FFCP PHASE1:Hg19::chr4:166513830..166513834,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C414 | |||
|description=CAGE_peak_at_chr4:166513830..166513834,+ | |||
|id=chr4:166513830..166513834,+ | |||
|ontology_enrichment_celltype=CL:0002617!4.04e-20!2;CL:0000174!7.92e-14!3;CL:0002174!4.15e-11!1;CL:0000501!4.15e-11!1;CL:0002557!5.57e-11!1 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.84e-14;12!CL:0002548;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.75e-14,12;CL:0002548,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.81e-15;11!UBERON:0009497;2.94e-13;13 | |||
|ontology_enrichment_disease=DOID:5662!3.08e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:5662;1.81e-40;1!DOID:3307;5.15e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.48e-40,1;DOID:3307,3.81e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0001282!2.53e-11!1;UBERON:0009842!2.53e-11!1;UBERON:0003704!2.53e-11!1;UBERON:0001171!2.53e-11!1;UBERON:0001172!2.53e-11!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;6.62e-41;1!UBERON:0009842;6.62e-41;1!UBERON:0003704;6.62e-41;1!UBERON:0001171;6.62e-41;1!UBERON:0001172;6.62e-41;1!UBERON:0001280;1.22e-14;3!UBERON:0004647;1.22e-14;3!UBERON:0002394;2.53e-11;4!UBERON:0003928;2.53e-11;4!UBERON:0002107;2.12e-09;19!UBERON:0006925;2.12e-09;19!UBERON:0002423;2.24e-07;25!UBERON:0002294;5.08e-07;7!UBERON:0001173;5.08e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,6.62e-41,1;UBERON:0009842,6.62e-41,1;UBERON:0003704,6.62e-41,1;UBERON:0001171,6.62e-41,1;UBERON:0001172,6.62e-41,1;UBERON:0001280,1.22e-14,3;UBERON:0004647,1.22e-14,3;UBERON:0005171,1.22e-14,3;UBERON:0002107,2.08e-09,19;UBERON:0006925,2.08e-09,19;UBERON:0008836,2.08e-09,19;UBERON:0008835,2.93e-08,22;UBERON:0003894,2.93e-08,22;UBERON:0002394,5.54e-08,6;UBERON:0003928,5.54e-08,6;UBERON:0009854,6.08e-08,23;UBERON:0007499,2.20e-07,25;UBERON:0009497,2.20e-07,25;UBERON:0000015,2.20e-07,25;UBERON:0002423,2.20e-07,25;UBERON:0006235,2.20e-07,25;UBERON:0004161,2.20e-07,25;UBERON:0009856,3.90e-07,26 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.2951363980343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,1.04602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,1.20041606606193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:166513830..166513834,+ | |||
}} |
Revision as of 03:51, 22 January 2014
Short description: | p@chr4:166513830..166513834, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:166513830..166513834, + |
Coexpression cluster: | C414_cholangiocellular_testis_gall_pagetoid_mesothelioma_thyroid_osteoclastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.75e-14 | 12 |
cardiac fibroblast | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 6.62e-41 | 1 |
acinus | 6.62e-41 | 1 |
intrahepatic bile duct | 6.62e-41 | 1 |
portal lobule | 6.62e-41 | 1 |
hepatic acinus | 6.62e-41 | 1 |
liver parenchyma | 1.22e-14 | 3 |
liver lobule | 1.22e-14 | 3 |
hepatic duct | 1.22e-14 | 3 |
liver | 2.08e-09 | 19 |
digestive gland | 2.08e-09 | 19 |
liver bud | 2.08e-09 | 19 |
hepatic diverticulum | 2.93e-08 | 22 |
liver primordium | 2.93e-08 | 22 |
bile duct | 5.54e-08 | 6 |
digestive system duct | 5.54e-08 | 6 |
digestive tract diverticulum | 6.08e-08 | 23 |
epithelial sac | 2.20e-07 | 25 |
epithelium of foregut-midgut junction | 2.20e-07 | 25 |
anatomical boundary | 2.20e-07 | 25 |
hepatobiliary system | 2.20e-07 | 25 |
foregut-midgut junction | 2.20e-07 | 25 |
septum transversum | 2.20e-07 | 25 |
sac | 3.90e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.48e-40 | 1 |
teratoma | 3.81e-21 | 2 |