FFCP PHASE1:Hg19::chr3:149192427..149192438,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7104 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11856 | |||
|TSSclassifier=weak | |||
|UniProt=P48230 | |||
|association_with_transcript=0bp_to_uc003exd.1_5end | |||
|coexpression_cluster_id=C794 | |||
|description=CAGE_peak_2_at_TM4SF4_5end | |||
|id=chr3:149192427..149192438,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.95e-07!12;CL:0000417!1.95e-07!12;CL:0000668!1.95e-07!12;CL:0000414!1.95e-07!12;CL:0000412!1.95e-07!12;CL:0000182!1.95e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.82e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.82e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.71e-15;13!UBERON:0004161;4.18e-12;11!UBERON:0006242;1.43e-09;1 | |||
|ontology_enrichment_disease=DOID:4468!3.29e-11!2;DOID:299!7.58e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!1.54e-19!25;UBERON:0000015!1.54e-19!25;UBERON:0002423!1.54e-19!25;UBERON:0006235!1.54e-19!25;UBERON:0004161!1.54e-19!25;UBERON:0008835!4.04e-18!22;UBERON:0003894!4.04e-18!22;UBERON:0009854!2.91e-17!23;UBERON:0007499!9.35e-16!25;UBERON:0009856!4.34e-15!26;UBERON:0003929!9.64e-14!54;UBERON:0005172!2.49e-13!55;UBERON:0005173!2.49e-13!55;UBERON:0002107!4.40e-13!19;UBERON:0006925!4.40e-13!19;UBERON:0008836!4.40e-13!19;UBERON:0004921!5.27e-13!129;UBERON:0004185!5.27e-13!129;UBERON:0005409!1.70e-12!35;UBERON:0005057!6.21e-12!26;UBERON:0002417!9.34e-12!61;UBERON:0000916!9.34e-12!61;UBERON:0001007!2.55e-11!155;UBERON:0001555!2.55e-11!155;UBERON:0007026!2.55e-11!155;UBERON:0000160!1.01e-10!27;UBERON:0004119!5.39e-10!169;UBERON:0000925!5.39e-10!169;UBERON:0006595!5.39e-10!169;UBERON:0005911!1.32e-09!82;UBERON:0005177!5.86e-09!107;UBERON:0002108!1.56e-08!14;UBERON:0000077!7.59e-08!130;UBERON:0002365!1.20e-07!31;UBERON:0002330!1.20e-07!31;UBERON:0001041!1.70e-07!98;UBERON:0002294!3.00e-07!7;UBERON:0001173!3.00e-07!7;UBERON:0004912!3.00e-07!7;UBERON:0009569!3.71e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;6.99e-25;25!UBERON:0002107;3.58e-20;19!UBERON:0006925;3.58e-20;19!UBERON:0002108;4.88e-15;4!UBERON:0002365;3.54e-12;31!UBERON:0002330;3.54e-12;31!UBERON:0000160;5.23e-11;17!UBERON:0002368;1.29e-10;33!UBERON:0005172;3.39e-09;52!UBERON:0005173;3.39e-09;52!UBERON:0005409;1.41e-08;22!UBERON:0001007;1.95e-08;81!UBERON:0000949;2.45e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,7.19e-25,25;UBERON:0000015,7.19e-25,25;UBERON:0002423,7.19e-25,25;UBERON:0006235,7.19e-25,25;UBERON:0004161,7.19e-25,25;UBERON:0008835,1.87e-22,22;UBERON:0003894,1.87e-22,22;UBERON:0009854,1.96e-21,23;UBERON:0002107,3.69e-20,19;UBERON:0006925,3.69e-20,19;UBERON:0008836,3.69e-20,19;UBERON:0007499,1.22e-19,25;UBERON:0009856,7.63e-19,26;UBERON:0002108,4.88e-15,4;UBERON:0003929,2.59e-13,54;UBERON:0002365,4.61e-12,31;UBERON:0002330,4.61e-12,31;UBERON:0000160,5.34e-11,17;UBERON:0005172,9.22e-11,54;UBERON:0005173,9.22e-11,54;UBERON:0004921,9.93e-11,118;UBERON:0002368,1.35e-10,35;UBERON:0000949,2.00e-10,45;UBERON:0005911,4.91e-10,82;UBERON:0001007,1.08e-09,145;UBERON:0001555,1.08e-09,145;UBERON:0007026,1.08e-09,145;UBERON:0002417,1.49e-09,60;UBERON:0000916,1.49e-09,60;UBERON:0004119,1.55e-08,160;UBERON:0000925,1.55e-08,160;UBERON:0006595,1.55e-08,160;UBERON:0005177,8.71e-08,101;UBERON:0005409,1.47e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,25.3510069643662,32.4332981503617,9.45263850690247,0,2.21379189377604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.72807587357917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.0378048745708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0,0,0,0,0,0,0,0,0.844501632511974,0,0,11.0850409055881,0,0,0,0,6.08671993897071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,5.71314828557017,0.282706142867882,0,0,23.0874243353715,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,16.4358805949301,0,0,0,18.7038547669541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,8.66161837329789,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6207752579179,15.9008266694666,0,0,9.92303659729111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90757005616546,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.1603105194503,0,0,0,0,0,0,0,0,0,0,48.5425454498972,2.40415516554353,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0,0,0,4.2322147241232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@TM4SF4 | |||
}} |
Revision as of 21:55, 21 January 2014
Short description: | p2@TM4SF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TM4SF4_5end |
Coexpression cluster: | C794_small_signet_adenocarcinoma_colon_Hepatocyte_gall_liver |
Association with transcript: | 0bp_to_uc003exd.1_5end |
EntrezGene: | TM4SF4 |
HGNC: | 11856 |
UniProt: | P48230 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.82e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 7.19e-25 | 25 |
anatomical boundary | 7.19e-25 | 25 |
hepatobiliary system | 7.19e-25 | 25 |
foregut-midgut junction | 7.19e-25 | 25 |
septum transversum | 7.19e-25 | 25 |
hepatic diverticulum | 1.87e-22 | 22 |
liver primordium | 1.87e-22 | 22 |
digestive tract diverticulum | 1.96e-21 | 23 |
liver | 3.69e-20 | 19 |
digestive gland | 3.69e-20 | 19 |
liver bud | 3.69e-20 | 19 |
epithelial sac | 1.22e-19 | 25 |
sac | 7.63e-19 | 26 |
small intestine | 4.88e-15 | 4 |
gut epithelium | 2.59e-13 | 54 |
exocrine gland | 4.61e-12 | 31 |
exocrine system | 4.61e-12 | 31 |
intestine | 5.34e-11 | 17 |
abdomen element | 9.22e-11 | 54 |
abdominal segment element | 9.22e-11 | 54 |
subdivision of digestive tract | 9.93e-11 | 118 |
endocrine gland | 1.35e-10 | 35 |
endocrine system | 2.00e-10 | 45 |
endo-epithelium | 4.91e-10 | 82 |
digestive system | 1.08e-09 | 145 |
digestive tract | 1.08e-09 | 145 |
primitive gut | 1.08e-09 | 145 |
abdominal segment of trunk | 1.49e-09 | 60 |
abdomen | 1.49e-09 | 60 |
endoderm-derived structure | 1.55e-08 | 160 |
endoderm | 1.55e-08 | 160 |
presumptive endoderm | 1.55e-08 | 160 |
trunk region element | 8.71e-08 | 101 |
gastrointestinal system | 1.47e-07 | 25 |