FFCP PHASE1:Hg19::chr4:1166954..1166973,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |||
|TSSclassifier=strong | |||
|UniProt=D6REX2 | |||
|association_with_transcript=0bp_to_ENST00000514490_5end | |||
|coexpression_cluster_id=C477 | |||
|description=CAGE_peak_13_at_SPON2_5end | |||
|id=chr4:1166954..1166973,- | |||
|ontology_enrichment_celltype=CL:0000136!4.21e-12!15;CL:0002334!2.51e-10!12;CL:0000325!1.25e-08!39;CL:0000057!6.92e-08!75;CL:0000055!2.14e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.40e-33;13!CL:0002521;9.98e-13;3!CL:0002504;7.86e-12;3!CL:1000279;7.86e-12;3!CL:0002615;7.86e-12;3!CL:1000280;7.86e-12;3!CL:0002367;2.32e-09;2!CL:0002195;1.90e-08;2!CL:0002571;1.90e-08;2!CL:0002617;1.90e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.82e-34,15;CL:0002521,5.79e-13,3;CL:0002615,5.53e-12,3;CL:0002504,8.40e-12,3;CL:1000279,8.40e-12,3;CL:1000280,8.40e-12,3;CL:0002367,2.11e-09,2;CL:0002617,1.52e-08,2;CL:0002195,2.79e-08,2;CL:0002571,2.79e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.91e-08!365;UBERON:0003688!4.71e-08!6;UBERON:0002358!4.71e-08!6;UBERON:0003684!4.71e-08!6;UBERON:0001178!4.71e-08!6;UBERON:0002072!5.91e-07!5;UBERON:0000063!6.63e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;9.98e-13;3!UBERON:0001013;1.25e-09;14!UBERON:0005969;2.32e-09;2!UBERON:0003956;2.32e-09;2!UBERON:0002072;8.49e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,5.79e-13,3;UBERON:0001013,1.16e-09,14;UBERON:0005969,2.11e-09,2;UBERON:0003956,2.11e-09,2;UBERON:0002072,6.18e-08,5;UBERON:0002331,9.21e-07,10;UBERON:0000358,9.21e-07,10;UBERON:0000307,9.21e-07,10;UBERON:0000091,9.21e-07,10;UBERON:0000087,9.21e-07,10;UBERON:0007010,9.21e-07,10;UBERON:0007806,9.21e-07,10;UBERON:0008780,9.21e-07,10;UBERON:0005728,9.21e-07,10 | |||
|phase1_expression=1.99846217197612,1.07050261945492,1.9733616573436,1.0007329835313,1.78784437770915,0,5.06599756336621,1.89515962028049,2.61185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,1.15235184896,0,1.24864030732128,0.570471821544449,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.723280468230358,1.18800285728205,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0.206105058476878,0,0.37223371266318,0,0,0,0,0.80823028409406,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,2.16563844500876,0.236613600079688,0.168584690078102,0,0.330881918197182,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0.190493682876507,0.763976851116555,1.17217447210047,0,0.411309970813294,0.901029173531752,0,0.112131084345361,0,0,1.80980402060889,10.7296933755565,0,2.39344304926383,5.2003718455683,0,0,0,1.42977993658148,65.1145926469732,2.46972101034231,0.325736184293735,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0.831883446123229,0,0,0,0,0,2.0694614258501,0,0,0.868836144680828,0.587403472388222,0,0,0,0,0,0,0,1.24053903909388,0.153461973288062,0.280660094433074,0.768834895534206,0.511707249066704,0.64341568457443,1.48418066444991,0.154209693802656,0.532685175939381,0.492762936082855,0,0.929683027679674,0,0,0,0.459257792658427,0.546273504020151,4.58935452357984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.644521469209642,0.435050081742686,0,0.267096106940212,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0,0,0.767693373934002,1.71175595213568,0,0,1.43897966066652,1.37268514868027,1.17812402345686,0,0,0,1.46290121726877,0,0,0,1.97967604735198,0,0,0,0,0.578775534266688,1.31178950409327,0,0.30982349809975,0,0.573645408816206,1.27723753317057,0,0,0.211107635297664,0,2.65631221636001,5.24902080367474,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10579259931225,0.886642856860642,0,0,0,0.307801034015188,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.640358984218058,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,1.63205341010842,1.0027595760908,1.83807346058077,0,0,0,0,0,0,0.110929051536852,0,0.553394539744923,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,1.76097531226803,2.66943366478961,0,0.756154618816195,0,0,0.159296767163702,0,0.155262956876259,0,0,1.04349012362347,0,0,0,0,0.107410557042488,0.464033759878494,0.398095888698616,0,1.03018711554838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7562092961788,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,1.48863353516788,0,0,2.14280734351315,0.672567444437648,0,0,0.443511850813194,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0,0,0,0.980593287015622,0,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,2.77305377178851,1.29787968637137,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0.23806443146374,0.0645889098360061,0,0,0,0.202117188958219,0.653150243690884,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,9.38563769613817,0.122241444182866,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p13@SPON2 | |||
}} |
Revision as of 23:47, 21 January 2014
Short description: | p13@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SPON2_5end |
Coexpression cluster: | C477_Mesenchymal_Amniotic_Placental_chorionic_umbilical_Cardiac_acute |
Association with transcript: | 0bp_to_ENST00000514490_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | D6REX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.82e-34 | 15 |
subcutaneous fat cell | 5.79e-13 | 3 |
adipocyte of omentum tissue | 5.53e-12 | 3 |
enteric smooth muscle cell | 8.40e-12 | 3 |
smooth muscle cell of large intestine | 8.40e-12 | 3 |
smooth muscle cell of colon | 8.40e-12 | 3 |
trabecular meshwork cell | 2.11e-09 | 2 |
adipocyte of breast | 1.52e-08 | 2 |
hepatic stem cell | 2.79e-08 | 2 |
hepatic mesenchymal stem cell | 2.79e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 5.79e-13 | 3 |
adipose tissue | 1.16e-09 | 14 |
reticulum trabeculare | 2.11e-09 | 2 |
aqueous drainage system | 2.11e-09 | 2 |
hypodermis | 6.18e-08 | 5 |
umbilical cord | 9.21e-07 | 10 |
blastocyst | 9.21e-07 | 10 |
blastula | 9.21e-07 | 10 |
bilaminar disc | 9.21e-07 | 10 |
inner cell mass | 9.21e-07 | 10 |
cleaving embryo | 9.21e-07 | 10 |
connecting stalk | 9.21e-07 | 10 |
inner cell mass derived epiblast | 9.21e-07 | 10 |
extraembryonic mesoderm | 9.21e-07 | 10 |