FFCP PHASE1:Hg19::chr3:58235478..58235492,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr3:58235478..58235492,+ | |||
|id=chr3:58235478..58235492,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.67e-11!7;CL:0000586!2.67e-11!7;CL:0000181!1.45e-09!12;CL:0000417!1.45e-09!12;CL:0000668!1.45e-09!12;CL:0000414!1.45e-09!12;CL:0000412!1.45e-09!12;CL:0000182!1.45e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.70e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.88e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.43e-10;1 | |||
|ontology_enrichment_disease=DOID:3095!4.77e-08!22;DOID:2994!4.77e-08!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!8.53e-11!3;UBERON:0004054!8.53e-11!3;UBERON:0003135!6.14e-10!11;UBERON:0002368!4.30e-09!35;UBERON:0005057!1.51e-08!26;UBERON:0005904!3.45e-08!4;UBERON:0003296!6.28e-08!4;UBERON:0010133!6.28e-08!4;UBERON:0007023!6.63e-08!115;UBERON:0003101!6.84e-08!22;UBERON:0000079!6.84e-08!22;UBERON:0002107!8.24e-08!19;UBERON:0006925!8.24e-08!19;UBERON:0008836!8.24e-08!19;UBERON:0002530!1.31e-07!59;UBERON:0001905!1.84e-07!2;UBERON:0002757!1.84e-07!2;UBERON:0010134!1.84e-07!2;UBERON:0002784!1.84e-07!2;UBERON:0005408!1.84e-07!2;UBERON:0001899!1.84e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.97e-24;17!UBERON:0005409;5.62e-19;22!UBERON:0002108;1.41e-17;4!UBERON:0006947;2.63e-13;3!UBERON:0004054;2.63e-13;3!UBERON:0004921;1.79e-11;33!UBERON:0001000;1.19e-10;1!UBERON:0005352;1.19e-10;1!UBERON:0000998;1.43e-10;1!UBERON:0006868;1.43e-10;1!UBERON:0005904;3.30e-10;4!UBERON:0001155;9.72e-10;9!UBERON:0000059;4.67e-08;11!UBERON:0002107;7.58e-08;19!UBERON:0006925;7.58e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.77e-24,17;UBERON:0002108,1.41e-17,4;UBERON:0005409,9.72e-17,25;UBERON:0006947,2.63e-13,3;UBERON:0004054,2.63e-13,3;UBERON:0001000,1.19e-10,1;UBERON:0005352,1.19e-10,1;UBERON:0000998,1.43e-10,1;UBERON:0006868,1.43e-10,1;UBERON:0005904,3.30e-10,4;UBERON:0001155,8.75e-10,9;UBERON:0000059,4.29e-08,11;UBERON:0002107,8.01e-08,19;UBERON:0006925,8.01e-08,19;UBERON:0008836,8.01e-08,19;UBERON:0004921,1.40e-07,118;UBERON:0008835,8.97e-07,22;UBERON:0003894,8.97e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,7.08947888017685,0,2.21379189377604,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,2.76676685265672,1.79515288819544,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,28.3064206410685,3.05515072466813,0,0,0,0,0,0,0,0,0,9.07544126553598,27.8278646911927,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.709048640765013,0.494495150286999,0.741438982396034,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,3.46745112116472,0.577000469484979,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,10.6983130585,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0.212574920101683,1.36329340684902,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0.682986574053893,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,6.77419280305486,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,69.9197872457979,24.2601112159393,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,21.161073620616,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:58235478..58235492,+ | |||
}} |
Revision as of 19:25, 21 January 2014
Short description: | p@chr3:58235478..58235492, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:58235478..58235492, + |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.88e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.77e-24 | 17 |
small intestine | 1.41e-17 | 4 |
gastrointestinal system | 9.72e-17 | 25 |
male genital duct | 2.63e-13 | 3 |
internal male genitalia | 2.63e-13 | 3 |
vas deferens | 1.19e-10 | 1 |
spermatic cord | 1.19e-10 | 1 |
seminal vesicle | 1.43e-10 | 1 |
seminal fluid secreting gland | 1.43e-10 | 1 |
duct of male reproductive system | 3.30e-10 | 4 |
colon | 8.75e-10 | 9 |
large intestine | 4.29e-08 | 11 |
liver | 8.01e-08 | 19 |
digestive gland | 8.01e-08 | 19 |
liver bud | 8.01e-08 | 19 |
subdivision of digestive tract | 1.40e-07 | 118 |
hepatic diverticulum | 8.97e-07 | 22 |
liver primordium | 8.97e-07 | 22 |