL:0000223!1.96e-15!59;CL:0002076!7.85e-14!43;CL:0000039!3.08e-08!7;CL:0000586!3.08e-08!7;CL:0002251!7.26e-08!21;CL:0000240!5.04e-07!6;CL:0000311!5.04e-07!6;CL:0000079!5.04e-07!6;CL:0000237!5.04e-07!6;CL:0000036!5.04e-07!6;CL:0000357!5.04e-07!6;CL:0000114!5.04e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.47e-09;2!CL:0000123;3.78e-09;2!CL:0000242;3.78e-09;2!CL:0000312;5.17e-08;5!CL:0000240;9.73e-07;6!CL:0000311;9.73e-07;6!CL:0000079;9.73e-07;6!CL:0000237;9.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.35e-15,253;CL:0000223,2.79e-12,58;CL:0002535,1.60e-09,2;CL:0000242,4.30e-09,2;CL:0000312,5.72e-08,5;CL:0002076,1.62e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009497;4.31e-11;13!UBERON:0004161;1.65e-09;11!UBERON:0001041;1.97e-09;30!CL:0000357;9.73e-07;6!CL:0000114;9.73e-07;6 | |||
|ontology_enrichment_disease=DOID:305!2.18e-47!106;DOID:0050687!3.73e-37!143;DOID:162!2.14e-23!235;DOID:14566!3.26e-22!239;DOID:1749!1.94e-10!14;DOID:299!1.66e-09!25;DOID:0050615!5.93e-07!16;DOID:7!7.24e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:305;2.09e-10;106!DOID:4468;9.51e-09;2!DOID:4362;5.17e-08;5!DOID:1749;5.54e-07;14!DOID:7;6.69e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.85e-29,106;DOID:0050687,3.84e-21,143;DOID:162,1.32e-12,235;DOID:14566,3.52e-12,239;DOID:4468,1.21e-08,2;DOID:7,1.67e-08,39;DOID:4362,6.75e-08,5;DOID:1749,5.86e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.81e-26!169;UBERON:0000925!8.81e-26!169;UBERON:0006595!8.81e-26!169;UBERON:0001007!6.36e-25!155;UBERON:0001555!6.36e-25!155;UBERON:0007026!6.36e-25!155;UBERON:0004921!3.54e-24!129;UBERON:0004185!3.54e-24!129;UBERON:0000077!1.70e-21!130;UBERON:0001041!2.94e-20!98;UBERON:0001004!1.56e-16!72;UBERON:0000065!2.35e-13!53;UBERON:0008947!6.59e-13!38;UBERON:0003258!6.59e-13!38;UBERON:0000466!3.70e-12!126;UBERON:0000072!2.22e-11!46;UBERON:0005911!8.33e-11!82;UBERON:0001048!4.91e-10!168;UBERON:0000464!1.22e-09!104;UBERON:0005153!4.39e-09!37;UBERON:0005177!7.85e-09!107;UBERON:0005156!7.95e-08!59;UBERON:0000990!7.95e-08!59;UBERON:0005157!2.00e-07!51;UBERON:0000161!2.72e-07!35;UBERON:0000344!2.92e-07!12;UBERON:0005409!4.66e-07!35;UBERON:0001737!5.02e-07!9;UBERON:0005178!5.18e-07!34;UBERON:0002224!5.18e-07!34;UBERON:0003104!7.14e-07!238;UBERON:0009142!7.14e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.47e-09;2!UBERON:0004801;1.47e-09;2!UBERON:0002107;1.75e-07;19!UBERON:0006925;1.75e-07;19!UBERON:0002423;2.68e-07;25!UBERON:0000002;9.73e-07;6!UBERON:0001560;9.73e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.60e-09,2;UBERON:0004801,1.60e-09,2;UBERON:0001007,5.18e-09,145;UBERON:0001555,5.18e-09,145;UBERON:0007026,5.18e-09,145;UBERON:0004921,1.02e-08,118;UBERON:0004119,1.31e-08,160;UBERON:0000925,1.31e-08,160;UBERON:0006595,1.31e-08,160;UBERON:0008835,1.63e-08,22;UBERON:0003894,1.63e-08,22;UBERON:0003929,2.10e-08,54;UBERON:0009854,4.26e-08,23;UBERON:0005911,1.22e-07,82;UBERON:0002107,1.75e-07,19;UBERON:0006925,1.75e-07,19;UBERON:0008836,1.75e-07,19;UBERON:0007499,2.29e-07,25;UBERON:0009497,2.29e-07,25;UBERON:0000015,2.29e-07,25;UBERON:0002423,2.29e-07,25;UBERON:0006235,2.29e-07,25;UBERON:0004161,2.29e-07,25;UBERON:0009856,4.81e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.246301768349837,0.550975469195755,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0.364295288292542,0.370784442784429,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,0.286804595389004,0.731842236777572,0.927708378250397,0.580969714347592,0.10366105501537,1.51392510525377,0.36497735907583,0,0,0,0,0,0.946454400318751,0.842923450390509,0.723033089650446,0.441175890929576,0,1.42362371466658,0.808987848960987,0.196221465125346,1.53898862778556,0,0,0,0,0,0,2.95394953340702,0,1.47586126251736,0,0.548751427043128,2.24803506515239,0.703702806881416,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0.40101294060657,1.10497186723076,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.495854746082934,0,1.65896526242959,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,1.34060455107157,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.490080431962063,0.185803175125719,0.28853842595289,0,0.637705090915289,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05854594449042,0,0.970884173996107,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0.494411622680279,0.211125408127993,0.19924798825107,0,2.51932747854276,0,0.246169610922139,0,0.808815160325942,1.9692329214317,0,0,0,0,0,0,0,0.260427761085233,1.04951999995435,0,1.365521379426,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.762569244632931,1.11538995422883,0.0769502585037971,0,0.69169171316418,3.41079048757134,0.760531603454056,0,0.366390373607449,0,0,0,0,0,0,0.335643173951685,0,0.158936578980379,1.26598838716816,1.30586246527318,1.97894300007517,0,2.98578579323551,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.450970258243478,0.518440956986236,0,0,0.313932918407225,2.38944859545918,0.569219092059585,0,1.04135843001079,0.0979923974143777,2.00236175134926,0.17472666824203,0,0.967563312890852,1.0232504392066,0.739039113478883,0.872901148395775,0.706049013532002,0,0,0,0,0.391102765469606,0.400794101257669,0.213452994739353,0.39961921916426,0.432271251462318,0.458146384663663,0.171594997861965,2.16082196982225,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,3.30889365690339,3.21421847686549,3.5723878242718,0.0984274815147488,1.01607998478941,0,0,0.964518890790115,0.687697182986169,0.415440338029185,0,0.77380195455795,0,0.335434687599266,0.157611414598396,0.157363764404994,0.316801009558219,0.35857467866569,0.959575986597226,0,0,0.5085370753095,0,0,0,0,0,0,0,2.19828350517124,1.32506888912221,0,0,1.19760786519031,0.704815022316672,0.320362237703084,0.314408610199332,0,0,0,0.365377795142688,0.638341257770182,0,0,0,0,1.41348686625211,0,0,0,0,0,0,0,0.124980407962107,0,0,0,2.34167452903441,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0,0.337884881306145,0.512483037175893,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0.184105950251841,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,2.35554524402461,1.41563668017288,0.183428598521679,0.808679663052368,0,0,0,0.0752103283492573,0,0.781514011233092,1.57144016688853,0,0.739280431085226,0,0,0,0,0,0.548257766857182,0,0.175871244359621,1.40538670403555,0,0,1.21393120847326,0.227662191351298,0.532214220975833,0.115233987555779,0,0,0,0.472775363535873,1.4460082245969,0.156986185701028,0,0,0,0,0,0.0714765441766563,0.47404083519818,0,0,0,0.207216164163037,0,0,0.860454717640555,0,0,0,0.68732060563215,0,0,0.335566295393377,0.294450700845729,1.5849330247695,0,0,0,0.971421986118279,0.701818390386317,1.39265542612958,0,0.22589216407792,0,1.05673990496671,1.23478652972711,0.437119121007915,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0.357107877211315,0,1.12337913364836,0.730336388246517,0.458729283404541,0,0.315543124386369,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0.253397002022874,0.815910637935854,1.06886962106224,0.735159196278759,3.50990555009325,0.378893491091197,0.803892390468535,0,0,0.426467963801962,0,0.516711278688049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| |||
|short_description=p@chr2:54784822..54784837,+ | |||
}} |
Revision as of 03:10, 21 January 2014
Short description: | p@chr2:54784822..54784837, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:54784822..54784837, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.35e-15 | 253 |
endodermal cell | 2.79e-12 | 58 |
epithelial cell of cervix | 1.60e-09 | 2 |
Merkel cell | 4.30e-09 | 2 |
keratinocyte | 5.72e-08 | 5 |
endo-epithelial cell | 1.62e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.60e-09 | 2 |
cervix epithelium | 1.60e-09 | 2 |
digestive system | 5.18e-09 | 145 |
digestive tract | 5.18e-09 | 145 |
primitive gut | 5.18e-09 | 145 |
subdivision of digestive tract | 1.02e-08 | 118 |
endoderm-derived structure | 1.31e-08 | 160 |
endoderm | 1.31e-08 | 160 |
presumptive endoderm | 1.31e-08 | 160 |
hepatic diverticulum | 1.63e-08 | 22 |
liver primordium | 1.63e-08 | 22 |
gut epithelium | 2.10e-08 | 54 |
digestive tract diverticulum | 4.26e-08 | 23 |
endo-epithelium | 1.22e-07 | 82 |
liver | 1.75e-07 | 19 |
digestive gland | 1.75e-07 | 19 |
liver bud | 1.75e-07 | 19 |
epithelial sac | 2.29e-07 | 25 |
epithelium of foregut-midgut junction | 2.29e-07 | 25 |
anatomical boundary | 2.29e-07 | 25 |
hepatobiliary system | 2.29e-07 | 25 |
foregut-midgut junction | 2.29e-07 | 25 |
septum transversum | 2.29e-07 | 25 |
sac | 4.81e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.85e-29 | 106 |
cell type cancer | 3.84e-21 | 143 |
cancer | 1.32e-12 | 235 |
disease of cellular proliferation | 3.52e-12 | 239 |
clear cell adenocarcinoma | 1.21e-08 | 2 |
disease of anatomical entity | 1.67e-08 | 39 |
cervical cancer | 6.75e-08 | 5 |
squamous cell carcinoma | 5.86e-07 | 14 |