FFCP PHASE1:Hg19::chr8:96146053..96146079,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79666 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20757 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H8W4 | |||
|association_with_transcript=15bp_to_uc003yhn.1_5end | |||
|coexpression_cluster_id=C4783 | |||
|description=CAGE_peak_4_at_PLEKHF2_5end | |||
|id=chr8:96146053..96146079,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.66e-44!172;CL:0000566!8.66e-44!172;CL:0000738!1.07e-40!140;CL:0002032!2.40e-40!165;CL:0000837!2.40e-40!165;CL:0000988!1.25e-38!182;CL:0002031!1.28e-33!124;CL:0002087!4.16e-31!119;CL:0000763!1.58e-25!112;CL:0000049!1.58e-25!112;CL:0000766!8.48e-23!76;CL:0000557!5.74e-20!71;CL:0000839!9.49e-20!70;CL:0002009!4.89e-17!65;CL:0002057!1.70e-16!42;CL:0002194!2.40e-16!63;CL:0000576!2.40e-16!63;CL:0000040!2.40e-16!63;CL:0000559!2.40e-16!63;CL:0000860!3.42e-15!45;CL:0000542!2.99e-13!53;CL:0000051!2.99e-13!53;CL:0000838!8.58e-13!52;CL:0000945!5.01e-11!24;CL:0000826!5.01e-11!24;CL:0000236!4.54e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.26e-14;33!CL:0002057;1.26e-14;33!CL:0000576;1.02e-13;48!CL:0000473;1.30e-13;39!CL:0000234;1.30e-13;39!CL:0000945;1.39e-12;24!CL:0000766;1.75e-12;69!CL:0000763;1.00e-10;100!CL:0000236;1.81e-10;13!CL:0002087;3.97e-10;104!CL:0000738;5.54e-10;136!CL:0000988;8.49e-08;177!CL:0000542;2.60e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.28e-50,168;CL:0000738,5.61e-46,136;CL:0002032,1.06e-45,161;CL:0000837,1.06e-45,161;CL:0000988,5.29e-45,177;CL:0002031,5.90e-38,120;CL:0002087,5.92e-35,115;CL:0000763,6.36e-32,108;CL:0000049,6.36e-32,108;CL:0000766,2.16e-29,72;CL:0000557,7.64e-26,67;CL:0000839,1.39e-25,66;CL:0002009,3.61e-22,61;CL:0002194,2.58e-21,59;CL:0000576,2.58e-21,59;CL:0000040,2.58e-21,59;CL:0000559,2.58e-21,59;CL:0000473,4.23e-21,48;CL:0000234,4.23e-21,48;CL:0000860,1.10e-19,42;CL:0002057,1.10e-19,42;CL:0000945,2.80e-12,24;CL:0000826,2.80e-12,24;CL:0000542,3.75e-12,53;CL:0000051,3.75e-12,53;CL:0000838,1.21e-11,52;CL:0000236,1.13e-10,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-14;42!CL:0000049;4.93e-09;108!CL:0000051;2.60e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.65e-20!102;UBERON:0003061!1.65e-20!102;UBERON:0002193!2.65e-18!112;UBERON:0002371!1.60e-15!80;UBERON:0001474!2.65e-14!86;UBERON:0002405!5.12e-10!115;UBERON:0004765!1.59e-09!101;UBERON:0001434!1.59e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.37e-26,98;UBERON:0003061,5.37e-26,98;UBERON:0002193,3.03e-23,108;UBERON:0002371,1.51e-21,76;UBERON:0002405,1.97e-19,93;UBERON:0001474,2.97e-19,82;UBERON:0004765,2.08e-16,90;UBERON:0001434,9.69e-13,100 | |||
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| |||
|short_description=p4@PLEKHF2 | |||
}} |
Revision as of 22:57, 22 January 2014
Short description: | p4@PLEKHF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLEKHF2_5end |
Coexpression cluster: | C4783_CD14_CD19_breast_Burkitt_chronic_Mast_gall |
Association with transcript: | 15bp_to_uc003yhn.1_5end |
EntrezGene: | PLEKHF2 |
HGNC: | 20757 |
UniProt: | Q9H8W4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.28e-50 | 168 |
leukocyte | 5.61e-46 | 136 |
hematopoietic oligopotent progenitor cell | 1.06e-45 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-45 | 161 |
hematopoietic cell | 5.29e-45 | 177 |
hematopoietic lineage restricted progenitor cell | 5.90e-38 | 120 |
nongranular leukocyte | 5.92e-35 | 115 |
myeloid cell | 6.36e-32 | 108 |
common myeloid progenitor | 6.36e-32 | 108 |
myeloid leukocyte | 2.16e-29 | 72 |
granulocyte monocyte progenitor cell | 7.64e-26 | 67 |
myeloid lineage restricted progenitor cell | 1.39e-25 | 66 |
macrophage dendritic cell progenitor | 3.61e-22 | 61 |
monopoietic cell | 2.58e-21 | 59 |
monocyte | 2.58e-21 | 59 |
monoblast | 2.58e-21 | 59 |
promonocyte | 2.58e-21 | 59 |
defensive cell | 4.23e-21 | 48 |
phagocyte | 4.23e-21 | 48 |
classical monocyte | 1.10e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.10e-19 | 42 |
lymphocyte of B lineage | 2.80e-12 | 24 |
pro-B cell | 2.80e-12 | 24 |
lymphocyte | 3.75e-12 | 53 |
common lymphoid progenitor | 3.75e-12 | 53 |
lymphoid lineage restricted progenitor cell | 1.21e-11 | 52 |
B cell | 1.13e-10 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.37e-26 | 98 |
blood island | 5.37e-26 | 98 |
hemolymphoid system | 3.03e-23 | 108 |
bone marrow | 1.51e-21 | 76 |
immune system | 1.97e-19 | 93 |
bone element | 2.97e-19 | 82 |
skeletal element | 2.08e-16 | 90 |
skeletal system | 9.69e-13 | 100 |