FFCP PHASE1:Hg19::chr10:105849718..105849729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:105849718..105849729,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:105849718..105849729,+ | |||
|id=chr10:105849718..105849729,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.35e-71!42;CL:0000860!3.56e-66!45;CL:0002009!4.55e-48!65;CL:0002194!2.87e-45!63;CL:0000576!2.87e-45!63;CL:0000040!2.87e-45!63;CL:0000559!2.87e-45!63;CL:0000557!1.07e-43!71;CL:0000839!2.20e-40!70;CL:0000766!6.68e-37!76;CL:0000763!3.18e-26!112;CL:0000049!3.18e-26!112;CL:0002031!2.83e-23!124;CL:0002087!4.01e-22!119;CL:0000738!4.04e-20!140;CL:0002032!2.09e-16!165;CL:0000837!2.09e-16!165;CL:0000037!1.47e-15!172;CL:0000566!1.47e-15!172;CL:0000988!1.85e-14!182;CL:0002393!7.11e-07!9;CL:0002397!7.11e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-63;33!CL:0002057;1.46e-63;33!CL:0000473;1.85e-46;39!CL:0000234;1.85e-46;39!CL:0000576;6.76e-27;48!CL:0000766;9.90e-23;69!CL:0002087;8.08e-12;104!CL:0000763;7.30e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-55,42;CL:0002057,1.62e-55,42;CL:0000473,1.66e-48,48;CL:0000234,1.66e-48,48;CL:0002194,1.10e-38,59;CL:0000576,1.10e-38,59;CL:0000040,1.10e-38,59;CL:0000559,1.10e-38,59;CL:0002009,2.04e-37,61;CL:0000839,1.41e-34,66;CL:0000557,4.65e-34,67;CL:0000766,1.11e-31,72;CL:0000763,5.64e-21,108;CL:0000049,5.64e-21,108;CL:0002087,1.16e-19,115;CL:0002031,8.13e-19,120;CL:0000738,1.60e-16,136;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-41;42!CL:0000049;5.40e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.39e-38!80;UBERON:0001474!2.13e-35!86;UBERON:0004765!2.42e-32!101;UBERON:0001434!2.42e-32!101;UBERON:0002390!3.32e-29!102;UBERON:0003061!3.32e-29!102;UBERON:0002193!3.18e-26!112;UBERON:0002405!1.98e-25!115;UBERON:0002204!8.16e-18!167;UBERON:0003081!9.23e-13!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.34e-30,76;UBERON:0001474,8.85e-28,82;UBERON:0004765,2.83e-25,90;UBERON:0002405,1.92e-24,93;UBERON:0002390,3.59e-23,98;UBERON:0003061,3.59e-23,98;UBERON:0001434,1.07e-22,100;UBERON:0002193,5.64e-21,108;UBERON:0002204,2.60e-13,167;UBERON:0003081,8.49e-11,203 | |||
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|short_description=p@chr10:105849718..105849729,+ | |||
}} | }} |
Latest revision as of 10:05, 23 July 2015
Short description: | p@chr10:105849718..105849729, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105849718..105849729, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.62e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-55 | 42 |
defensive cell | 1.66e-48 | 48 |
phagocyte | 1.66e-48 | 48 |
monopoietic cell | 1.10e-38 | 59 |
monocyte | 1.10e-38 | 59 |
monoblast | 1.10e-38 | 59 |
promonocyte | 1.10e-38 | 59 |
macrophage dendritic cell progenitor | 2.04e-37 | 61 |
myeloid lineage restricted progenitor cell | 1.41e-34 | 66 |
granulocyte monocyte progenitor cell | 4.65e-34 | 67 |
myeloid leukocyte | 1.11e-31 | 72 |
myeloid cell | 5.64e-21 | 108 |
common myeloid progenitor | 5.64e-21 | 108 |
nongranular leukocyte | 1.16e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 8.13e-19 | 120 |
leukocyte | 1.60e-16 | 136 |
hematopoietic oligopotent progenitor cell | 7.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-14 | 161 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.34e-30 | 76 |
bone element | 8.85e-28 | 82 |
skeletal element | 2.83e-25 | 90 |
immune system | 1.92e-24 | 93 |
hematopoietic system | 3.59e-23 | 98 |
blood island | 3.59e-23 | 98 |
skeletal system | 1.07e-22 | 100 |
hemolymphoid system | 5.64e-21 | 108 |
musculoskeletal system | 2.60e-13 | 167 |
lateral plate mesoderm | 8.49e-11 | 203 |