FFCP PHASE1:Hg19::chr7:116312213..116312230,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7029 | |||
|TSSclassifier=strong | |||
|UniProt=C9JVH4 | |||
|association_with_transcript=-17bp_to_ENST00000437703_5end | |||
|coexpression_cluster_id=C1534 | |||
|description=CAGE_peak_3_at_MET_5end | |||
|id=chr7:116312213..116312230,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.31e-39!254;CL:0002076!3.18e-12!43;CL:0000223!1.37e-11!59;CL:0000076!2.19e-10!62;CL:0000220!7.19e-09!246;CL:0002321!1.02e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.07e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.37e-40,253;CL:0002076,2.47e-11,42;CL:0000223,3.26e-10,58;CL:0000076,2.60e-09,63 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.37e-09;29 | |||
|ontology_enrichment_disease=DOID:305!4.31e-18!106;DOID:0050687!9.70e-17!143;DOID:299!1.21e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.55e-08;25!DOID:1749;1.80e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.48e-20,106;DOID:0050687,1.98e-19,143;DOID:14566,2.50e-09,239;DOID:162,1.22e-08,235;DOID:299,1.28e-08,25;DOID:1749,2.12e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.53e-16!169;UBERON:0000925!3.53e-16!169;UBERON:0006595!3.53e-16!169;UBERON:0000077!1.87e-12!130;UBERON:0001007!8.78e-12!155;UBERON:0001555!8.78e-12!155;UBERON:0007026!8.78e-12!155;UBERON:0004921!2.10e-11!129;UBERON:0004185!2.10e-11!129;UBERON:0008947!4.42e-10!38;UBERON:0003258!4.42e-10!38;UBERON:0005911!1.30e-09!82;UBERON:0005177!1.32e-09!107;UBERON:0000065!1.66e-09!53;UBERON:0001041!3.13e-09!98;UBERON:0000467!4.59e-09!625;UBERON:0000480!5.05e-09!626;UBERON:0001004!2.05e-08!72;UBERON:0003104!2.18e-08!238;UBERON:0009142!2.18e-08!238;UBERON:0000468!4.70e-08!659;UBERON:0000062!1.27e-07!511;UBERON:0001008!3.79e-07!45;UBERON:0003975!4.35e-07!22;UBERON:0000064!5.07e-07!219;UBERON:0005157!5.17e-07!51;UBERON:0004923!6.06e-07!57;UBERON:0000072!6.41e-07!46;UBERON:0005795!7.35e-07!22;UBERON:0005153!8.04e-07!37;UBERON:0006554!9.48e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;6.89e-09;44!UBERON:0000072;2.28e-07;37!UBERON:0001737;6.09e-07;9!UBERON:0001557;6.09e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.22e-14,160;UBERON:0000925,2.22e-14,160;UBERON:0006595,2.22e-14,160;UBERON:0008947,2.48e-11,38;UBERON:0003258,2.48e-11,38;UBERON:0005911,4.59e-10,82;UBERON:0001007,5.75e-10,145;UBERON:0001555,5.75e-10,145;UBERON:0007026,5.75e-10,145;UBERON:0001008,9.98e-10,48;UBERON:0005177,1.87e-09,101;UBERON:0006554,3.27e-09,47;UBERON:0000065,3.70e-09,54;UBERON:0004921,8.67e-09,118;UBERON:0001004,4.90e-08,74;UBERON:0005631,8.53e-08,14;UBERON:0000158,8.53e-08,14;UBERON:0001041,2.71e-07,87;UBERON:0005157,4.54e-07,47;UBERON:0001737,7.62e-07,9;UBERON:0005153,8.89e-07,37 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,1.0007329835313,0,0,0,0,0,0.491467873003018,0,12.8880409556802,2.37390280405608,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0,0.61560529038394,1.63200552995402,0.313454721478088,0.572471974262113,1.77936752594749,1.38096903554283,0,0,0,0,0,1.08371286321253,3.67768489791571,3.31326510656075,2.9580320813343,0.0774672005803016,0.995184627411951,0,0,0.200544447470142,0,0,0,0,0,0,0,1.16214518452842,0.411167888021826,0,1.1507695692886,0,0,1.37898272294647,0.645484683583826,0,0.376484679085209,0.545812300115692,0.449446968890169,1.53041946185451,0.641858054152187,0,0,0,0,0,1.13477044938228,0,0,0,0,1.81619850790011,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,0.50133791063589,0.434539556882471,0,1.45990461090791,0.472674085820339,0,1.22968699970376,1.57174890597255,1.09288586487763,1.11235332835329,0,0,0,0,0,0,1.59009925893364,0.860234595106124,1.38856200643038,1.13061588384802,0.419499436209906,0.825354125820202,0.626984899610432,0,0.71153252537342,0,0.805658634218294,1.52054421143703,1.70843440283719,2.57364156242108,0,2.05389375053383,1.79623498100936,1.35133776579987,1.53316637465883,1.89853131913626,0.549605231791222,0,0,0.872188104285069,0.496971951695318,1.39293562831038,0.264818361626438,2.86836620748814,2.12801029319014,0,1.06748995729705,0.49333509683432,0,0.134710672069688,0.326923806226917,0,0,0,0.624320153660641,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0.336672227908132,0.375355559615893,0,0,0,0,0.226864366320042,3.7671823494661,0.85422955527427,1.05965950579781,7.50227740211006,1.44273540933814,0,0.37223371266318,14.5147645727489,2.53336213419116,1.26216887122057,0.276149695926898,0.80823028409406,1.77504796258307,2.11579406278045,2.37384829234683,3.28543450377605,3.81844568827169,5.16248271700207,0.243947412259191,0.132529768321485,0.232387885739037,0,0.252320850875628,0,0,0,1.38134921352481,0.464367928031979,0,6.38856720215157,7.92348043367078,5.3022426574366,4.96322877295773,5.22910665821775,4.03360052488864,4.1797705529651,7.2601942096378,2.30848294167834,0.738155454624648,0,0,0,0,0,2.36315962672562,0,2.33678033231916,1.3725424823882,1.86575485194663,7.86812272803337,7.23808601363742,2.68506490959736,0,0,0,0.463721619900307,3.05262605013136,1.44366447761074,0.462985512576611,1.14152491340759,0,0,0,0,0,0.93733833986777,2.01578553838631,1.70130116690864,7.6124744297421,3.19697332365358,2.68367875415648,0,0,0.207328115540772,0,0,6.1592957463404,2.67391897890794,1.17217447210047,1.71072446022705,1.33675740514321,14.1161237186641,3.71574362419752,0,0,0.7333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0.532844358032199,0,0.542621605391443,0,0,0,0,0.904318131178758,0,0.99972991182057,0,0,0,1.4377491329495,0,0,2.46128221334885,4.52047909610843,3.04403637507822,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0.36807447515742,0,0.271265023699736,0.831883446123229,1.96271887676878,1.89242898040722,3.63138386477411,0.902838299183157,0,1.03473071292505,3.32112799267718,0.921845842708516,0.781952530212746,0,0,0,0.215714200818617,0,7.57818928615649,16.6435439510497,10.2812699732091,0.496215615637554,1.07423381301644,0.841980283299221,0.256278298511402,0.511707249066704,0.160853921143607,0,1.07946785661859,0,2.21743321237285,0.519254429183621,0.813472649219715,3.14234568938218,2.40607764363942,7.91896504848708,0.229628896329213,2.1850940160806,0.393373244878272,4.51199612907412,3.23464415838542,3.13739907670742,2.92278449306521,7.07195913582267,0,0.510281115829547,3.45465465763423,0,1.89662506280697,1.00337954770971,4.07802036872061,1.66215201785745,2.46262230194396,0,0,1.79515087581472,2.62411716559765,3.25378394664303,3.50339439602256,0,0.082509499920588,2.87132768998086,2.60024098414608,0,0.96670718292122,0.308097234229289,0.15350367472613,0.275673144969061,0,0.290033387828457,0.681813019328807,0.356128142586949,4.79326254546837,3.65161127993702,7.14631189969671,4.95673126192195,0,1.25924938732256,0,1.54016790088044,0.532306030317022,0.869932992075073,0,0.858749320451947,0,0.316379424718726,0.571890581771475,0.255897791311334,0.42793898803392,0,0.78494864019923,0,0,0,0.606547444719948,0,0,0.48763373908959,1.21856744815642,0,0.818999468447914,0,1.13008116620243,1.65409603063837,0,0.438450885253763,0,1.31178950409327,0.202910376962704,0.30982349809975,0.563391205064483,0.430234056612155,0.687743287091848,0,2.48332744849418,1.89996871767898,0.329294892959902,0.379473173765715,0,4.90732774900111,2.01090682660736,4.3556393944529,3.76575203107117,3.01353760869861,5.05414427002877,1.7737206141467,5.05391480455311,0,0,0,0,0,0,0,0,0.106824071127473,6.73735898684351,5.14584453560167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30423242938906,3.22317994398167,0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| |||
|short_description=p3@MET | |||
}} |
Revision as of 18:57, 22 January 2014
Short description: | p3@MET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MET_5end |
Coexpression cluster: | C1534_gastric_signet_endometrial_pharyngeal_papillotubular_bile_squamous |
Association with transcript: | -17bp_to_ENST00000437703_5end |
EntrezGene: | MET |
HGNC: | 7029 |
UniProt: | C9JVH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.37e-40 | 253 |
endo-epithelial cell | 2.47e-11 | 42 |
endodermal cell | 3.26e-10 | 58 |
squamous epithelial cell | 2.60e-09 | 63 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.22e-14 | 160 |
endoderm | 2.22e-14 | 160 |
presumptive endoderm | 2.22e-14 | 160 |
respiratory primordium | 2.48e-11 | 38 |
endoderm of foregut | 2.48e-11 | 38 |
endo-epithelium | 4.59e-10 | 82 |
digestive system | 5.75e-10 | 145 |
digestive tract | 5.75e-10 | 145 |
primitive gut | 5.75e-10 | 145 |
renal system | 9.98e-10 | 48 |
trunk region element | 1.87e-09 | 101 |
urinary system structure | 3.27e-09 | 47 |
respiratory tract | 3.70e-09 | 54 |
subdivision of digestive tract | 8.67e-09 | 118 |
respiratory system | 4.90e-08 | 74 |
extraembryonic membrane | 8.53e-08 | 14 |
membranous layer | 8.53e-08 | 14 |
foregut | 2.71e-07 | 87 |
epithelial fold | 4.54e-07 | 47 |
larynx | 7.62e-07 | 9 |
epithelial bud | 8.89e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.48e-20 | 106 |
cell type cancer | 1.98e-19 | 143 |
disease of cellular proliferation | 2.50e-09 | 239 |
cancer | 1.22e-08 | 235 |
adenocarcinoma | 1.28e-08 | 25 |
squamous cell carcinoma | 2.12e-07 | 14 |