FFCP PHASE1:Hg19::chrX:54501038..54501075,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_at_chrX:54501038..54501075,- | |||
|id=chrX:54501038..54501075,- | |||
|ontology_enrichment_celltype=CL:0000066!8.51e-38!254;CL:0002076!3.94e-21!43;CL:0000076!2.18e-15!62;CL:0000223!2.08e-14!59;CL:0002368!1.30e-13!13;CL:0002159!8.64e-13!13;CL:0000622!7.70e-09!5;CL:0000244!4.11e-08!4;CL:0000731!4.11e-08!4;CL:0000063!4.55e-08!578;CL:0000077!6.85e-08!19;CL:1000507!8.65e-08!12;CL:1000494!8.65e-08!12;CL:0000220!8.94e-08!246;CL:0002251!1.22e-07!21;CL:0002321!1.33e-07!248;CL:0002202!1.33e-07!9;CL:0002632!1.33e-07!9;CL:1000497!2.19e-07!18;CL:0002518!2.19e-07!18;CL:0000154!2.89e-07!6;CL:0002328!7.82e-07!3;CL:0000068!8.26e-07!3;CL:0000069!8.26e-07!3;CL:0000307!8.26e-07!3;CL:0000377!8.26e-07!3;CL:1000449!8.38e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.21e-25;13!CL:0002076;1.78e-21;42!CL:0002159;9.56e-18;14!CL:0002202;1.02e-13;9!CL:0002632;1.02e-13;9!CL:0000244;1.23e-13;4!CL:0000731;1.23e-13;4!CL:0002328;2.13e-11;3!CL:0000307;2.57e-11;3!CL:0002621;4.47e-11;3!CL:0000622;2.57e-10;5!CL:0000239;3.53e-10;3!CL:1000615;3.53e-10;3!CL:0002306;3.53e-10;3!CL:0000362;4.00e-09;9!CL:0002251;7.35e-09;20!CL:0000240;7.61e-09;6!CL:0000311;7.61e-09;6!CL:0000079;7.61e-09;6!CL:0000237;7.61e-09;6!CL:0000154;1.33e-08;6!CL:0002327;2.60e-08;4!CL:0000317;9.86e-08;2!CL:1000448;9.86e-08;2!CL:0002308;9.86e-08;2!CL:0002140;9.86e-08;2!CL:1000507;1.16e-07;10!CL:1000494;1.16e-07;10!CL:0000575;2.46e-07;2!CL:0002077;5.02e-07;34!CL:0002536;5.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.16e-32,253;CL:0002076,2.11e-26,42;CL:0002368,4.80e-25,13;CL:0002159,7.60e-18,14;CL:0000223,1.18e-17,58;CL:0000244,9.63e-14,4;CL:0000731,9.63e-14,4;CL:0002202,1.03e-13,9;CL:0002632,1.03e-13,9;CL:0002328,2.25e-11,3;CL:0000068,2.49e-11,3;CL:0000069,2.49e-11,3;CL:0000307,2.49e-11,3;CL:0000377,2.49e-11,3;CL:0002621,3.72e-11,3;CL:0000622,2.77e-10,5;CL:0000239,3.01e-10,3;CL:1000615,3.01e-10,3;CL:0002306,3.01e-10,3;CL:0000362,3.97e-09,9;CL:0000076,4.13e-09,63;CL:0000240,6.46e-09,6;CL:0000311,6.46e-09,6;CL:0000079,6.46e-09,6;CL:0000237,6.46e-09,6;CL:0000036,6.46e-09,6;CL:0000357,6.46e-09,6;CL:0000114,6.46e-09,6;CL:0002251,6.68e-09,20;CL:0000154,1.41e-08,6;CL:0002321,1.59e-08,250;CL:0002327,2.64e-08,4;CL:0002077,8.45e-08,34;CL:0000317,9.87e-08,2;CL:1000448,9.87e-08,2;CL:0002308,9.87e-08,2;CL:0002140,9.87e-08,2;CL:1000507,1.14e-07,10;CL:1000494,1.14e-07,10;CL:0000575,1.72e-07,2;CL:0002536,4.49e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;2.57e-11;3!CL:0000223;7.50e-10;58!CL:0000357;7.61e-09;6!CL:0000114;7.61e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!2.44e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!9.10e-11!44;UBERON:0001008!2.12e-10!45;UBERON:0001004!6.68e-10!72;UBERON:0004119!4.96e-09!169;UBERON:0000925!4.96e-09!169;UBERON:0006595!4.96e-09!169;UBERON:0000365!5.90e-09!5;UBERON:0000464!1.91e-08!104;UBERON:0000161!7.80e-08!35;UBERON:0009773!8.65e-08!12;UBERON:0001231!8.65e-08!12;UBERON:0004810!8.65e-08!12;UBERON:0006555!1.26e-07!17;UBERON:0005103!1.26e-07!17;UBERON:0000083!1.26e-07!17;UBERON:0009201!1.26e-07!17;UBERON:0004819!1.26e-07!17;UBERON:0006553!1.26e-07!17;UBERON:0003074!1.26e-07!17;UBERON:0003060!1.26e-07!17;UBERON:0005910!2.33e-07!6;UBERON:0000166!2.59e-07!21;UBERON:0007196!2.70e-07!14;UBERON:0001558!2.70e-07!14;UBERON:0000080!4.43e-07!18;UBERON:0002120!4.43e-07!18;UBERON:0004875!4.43e-07!18;UBERON:0005721!4.43e-07!18;UBERON:0005754!4.43e-07!18;UBERON:0007297!4.43e-07!18;UBERON:0003064!6.65e-07!37;UBERON:0003887!7.21e-07!21;UBERON:0004815!7.82e-07!3;UBERON:0002031!7.82e-07!3;UBERON:0004211!8.38e-07!16;UBERON:0001285!8.38e-07!16;UBERON:0007684!8.38e-07!16;UBERON:0003220!8.38e-07!16;UBERON:0004208!8.38e-07!16;UBERON:0000065!9.19e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;6.15e-13;12!UBERON:0004815;2.13e-11;3!UBERON:0002031;2.13e-11;3!UBERON:0001949;4.47e-11;3!UBERON:0000365;6.49e-11;5!UBERON:0006853;3.53e-10;3!UBERON:0007685;3.53e-10;3!UBERON:0004134;3.53e-10;3!UBERON:0005910;4.28e-09;6!UBERON:0006554;9.11e-09;30!UBERON:0001008;9.11e-09;30!UBERON:0001911;2.60e-08;4!UBERON:0007196;6.62e-08;15!UBERON:0001558;6.62e-08;15!UBERON:0002419;9.86e-08;2!UBERON:0007771;9.86e-08;2!UBERON:0003297;9.86e-08;2!UBERON:0001821;9.86e-08;2!UBERON:0003487;9.86e-08;2!UBERON:0001820;9.86e-08;2!UBERON:0004211;1.16e-07;10!UBERON:0009773;1.16e-07;10!UBERON:0001231;1.16e-07;10!UBERON:0004810;1.16e-07;10!UBERON:0005911;1.79e-07;36!UBERON:0010371;4.83e-07;31!UBERON:0002185;5.74e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.25e-11,3;UBERON:0002031,2.25e-11,3;UBERON:0001949,3.72e-11,3;UBERON:0000365,5.36e-11,5;UBERON:0006853,3.01e-10,3;UBERON:0007685,3.01e-10,3;UBERON:0004134,3.01e-10,3;UBERON:0005910,3.66e-09,6;UBERON:0001004,6.72e-09,74;UBERON:0001911,2.64e-08,4;UBERON:0005333,2.64e-08,4;UBERON:0008425,2.64e-08,4;UBERON:0005311,2.64e-08,4;UBERON:0007196,6.66e-08,15;UBERON:0001558,6.66e-08,15;UBERON:0002419,9.87e-08,2;UBERON:0007771,9.87e-08,2;UBERON:0003297,9.87e-08,2;UBERON:0001821,9.87e-08,2;UBERON:0003487,9.87e-08,2;UBERON:0001820,9.87e-08,2;UBERON:0005089,9.87e-08,2;UBERON:0005088,9.87e-08,2;UBERON:0004810,1.14e-07,10;UBERON:0006554,3.15e-07,47;UBERON:0004119,3.45e-07,160;UBERON:0000925,3.45e-07,160;UBERON:0006595,3.45e-07,160;UBERON:0001008,5.01e-07,48;UBERON:0002185,5.92e-07,5 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,1.74753097704138,2.11013582582763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.35536979583142,8.433765725791,7.39508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,3.1811437882044,0.486634870302636,0,0,0,0,5.82872461268068,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47869535693934,7.9096374971342,8.89094245705912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03626569747441,5.62008766288098,2.6137532827024,1.85176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,8.06314215354526,4.82035330624114,5.82130397568514,5.52204483176528,5.36735750831296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80863626235752,0.871533458600294,2.0994328148232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20810352485256,0.736647911487171,0,0,0,0,0.462092022626489,3.92174884588428,0,0.422206515571503,0,0,0.431831832204279,0,1.08378575017541,0.501689773854853,1.52925763827023,4.15538004464362,3.80587083027703,0,0,0,0,0,0,0,0,6.3169209179579,3.25030123018261,0,0,0,0,0,0,0,0,0,3.14041339185858,6.3422722230485,9.44334072459923,4.2486267959331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32999507264804,10.0545341330368,8.71127878890581,0,7.74909670808214,5.05414427002877,3.99087138183008,2.98640420269047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0.23874448473769,0,1.22864280839693,0,0,0.222617410045812,0,0,0,0,0,0,0,0,1.25815691606258,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,2.64905114129346,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89898258075224,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,0.261177619741208,0.17472666824203,0,0,0,0,0,0,0,2.19267079434801,0.19871461170299,0,0,0.64127056201227,0,0,0,0,0,0,1.49103042678519,1.17847017308398,0.543616824294456,0.627617077873999,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,7.021753835472,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0.97894681802587,0.358177682162975,0,0.657852148736121,0,1.73622634443823,2.02730928783687,0.76872455576384,0,0,0,0,0,0,0,0,3.38099397373803,0,0,0,0,0,0.279759015438889,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23887471053385,0,0.183428598521679,0.693153996902029,0.381382095467167,0,0,0,0.60511520611056,0,0,0.163771917510097,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.778619813244484,0,0,0,0,3.67076905071656,0,0,0,0,0,0,1.24329698497822,1.3657478167516,0.691259661814092,0,0,0,0,1.14553434272025,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,3.17605384544123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0.435433495793923,0,0.202056159043763,0.573777643141411,0.332660356546013,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chrX:54501038..54501075,- | |||
}} |
Revision as of 05:48, 23 January 2014
Short description: | p@chrX:54501038..54501075, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:54501038..54501075, - |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.25e-11 | 3 |
epithelium of bronchus | 2.25e-11 | 3 |
gingival epithelium | 3.72e-11 | 3 |
urothelium | 5.36e-11 | 5 |
renal cortex tubule | 3.01e-10 | 3 |
region of nephron tubule | 3.01e-10 | 3 |
proximal tubule | 3.01e-10 | 3 |
transitional epithelium | 3.66e-09 | 6 |
respiratory system | 6.72e-09 | 74 |
mammary gland | 2.64e-08 | 4 |
mammary bud | 2.64e-08 | 4 |
mammary ridge | 2.64e-08 | 4 |
mammary placode | 2.64e-08 | 4 |
tracheobronchial tree | 6.66e-08 | 15 |
lower respiratory tract | 6.66e-08 | 15 |
skin gland | 9.87e-08 | 2 |
epidermis gland | 9.87e-08 | 2 |
gland of integumental system | 9.87e-08 | 2 |
sebaceous gland | 9.87e-08 | 2 |
skin sebaceous gland | 9.87e-08 | 2 |
sweat gland | 9.87e-08 | 2 |
sweat gland placode | 9.87e-08 | 2 |
sebaceous gland placode | 9.87e-08 | 2 |
nephron tubule epithelium | 1.14e-07 | 10 |
urinary system structure | 3.15e-07 | 47 |
endoderm-derived structure | 3.45e-07 | 160 |
endoderm | 3.45e-07 | 160 |
presumptive endoderm | 3.45e-07 | 160 |
renal system | 5.01e-07 | 48 |
bronchus | 5.92e-07 | 5 |