FFCP PHASE1:Hg19::chr6:128239749..128239760,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387357 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21569 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_uc003qbi.2,uc010kfb.2_5end | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_6_at_THEMIS_5end | |||
|id=chr6:128239749..128239760,- | |||
|ontology_enrichment_celltype=CL:0000791!1.42e-31!18;CL:0000789!1.42e-31!18;CL:0002420!1.42e-31!18;CL:0002419!1.42e-31!18;CL:0000790!1.42e-31!18;CL:0000084!4.23e-29!25;CL:0000827!4.23e-29!25;CL:0000625!1.56e-23!11;CL:0000838!5.78e-15!52;CL:0000542!1.49e-14!53;CL:0000051!1.49e-14!53;CL:0000738!9.03e-10!140;CL:0002087!4.71e-09!119;CL:0000624!7.93e-09!6;CL:0000842!6.20e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;5.74e-53;11!CL:0000791;3.47e-51;18!CL:0000789;3.47e-51;18!CL:0002419;3.47e-51;18!CL:0000084;4.39e-41;25!CL:0000226;3.33e-14;3!CL:0000842;3.33e-14;3!CL:0000542;5.58e-12;53!CL:0000624;6.52e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.48e-53,11;CL:0000791,3.48e-51,18;CL:0000789,3.48e-51,18;CL:0002420,3.48e-51,18;CL:0002419,3.48e-51,18;CL:0000790,3.48e-51,18;CL:0000084,5.00e-41,25;CL:0000827,5.00e-41,25;CL:0000838,1.80e-20,52;CL:0000542,5.15e-20,53;CL:0000051,5.15e-20,53;CL:0000226,4.29e-14,3;CL:0000842,4.29e-14,3;CL:0002087,5.77e-12,115;CL:0000738,1.38e-10,136;CL:0000624,6.68e-08,6;CL:0002031,8.61e-08,120;CL:0000037,1.04e-07,168;CL:0000988,4.32e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;3.47e-51;18!CL:0000051;5.58e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.57e-23!115;UBERON:0000178!5.71e-15!15;UBERON:0000179!5.71e-15!15;UBERON:0000463!5.71e-15!15;UBERON:0004177!2.95e-09!7;UBERON:0002370!4.44e-08!4;UBERON:0005058!4.44e-08!4;UBERON:0009113!4.44e-08!4;UBERON:0003295!4.44e-08!4;UBERON:0005562!4.44e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.14e-29;15!UBERON:0000179;4.14e-29;15!UBERON:0000463;4.14e-29;15!UBERON:0002390;9.96e-15;32!UBERON:0002193;1.37e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.06e-29,15;UBERON:0000179,5.06e-29,15;UBERON:0000463,5.06e-29,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.53531759238885,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0.223915474239924,2.91504299417082,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31116379307349,0.786021525498329,5.34563897398724,0.167186495390678,0,0,0,0.668462741311041,0.883817722424512,1.32920336750173,0,0.25618263945135,0.260118695119756,1.15106533222573,1.38175008892924,2.02862160014537,3.41059095272739,2.67540828089713,3.1360657141493,5.09892042139048,7.66440987203842,5.84166657320471,13.4100436770337,9.875527844047,20.8346705234054,13.3063286222772,12.7988851216107,14.7184602827581,14.9916871862815,10.6549763419808,9.03240796613151,6.04820229674197,5.61624411145365,3.33096128930438,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,2.36436912242313,0.862510299438069,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,1.2942852049117,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,3.04468565539302,2.29391162142713,3.98753031021914,5.24109906007136,5.34770955012053,1.29694662238543,4.32025149790492,0.79312517629427,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,1.65770349318689,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,1.06787412567695,0.157204305099666,0.414239055347196,3.47316215268366,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.398594520940089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0.657887425858975,0.193373663920732,0,0,0,0,0,0.917458566809082,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0.23806443146374,0.645889098360061,1.1794195716213,0,0.0636471582781649,0,0.435433495793923,0,2.42467390852515,0.358611026963382,0,0,0,0,0,0,0.244482888365733,0,0,0.805095174364105,0 | |||
|short_description=p6@THEMIS | |||
}} |
Revision as of 13:48, 22 January 2014
Short description: | p6@THEMIS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_THEMIS_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -7bp_to_uc003qbi.2, uc010kfb.2_5end |
EntrezGene: | THEMIS |
HGNC: | 21569 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 5.48e-53 | 11 |
mature alpha-beta T cell | 3.48e-51 | 18 |
alpha-beta T cell | 3.48e-51 | 18 |
immature T cell | 3.48e-51 | 18 |
mature T cell | 3.48e-51 | 18 |
immature alpha-beta T cell | 3.48e-51 | 18 |
T cell | 5.00e-41 | 25 |
pro-T cell | 5.00e-41 | 25 |
lymphoid lineage restricted progenitor cell | 1.80e-20 | 52 |
lymphocyte | 5.15e-20 | 53 |
common lymphoid progenitor | 5.15e-20 | 53 |
single nucleate cell | 4.29e-14 | 3 |
mononuclear cell | 4.29e-14 | 3 |
nongranular leukocyte | 5.77e-12 | 115 |
leukocyte | 1.38e-10 | 136 |
CD4-positive, alpha-beta T cell | 6.68e-08 | 6 |
hematopoietic lineage restricted progenitor cell | 8.61e-08 | 120 |
hematopoietic stem cell | 1.04e-07 | 168 |
hematopoietic cell | 4.32e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 5.06e-29 | 15 |
haemolymphatic fluid | 5.06e-29 | 15 |
organism substance | 5.06e-29 | 15 |