FFCP PHASE1:Hg19::chr4:160024932..160024956,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9693 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16854 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-373bp_to_ENST00000505478_5end | |||
|description=CAGE_peak_10_at_RAPGEF2_5end | |||
|id=chr4:160024932..160024956,+ | |||
|ontology_enrichment_celltype=CL:0002274!8.13e-07!5;CL:0000457!8.13e-07!5;CL:0002191!8.13e-07!5;CL:0000097!8.13e-07!5;CL:0000831!8.13e-07!5;CL:0002028!8.13e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;7.70e-67;5!CL:0000775;1.96e-40;3!CL:0000163;3.06e-37;9!CL:0000094;1.28e-15;8!CL:0000151;5.77e-12;36!CL:0000081;1.58e-11;11!CL:0000047;8.04e-08;2!CL:0000764;8.04e-08;2!CL:0000558;8.04e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.24e-67,5;CL:0002028,8.24e-67,5;CL:0000775,1.96e-40,3;CL:0000163,3.18e-37,9;CL:0000094,1.28e-15,8;CL:0000151,3.32e-13,36;CL:0000081,1.58e-11,11;CL:0000766,5.40e-11,72;CL:0000763,5.78e-09,108;CL:0000049,5.78e-09,108;CL:0000764,8.04e-08,2;CL:0000765,8.04e-08,2;CL:0000050,8.04e-08,2;CL:0000038,8.04e-08,2;CL:0000558,8.04e-08,2;CL:0000547,8.04e-08,2;CL:0000549,8.04e-08,2;CL:0000550,8.04e-08,2;CL:0000552,8.04e-08,2;CL:0000839,7.04e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;4.73e-15;1!DOID:4549;4.73e-15;1!DOID:5861;4.73e-15;1!DOID:6496;4.73e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.73e-15,1;DOID:4549,4.73e-15,1;DOID:5861,4.73e-15,1;DOID:6496,4.73e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-09!115;UBERON:0002619!1.29e-08!22;UBERON:0001950!1.65e-08!20;UBERON:0000956!8.61e-08!25;UBERON:0000203!8.61e-08!25;UBERON:0001869!1.44e-07!32;UBERON:0001893!2.34e-07!34;UBERON:0002780!3.98e-07!41;UBERON:0001890!3.98e-07!41;UBERON:0006240!3.98e-07!41;UBERON:0002616!5.63e-07!59;UBERON:0003080!8.62e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.786728553697808,0,0,0,0,0,0.0774672005803016,0.142169232487422,0.587200878669695,0,0.200544447470142,0.868043482863407,0.447830948479849,0,0,0.145398238779565,0.755751887377619,0.485168122375632,0,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0,0,0,0.376484679085209,0,0,0.306083892370903,0.641858054152187,0,0,0.398927315243264,0.426224750532694,0.870627715885752,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0.211255286311942,0,0.419317291016752,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68725489096526,0,0,0.651083453856419,0,0,0.255973222308837,0,0.236777252044017,0,0.604820229674197,0.802320587350522,0.434473211648397,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0.132957960518865,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.488124115096339,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0,0,0.710019185033229,0,0.169560592310488,0.193260853163297,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38994856843915,2.28925928434388,6.21984346622316,6.62951785718023,6.43836410474538,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0.508189248444927,1.30139853857622,0,0,0,4.49404214368309,5.9832291840805,3.31532410748828,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0.877039506583738,1.3071772551245,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,2.88743956579008,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0.970884173996107,0,0,0,0.296964680832639,0.307160702099232,0,0.140669416410513,0.222617410045812,0.329607748453519,0,0,0,0,0.306806047506464,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0.347249989866585,0,0,0,0.331737779793674,0.591095237907095,0.87754158861589,0,0.278847488557207,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.635746315921515,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0,0,0.173559738335131,0.195984794828755,0,0,0,0,0.146178634172371,0.164230914106418,0.0969890164884194,11.9145771033525,0,0,0,0.316553979779393,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0.572682980829578,0,0,0.124252535565433,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0.446342914883745,0.940568614814168,0,0,0,0,0.0674035438541849,0,0,0,0.681017030557878,0,0,0,0.2249738915515,0.77380195455795,0.850493793212345,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0.293104467356165,0,0,0,0,0,0.320362237703084,0.314408610199332,0,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.332787154610557,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.127894371303652,0,0,0,0,0,0.247871528518004,0,0.318004350653419,0.157723490002507,0.80057074828547,0,0,0.256916900385838,1.41696576325585,0.319267718114302,0.82046545696302,0.504143392443436,0.414943514785307,0.322951291263702,0,0.0981477185010256,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p10@RAPGEF2 | |||
}} |
Revision as of 03:46, 22 January 2014
Short description: | p10@RAPGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RAPGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -373bp_to_ENST00000505478_5end |
EntrezGene: | RAPGEF2 |
HGNC: | 16854 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.24e-67 | 5 |
basophil mast progenitor cell | 8.24e-67 | 5 |
neutrophil | 1.96e-40 | 3 |
endocrine cell | 3.18e-37 | 9 |
granulocyte | 1.28e-15 | 8 |
secretory cell | 3.32e-13 | 36 |
blood cell | 1.58e-11 | 11 |
myeloid leukocyte | 5.40e-11 | 72 |
myeloid cell | 5.78e-09 | 108 |
common myeloid progenitor | 5.78e-09 | 108 |
erythroid lineage cell | 8.04e-08 | 2 |
erythroblast | 8.04e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 8.04e-08 | 2 |
erythroid progenitor cell | 8.04e-08 | 2 |
reticulocyte | 8.04e-08 | 2 |
proerythroblast | 8.04e-08 | 2 |
basophilic erythroblast | 8.04e-08 | 2 |
polychromatophilic erythroblast | 8.04e-08 | 2 |
orthochromatic erythroblast | 8.04e-08 | 2 |
myeloid lineage restricted progenitor cell | 7.04e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.73e-15 | 1 |
extraosseous chondrosarcoma | 4.73e-15 | 1 |
myxoid chondrosarcoma | 4.73e-15 | 1 |
extraskeletal myxoid chondrosarcoma | 4.73e-15 | 1 |