FFCP PHASE1:Hg19::chr22:31495027..31495048,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr22:31495027..31495048,+ | |||
|id=chr22:31495027..31495048,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.22e-13!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.36e-90;5!CL:0002321;2.28e-30;15!CL:0000511;4.28e-19;1!CL:0002625;4.28e-19;1!CL:0000216;4.28e-19;1!CL:0000148;4.72e-17;10!CL:0000147;2.26e-12;14!CL:0000039;3.14e-11;7!CL:0000586;3.14e-11;7!CL:0000710;7.66e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.58e-90,5;CL:0000511,3.91e-19,1;CL:0002625,3.91e-19,1;CL:0000216,3.91e-19,1;CL:0000148,4.72e-17,10;CL:0000541,4.72e-17,10;CL:0000147,2.26e-12,14;CL:0000039,3.30e-11,7;CL:0000586,3.30e-11,7;CL:0000710,7.66e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.90e-08;10!UBERON:0005564;3.90e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!3.04e-13!11;UBERON:0000473!1.27e-10!8;UBERON:0003101!1.85e-07!22;UBERON:0000079!1.85e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.83e-21;8!UBERON:0001136;4.28e-19;1!UBERON:0001343;4.28e-19;1!UBERON:0004910;4.28e-19;1!UBERON:0004813;4.28e-19;1!UBERON:0003135;2.81e-15;11!UBERON:0000922;2.98e-10;49!UBERON:0004909;3.13e-10;2!UBERON:0000991;2.67e-08;21!UBERON:0003101;6.01e-08;22!UBERON:0000079;6.01e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.02e-20,8;UBERON:0001136,3.91e-19,1;UBERON:0001343,3.91e-19,1;UBERON:0004910,3.91e-19,1;UBERON:0005154,3.91e-19,1;UBERON:0005295,3.91e-19,1;UBERON:0004813,3.91e-19,1;UBERON:0005297,3.91e-19,1;UBERON:0005294,3.91e-19,1;UBERON:0010141,3.91e-19,1;UBERON:0005891,3.91e-19,1;UBERON:0003135,2.88e-15,11;UBERON:0004909,2.99e-10,2;UBERON:0000991,2.71e-08,21;UBERON:0009196,2.71e-08,21;UBERON:0009117,2.71e-08,21;UBERON:0005564,2.71e-08,21;UBERON:0004176,6.08e-08,22;UBERON:0003101,6.08e-08,22;UBERON:0000079,6.08e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0.272746120590835,0,7.31842236777572,3.18071443971565,6.27447291495399,2.90250954043037,9.08355063152262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46560704781065,0.825236619583403,0.83088067605837,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941917114206168,0.157115589916002,0.280272163313789,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0,0,1.71603825227734,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0.98339014767326,0,3.87557553019531,1.06886962106224,0.18378979906969,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0.870866991587845,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr22:31495027..31495048,+ | |||
}} |
Revision as of 15:21, 21 January 2014
Short description: | p@chr22:31495027..31495048, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:31495027..31495048, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.58e-90 | 5 |
androgen binding protein secreting cell | 3.91e-19 | 1 |
seminiferous tubule epithelial cell | 3.91e-19 | 1 |
Sertoli cell | 3.91e-19 | 1 |
melanocyte | 4.72e-17 | 10 |
melanoblast | 4.72e-17 | 10 |
pigment cell | 2.26e-12 | 14 |
germ line cell | 3.30e-11 | 7 |
germ cell | 3.30e-11 | 7 |
neurecto-epithelial cell | 7.66e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 1.02e-20 | 8 |
mesothelium | 3.91e-19 | 1 |
seminiferous tubule of testis | 3.91e-19 | 1 |
epithelium of male gonad | 3.91e-19 | 1 |
epithelial cord | 3.91e-19 | 1 |
sex cord | 3.91e-19 | 1 |
seminiferous tubule epithelium | 3.91e-19 | 1 |
testis sex cord | 3.91e-19 | 1 |
genital ridge | 3.91e-19 | 1 |
primitive sex cord of indifferent gonad | 3.91e-19 | 1 |
coelomic epithelium | 3.91e-19 | 1 |
male reproductive organ | 2.88e-15 | 11 |
epithelium of gonad | 2.99e-10 | 2 |
gonad | 2.71e-08 | 21 |
indifferent external genitalia | 2.71e-08 | 21 |
indifferent gonad | 2.71e-08 | 21 |
gonad primordium | 2.71e-08 | 21 |
external genitalia | 6.08e-08 | 22 |
male organism | 6.08e-08 | 22 |
male reproductive system | 6.08e-08 | 22 |