FFCP PHASE1:Hg19::chr3:168991209..168991221,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_at_chr3:168991209..168991221,- | |||
|id=chr3:168991209..168991221,- | |||
|ontology_enrichment_celltype=CL:0002563!5.32e-09!4;CL:0000313!9.91e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.22e-13;4!CL:0002253;1.32e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.11e-13,4;CL:0002253,1.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.61e-13;1 | |||
|ontology_enrichment_disease=DOID:2152!9.91e-09!1;DOID:299!1.23e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;9.25e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.25e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!2.29e-26!27;UBERON:0000059!3.38e-25!11;UBERON:0005409!2.38e-24!35;UBERON:0001155!8.37e-22!9;UBERON:0004907!1.33e-14!5;UBERON:0004921!2.48e-12!129;UBERON:0004185!2.48e-12!129;UBERON:0001007!3.24e-11!155;UBERON:0001555!3.24e-11!155;UBERON:0007026!3.24e-11!155;UBERON:0004119!4.95e-10!169;UBERON:0000925!4.95e-10!169;UBERON:0006595!4.95e-10!169;UBERON:0001154!4.54e-09!1;UBERON:0001153!4.54e-09!1;UBERON:0001242!5.32e-09!4;UBERON:0001262!5.32e-09!4;UBERON:0004786!5.32e-09!4;UBERON:0004808!5.32e-09!4;UBERON:0001277!5.32e-09!4;UBERON:0002171!6.22e-09!1;UBERON:0006518!6.22e-09!1;UBERON:0008949!6.22e-09!1;UBERON:0000101!6.22e-09!1;UBERON:0002167!6.22e-09!1;UBERON:0001052!9.20e-09!4;UBERON:0004911!9.91e-09!1;UBERON:0003350!2.31e-07!5;UBERON:0001046!9.23e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.47e-54;17!UBERON:0005409;1.56e-42;22!UBERON:0001155;2.74e-34;9!UBERON:0000059;4.43e-28;11!UBERON:0004921;1.67e-26;33!UBERON:0002108;7.65e-23;4!UBERON:0001242;1.22e-13;4!UBERON:0001262;1.22e-13;4!UBERON:0004786;1.22e-13;4!UBERON:0004808;1.22e-13;4!UBERON:0001277;1.22e-13;4!UBERON:0001154;1.61e-13;1!UBERON:0001153;1.61e-13;1!UBERON:0009854;1.61e-13;1!UBERON:0004907;7.32e-11;5!UBERON:0001555;3.27e-10;54!UBERON:0000485;3.51e-08;7!UBERON:0003929;3.51e-08;7!UBERON:0001007;5.51e-08;81!UBERON:0003350;2.91e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.14e-54,17;UBERON:0005409,1.31e-37,25;UBERON:0001155,1.87e-34,9;UBERON:0000059,3.25e-28,11;UBERON:0002108,8.56e-23,4;UBERON:0001242,1.11e-13,4;UBERON:0001262,1.11e-13,4;UBERON:0004786,1.11e-13,4;UBERON:0004808,1.11e-13,4;UBERON:0001277,1.11e-13,4;UBERON:0004921,1.49e-13,118;UBERON:0001154,1.61e-13,1;UBERON:0001153,1.61e-13,1;UBERON:0001045,1.61e-13,1;UBERON:0004907,6.80e-11,5;UBERON:0001007,9.19e-11,145;UBERON:0001555,9.19e-11,145;UBERON:0007026,9.19e-11,145;UBERON:0004119,1.30e-09,160;UBERON:0000925,1.30e-09,160;UBERON:0006595,1.30e-09,160;UBERON:0011216,1.34e-07,223;UBERON:0003350,2.77e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18160691046586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2632051389738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8165329287164,0,1.99052386215701,4.42287822516696,2.4441205797345,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,3.13070500632772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13395422361945,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02652102730598,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,17.1904274225,0,0,0,0,0,0,0,0,0,0,3.55001127296545,2.18559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:168991209..168991221,- | |||
}} |
Revision as of 22:29, 21 January 2014
Short description: | p@chr3:168991209..168991221, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:168991209..168991221, - |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.11e-13 | 4 |
epithelial cell of large intestine | 1.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.14e-54 | 17 |
gastrointestinal system | 1.31e-37 | 25 |
colon | 1.87e-34 | 9 |
large intestine | 3.25e-28 | 11 |
small intestine | 8.56e-23 | 4 |
intestinal mucosa | 1.11e-13 | 4 |
wall of intestine | 1.11e-13 | 4 |
gastrointestinal system mucosa | 1.11e-13 | 4 |
gastrointestinal system epithelium | 1.11e-13 | 4 |
intestinal epithelium | 1.11e-13 | 4 |
subdivision of digestive tract | 1.49e-13 | 118 |
vermiform appendix | 1.61e-13 | 1 |
caecum | 1.61e-13 | 1 |
midgut | 1.61e-13 | 1 |
lower digestive tract | 6.80e-11 | 5 |
digestive system | 9.19e-11 | 145 |
digestive tract | 9.19e-11 | 145 |
primitive gut | 9.19e-11 | 145 |
endoderm-derived structure | 1.30e-09 | 160 |
endoderm | 1.30e-09 | 160 |
presumptive endoderm | 1.30e-09 | 160 |
organ system subdivision | 1.34e-07 | 223 |
epithelium of mucosa | 2.77e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.25e-08 | 2 |