FFCP PHASE1:Hg19::chr3:152017924..152017952,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4154 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6923 | |||
|TSSclassifier=strong | |||
|UniProt=Q96RE3,E9PBW7,Q86UV8 | |||
|association_with_transcript=-30bp_to_ENST00000465907,ENST00000485509,ENST00000492948_5end | |||
|description=CAGE_peak_13_at_MBNL1_5end | |||
|id=chr3:152017924..152017952,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.00e-19!172;CL:0000566!1.00e-19!172;CL:0002032!8.39e-19!165;CL:0000837!8.39e-19!165;CL:0000738!7.97e-18!140;CL:0002087!2.57e-17!119;CL:0000988!3.28e-16!182;CL:0002031!1.51e-15!124;CL:0002057!2.06e-13!42;CL:0000860!6.51e-13!45;CL:0000763!1.34e-11!112;CL:0000049!1.34e-11!112;CL:0002009!5.35e-10!65;CL:0002194!2.18e-09!63;CL:0000576!2.18e-09!63;CL:0000040!2.18e-09!63;CL:0000559!2.18e-09!63;CL:0000766!4.58e-09!76;CL:0000557!4.70e-09!71;CL:0000134!4.92e-09!358;CL:0002320!8.08e-09!365;CL:0000839!1.18e-08!70;CL:0000542!1.97e-07!53;CL:0000051!1.97e-07!53;CL:0000838!5.08e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.21e-13;33!CL:0002057;6.21e-13;33!CL:0000473;4.52e-10;39!CL:0000234;4.52e-10;39!CL:0000576;4.68e-10;48!CL:0002087;3.49e-09;104!CL:0000624;1.45e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.89e-21,115;CL:0000738,1.05e-20,136;CL:0000037,2.81e-18,168;CL:0002031,4.12e-18,120;CL:0000860,4.33e-18,42;CL:0002057,4.33e-18,42;CL:0002032,1.27e-17,161;CL:0000837,1.27e-17,161;CL:0000473,1.25e-16,48;CL:0000234,1.25e-16,48;CL:0000988,3.85e-16,177;CL:0002009,6.73e-13,61;CL:0002194,6.72e-12,59;CL:0000576,6.72e-12,59;CL:0000040,6.72e-12,59;CL:0000559,6.72e-12,59;CL:0000557,9.48e-12,67;CL:0000766,2.05e-11,72;CL:0000839,1.72e-10,66;CL:0000763,4.04e-10,108;CL:0000049,4.04e-10,108;CL:0000134,6.82e-09,354;CL:0002320,1.36e-08,361;CL:0000542,6.02e-08,53;CL:0000051,6.02e-08,53;CL:0000624,1.83e-07,6;CL:0000838,2.39e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;7.91e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.95e-10!102;UBERON:0003061!1.95e-10!102;UBERON:0002193!1.42e-09!112;UBERON:0002384!1.20e-08!375;UBERON:0002371!1.40e-08!80;UBERON:0001474!2.22e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.16e-13,98;UBERON:0003061,8.16e-13,98;UBERON:0002193,2.75e-12,108;UBERON:0002371,7.79e-12,76;UBERON:0002405,1.81e-11,93;UBERON:0001474,4.14e-10,82;UBERON:0001434,5.59e-09,100;UBERON:0004765,7.19e-09,90;UBERON:0002384,2.73e-08,371 | |||
|phase1_expression=1.09007027562334,2.99740733447376,0.986680828671798,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.866364470720326,0.662794751455832,0.672325146451775,0.602694528023977,2.92124036154949,0.487932798790507,0.123121058076788,0,0,0.572471974262113,0.547497700291537,0.376627918784408,0.687720651731561,0.656804715599566,0.629686250509434,0.786728553697808,0.767658796194425,0.154816123316076,0,0,0.369754010166788,0.46480320348181,0.710846162437108,0.880801318004542,0,2.80762226458198,2.17010870715852,0.895661896959697,0,0,2.4717700592526,2.64513160582167,1.94067248950253,2.32429036905685,0.411167888021826,1.85823822537062,1.1507695692886,1.2808035326455,1.18241114944293,2.41321976515633,0.645484683583826,1.35426486594342,2.07066573496865,1.36453075028923,1.12361742222542,1.83650335422542,0,2.55734850319616,1.31940520074686,0.997318288108159,0.852449501065388,7.54544020434318,1.13477044938228,2.4912889959823,2.51248665256743,4.17186334736161,1.08594422352558,7.87019353423379,1.10483290796269,3.48108626184973,1.69004229049553,1.4882300997553,1.25795187305026,0.786300418025466,0.750884464207532,0.64290234678832,0.570025487482497,1.59133341759272,1.27864907635244,0,2.18455444504853,0,1.70692089026603,0.800791974072025,1.14950487990897,0.661044872784862,0.954053754535364,1.70763890732835,3.52342313622563,1.14681968437569,1.32171328579026,0.560508562981536,1.31692042387539,1.180258620683,9.43225830597995,2.87842098599313,1.17030546773475,2.60737813306872,3.78758244587787,1.94826728407911,1.00269411196656,2.3568472597987,2.87994062958707,1.35401931882508,1.79327847615945,1.69077151827842,1.47994114143309,1.38175008892924,1.15921234294021,1.63115219478266,3.47803076516627,2.09071047609954,0.906474741580529,3.44898444241729,2.06176467289578,2.02415753615602,0,0,0,1.50575119077773,0.255973222308837,0,0.473554504088034,0.821127996921047,1.00803371612366,8.29064606928873,3.33096128930438,0,0,0,0.722878304769133,0.50133791063589,0.869079113764942,0,0,0.567208902984407,0.443458794925128,0.614843499851882,0.327447688744282,0,0,0,0.348259474598534,0.930705723632056,0.953962497221368,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0.825354125820202,0.417989933073621,1.29208379584664,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,1.62028389576352,1.42879565254528,0.673588117878509,0.563057402416611,0,0,0.732806975721629,1.31780417436063,0,0,0.496971951695318,1.01304409331664,0.529636723252875,1.14734648299525,1.41867352879343,0.560677600142307,0,0.24666754841716,0,0.942974704487816,0,0,0,0,0.312160076830321,0,0.597794722207204,0.822041490506354,0.809364721840658,0.140450806702248,0,1.84251475967652,0.723280468230358,0,1.97813543422845,0,0,1.17835279767846,1.37630371859161,0,0,0.919463387397059,0.150238058906597,0.567160915800105,1.4351170855109,0.213557388818567,1.05965950579781,0.600182192168805,0.515262646192195,0.515281080091258,0.558350568994769,0.337552664482532,0.194874010322397,0.504867548488229,0.184099797284599,0.323292113637624,0.710019185033229,0.503760491138201,0,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,0,1.92972281457866,0,1.39310378409594,1.44375896333917,0.118306800039844,0.505754070234305,0.482022059766964,0.882351781859152,0.217879444092406,0.237270619111097,0.404493924480493,0.392442930250692,0,0.738155454624648,0,0.4115740113314,0,0,1.96565443335525,0.590789906681404,0.882926198829301,0.491953754172454,0.171567810298526,0.109750285408626,0,0.502644862058154,0.185176890317059,0,0,1.44331342025273,0.115930404975077,0.234817388471643,1.01056513432752,0,0.380508304469197,0.790204397959275,0.858486162094873,1.23108503043699,0,0.891786973732369,0,0.16798212819886,0,0.179117045405697,0,0.383382679165211,2.46331618947972,0.528290604079356,0.207328115540772,0.432359860250884,0.12624243342638,0.190493682876507,0,0,0,0.205654985406647,0.300343057843917,0.571652865261156,0.112131084345361,0,0.51336800074665,0.646358578788889,0,0,0.26593811658487,0,0.257207374262142,0,0,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0.899756920638513,1.2162378064119,0,0,0.239624855491583,0,0,0.868687840005475,2.4657158706046,0.537182889719687,1.00876629594175,0.591092280605782,4.74380664690938,2.95188983443421,0,0,0,0.167516265334349,0,5.99205619157746,11.966458368161,0,0.24538298343828,1.50051156317903,0.271265023699736,0.623912584592421,4.46072471992904,0,0.468565659970853,0,0,0,0,0.368738337083406,1.39013783148933,0,0,1.24060815673732,3.23571301227925,2.13455115606889,0,0,0.30239029332968,1.24053903909388,0.153461973288062,1.68396056659844,0.384417447767103,0,1.44768529029247,0,1.54209693802656,0.355123450626254,0.410635780069046,1.03850885836724,0.929683027679674,0.483437798366489,1.00253235151642,0.276242966807689,0.229628896329213,2.36718518408732,1.31124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0.223874754722178,0.438519753291869,0.261435451024901,0,0,0,0.515205058238611,0.366277859273374,0.247528499761764,0,0.650060246036521,1.6068392984416,0.096670718292122,0.924291702687866,0.614014698904518,0.689182862422653,0.322260734604821,1.30515024522806,0.426133137080504,0,0.991709492165869,0.768760269460425,0.382838137483752,0.6069466851333,1.39453664789186,0.31481234683064,1.3940745403212,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0.706874414074119,0,0,0,0,0.487426979262569,0,0.409499734223957,0.989838023675989,0,0,0,1.31535265576129,0,0.655894752046633,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0.709522128141196,1.05553817648832,0.329294892959902,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0.569647187174163,0.476463550915578,0.822724546172388,0.648473311192717,1.08006287447623,3.17250070517708,0,0,0.245040215981032,2.60124445176006,0,0.711418433484141,3.02909918184762,1.1974762285969,0.957526850661834,1.48171507906718,0.649243880549111,1.12318871245384,0.912938716132769,1.09675927041116,0,1.35433422241283,1.1241165257259,1.81619736471943,0.851692475380653,0.687010689511529,0.614481528616916,1.11838053946208,0.333698283423817,0.781552381608161,0.278406173895242,0,0.811367035427949,0.66614393599564,0,0.561421621224659,0.879049075631364,0.242721043499027,0.891547074219827,0,0.47748896947538,0,1.22864280839693,0,0.984685914873589,0.667852230137435,0.988823245360557,0,1.9924798825107,0.828851746593443,0,0.102268682502155,1.23084805461069,3.73247505194169,0.179736702294654,0.716084698702437,1.02314474045374,1.28236427328014,4.7896618469388,1.11136990144637,0,0.185536196323703,0,0.260427761085233,0.174919999992391,0,0.568967241427498,1.01701460117107,0.472775363535873,0.344743373241465,1.16641845353302,1.21537496453305,0.885741385813839,0.723578631752448,0,0.221158519862449,0.295547618953547,0.219385397153973,0.32681539055697,0.139423744278603,0.615602068030377,0.341826167541004,0.23056390438806,0.269272933229316,0.108647371922008,0.31900115973192,0.915975934018623,1.06606955203727,2.04386596391473,0.941881538370149,1.32969345520125,0.902382642468723,0.980312671588698,0.671286347903371,0.569261198172555,0.476809736941136,0.843992258112108,0.652931232636591,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0,0.417687798021821,0.067401132980677,1.60515529459758,0.234264445725339,5.83855325490131,0.586993856796269,0,0.789168805698781,1.20990716048664,0.91821828489147,0.695052375913368,0,0.103688191397247,0,1.323967823502,0.313932918407225,0,0,0.554698692052555,0.694238953340524,0.0979923974143777,0.174118413160805,0.698906672968121,0.343972064943233,0.387025325156341,0.730893170861856,0.492692742319255,0.678923115418936,0.0882561266915003,0.90392296312213,0.411125773940253,0.397429223405979,0.379864775735272,1.17330829640882,0.320635281006135,0.426905989478705,1.19885765749278,0.288180834308212,0.114536596165916,1.54435498075768,1.4405479798815,0.248505071130865,0.942776138467182,0.67952103036807,0.313808538937,0.713987523454252,0.288950589901519,0.600420288709789,0.273810757783986,0,0.429765441419957,0.525774708558629,1.11712960508902,0.687481272035051,0,0.399358000997982,0.429226048136571,0,0.134366944973453,0.360299883542404,0,0.0787831823072236,0.741742725430498,0.606631894687664,0.492137407573744,0.846733320657845,0,0.817220436669454,0,0.137539436597234,1.24632101408756,1.1248694577575,1.5476039091159,0.182248669974074,0,0.472834243795189,0.262272940674991,0.105600336519406,0.35857467866569,0.383830394638891,2.1440859791201,1.32418394073086,1.017074150619,2.71499800876856,1.72844298240254,0.979762080328227,1.19730191562487,0.574647645245373,0.681552087141687,0.113312091520126,0.146552233678082,0,0.387848869084652,0.66116300871345,0,0,0.747511887973863,0.157204305099666,2.07119527673598,2.48083010905975,0.197611631897944,1.09613338542806,0,0,0.2506898940227,0,0,0.157054096250234,0,3.66078794705889,0.751145584238999,0,0.332787154610557,0,0.276697269872462,0.74988244777264,0.151649117541648,0.285465333544967,0.705797459094515,0.468334905806882,0.434763085832475,0.74627401443437,0.701139929541673,0,1.13641803165053,1.0062716070103,0,0.686520205190771,1.05861646634267,1.24349760466224,0.443565449968902,0.63718706865481,0.449803112163605,0.776314784381297,1.24411862352257,0.797525143673985,0.521745061811734,0.901545653983311,1.52322084867518,0,1.09109195521536,0.537052785212442,0.464033759878494,1.19428766609585,1.20008329398946,1.37358282073117,1.34699795506368,0,0,0.857766365499703,0.260994291965212,1.13352962756136,0.463044948647668,1.22368352253234,0.537266523244462,0.617602894321944,0.219284049578707,0.176689145945881,0.38582807654183,0.675769762612291,0.256241518587947,0,0.303859956177382,0.414775308455192,1.7537427795545,0.664324201566815,0.981392365535065,0.982829546539238,1.47463745252232,0.211312123358627,0.19998739585493,0.533458648470704,2.06657975592979,0,0.552317850755522,0,0,0,0,0,0.218419276384028,1.86705782949428,1.06287460050841,0.619678821295011,0,0.636008701306837,0.630893960010027,0,0.705351887381368,1.2249819094128,0.256916900385838,0,0.478901577171454,0.615349092722265,0.756215088665154,0.0691572524642179,1.29180516505481,0,0.785181748008205,0,0.917142992608395,0.808679663052368,0.762764190934334,0,0.198916222116275,0.451261970095544,0.20170506870352,0.781514011233092,0,2.94789451518174,0.295712172434091,0.202612753855184,0,0.620060389503552,0,1.09394961803644,0,5.45832296228224,0.351742488719241,1.02209942111676,0,0.672567444437648,0.606965604236632,0.455324382702595,0,1.03710588800201,0.685952037749674,0.135939465953663,0.131545547125698,0.945550727071746,0.556157009460346,0.078493092850514,0.785577949580009,0,1.82631744101899,1.51149313853035,2.38875843943525,0.285906176706625,0,0.116241425368125,0.173858272302579,1.60342272946051,0.207216164163037,0.6828739083758,1.38251932362818,0.430227358820278,0.828324005113957,0.766920642832419,0.846774100381858,0.4582137370881,0.62041277132864,1.91107787795487,0.559277158988962,0.294450700845729,0.243835849964539,1.94228651156368,0.102662806856247,0,0.971421986118279,0.233939463462106,0.795803100645473,0,0.22589216407792,0.109940516745429,0.150962843566674,0.154348316215889,1.09279780251979,0.470317296361523,4.6578181133242,0,0.785233868459781,0,0,0.849635573439084,0.657887425858975,0.128915775947154,0.89947040332436,0.178553938605658,0.705789743431384,0.882655033580851,0.730336388246517,1.37618785021362,0.286679166302903,0.788857810965923,0,0.436350690340377,2.1161073620616,3.34795516350076,0.924351257262837,1.73050624849516,0.126166424835079,0,0.126698501011437,0,0,0.0918948995348449,0.250707539292375,0.303114792872958,0.267964130156178,1.65833887891756,0.827463966895162,0.426467963801962,0.952257725854961,1.35636710655613,0.558672428662721,0.448527450322454,0.190941474834495,0.808468755832877,2.8303177226605,1.36893320434112,0.202056159043763,0.215166616178029,0.99798106963804,0.162806537221949,0.747091421144008,0,0.179650404213174,0,0.611207220914332,2.03448089157869,0.665756774185513,1.81146414231924,0.320568492303233 | |||
|short_description=p13@MBNL1 | |||
}} |
Revision as of 22:06, 21 January 2014
Short description: | p13@MBNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MBNL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000465907, ENST00000485509, ENST00000492948_5end |
EntrezGene: | MBNL1 |
HGNC: | 6923 |
UniProt: | Q96RE3E9PBW7Q86UV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 4.89e-21 | 115 |
leukocyte | 1.05e-20 | 136 |
hematopoietic stem cell | 2.81e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 4.12e-18 | 120 |
classical monocyte | 4.33e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.33e-18 | 42 |
hematopoietic oligopotent progenitor cell | 1.27e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-17 | 161 |
defensive cell | 1.25e-16 | 48 |
phagocyte | 1.25e-16 | 48 |
hematopoietic cell | 3.85e-16 | 177 |
macrophage dendritic cell progenitor | 6.73e-13 | 61 |
monopoietic cell | 6.72e-12 | 59 |
monocyte | 6.72e-12 | 59 |
monoblast | 6.72e-12 | 59 |
promonocyte | 6.72e-12 | 59 |
granulocyte monocyte progenitor cell | 9.48e-12 | 67 |
myeloid leukocyte | 2.05e-11 | 72 |
myeloid lineage restricted progenitor cell | 1.72e-10 | 66 |
myeloid cell | 4.04e-10 | 108 |
common myeloid progenitor | 4.04e-10 | 108 |
mesenchymal cell | 6.82e-09 | 354 |
connective tissue cell | 1.36e-08 | 361 |
lymphocyte | 6.02e-08 | 53 |
common lymphoid progenitor | 6.02e-08 | 53 |
CD4-positive, alpha-beta T cell | 1.83e-07 | 6 |
lymphoid lineage restricted progenitor cell | 2.39e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.16e-13 | 98 |
blood island | 8.16e-13 | 98 |
hemolymphoid system | 2.75e-12 | 108 |
bone marrow | 7.79e-12 | 76 |
immune system | 1.81e-11 | 93 |
bone element | 4.14e-10 | 82 |
skeletal system | 5.59e-09 | 100 |
skeletal element | 7.19e-09 | 90 |
connective tissue | 2.73e-08 | 371 |