FFCP PHASE1:Hg19::chr9:135854168..135854179,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8328 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4238 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VTD9 | |||
|association_with_transcript=70bp_to_ENST00000450530,ENST00000534944,NM_001135031,NM_004188_5end | |||
|description=CAGE_peak_5_at_GFI1B_5end | |||
|id=chr9:135854168..135854179,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.15e-30!112;CL:0000049!1.15e-30!112;CL:0000037!1.14e-21!172;CL:0000566!1.14e-21!172;CL:0000988!4.80e-20!182;CL:0002032!7.40e-20!165;CL:0000837!7.40e-20!165;CL:0002393!1.34e-15!9;CL:0002397!1.34e-15!9;CL:0002274!3.46e-13!5;CL:0000457!3.46e-13!5;CL:0002191!3.46e-13!5;CL:0000097!3.46e-13!5;CL:0000831!3.46e-13!5;CL:0002028!3.46e-13!5;CL:0000875!4.91e-13!3;CL:0002396!4.91e-13!3;CL:0000764!1.18e-09!2;CL:0000765!1.18e-09!2;CL:0000050!1.18e-09!2;CL:0000038!1.18e-09!2;CL:0000558!1.18e-09!2;CL:0000547!1.18e-09!2;CL:0000549!1.18e-09!2;CL:0000550!1.18e-09!2;CL:0000552!1.18e-09!2;CL:0000839!4.32e-08!70;CL:0000163!2.31e-07!9;CL:0000766!3.14e-07!76;CL:0000134!5.40e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.05e-19;2!CL:0000558;1.05e-19;2!CL:0000763;4.45e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.60e-20,108;CL:0000049,7.60e-20,108;CL:0000764,1.41e-19,2;CL:0000765,1.41e-19,2;CL:0000050,1.41e-19,2;CL:0000038,1.41e-19,2;CL:0000558,1.41e-19,2;CL:0000547,1.41e-19,2;CL:0000549,1.41e-19,2;CL:0000550,1.41e-19,2;CL:0000552,1.41e-19,2;CL:0002032,1.61e-12,161;CL:0000837,1.61e-12,161;CL:0000037,6.80e-12,168;CL:0000988,3.68e-11,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.82e-32!31;DOID:1036!3.17e-25!8;DOID:1240!9.62e-25!39;DOID:2531!5.25e-18!51;DOID:0060083!5.25e-18!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.47e-41;31!DOID:1240;4.08e-25;39!DOID:1036;3.03e-19;8!DOID:2531;2.74e-16;51!DOID:0060083;2.74e-16;51!DOID:8552;3.94e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.86e-42,31;DOID:1240,2.17e-33,39;DOID:2531,4.13e-25,51;DOID:0060083,4.13e-25,51;DOID:1036,4.53e-19,8;DOID:8552,5.05e-11,1;DOID:0050686,4.35e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.76e-13!15;UBERON:0000179!6.76e-13!15;UBERON:0000463!6.76e-13!15;UBERON:0002390!4.48e-11!102;UBERON:0003061!4.48e-11!102;UBERON:0002193!1.07e-09!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.619264493264304,0,0,0,0,0,0.880801318004542,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0,0,0,0,1.14005097496499,0.99458338599545,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.792435906119034,0.414656231081544,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24702107184155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,0.714695326373367,0,0,1.62009431171434,2.37937552888281,0,0,0,0,0,0,0,2.99369057149225,1.53204296105893,2.96343015813436,0,0,0,0,0,2.53937666702405,0,0,0,0,0,0,0,0,1.11362469558097,3.69262196843137,1.89318974933188,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1396051279005,2.16075186470203,0.676786981851542,1.37243774022418,1.00692952185506,0.37950746544837,0.794682894901893,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06720276974141,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@GFI1B | |||
}} |
Revision as of 03:52, 23 January 2014
Short description: | p5@GFI1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GFI1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_ENST00000450530, ENST00000534944, NM_001135031, NM_004188_5end |
EntrezGene: | GFI1B |
HGNC: | 4238 |
UniProt: | Q5VTD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.60e-20 | 108 |
common myeloid progenitor | 7.60e-20 | 108 |
erythroid lineage cell | 1.41e-19 | 2 |
erythroblast | 1.41e-19 | 2 |
megakaryocyte-erythroid progenitor cell | 1.41e-19 | 2 |
erythroid progenitor cell | 1.41e-19 | 2 |
reticulocyte | 1.41e-19 | 2 |
proerythroblast | 1.41e-19 | 2 |
basophilic erythroblast | 1.41e-19 | 2 |
polychromatophilic erythroblast | 1.41e-19 | 2 |
orthochromatic erythroblast | 1.41e-19 | 2 |
hematopoietic oligopotent progenitor cell | 1.61e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-12 | 161 |
hematopoietic stem cell | 6.80e-12 | 168 |
hematopoietic cell | 3.68e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.86e-42 | 31 |
leukemia | 2.17e-33 | 39 |
hematologic cancer | 4.13e-25 | 51 |
immune system cancer | 4.13e-25 | 51 |
chronic leukemia | 4.53e-19 | 8 |
chronic myeloid leukemia | 5.05e-11 | 1 |
organ system cancer | 4.35e-08 | 137 |