FFCP PHASE1:Hg19::chr10:121028755..121028771,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:121028755..121028771,+ | |||
|coexpression_cluster_id=C8 | |coexpression_cluster_id=C8 | ||
|description=CAGE_peak_at_chr10:121028755..121028771,+ | |description=CAGE_peak_at_chr10:121028755..121028771,+ | ||
|id=chr10:121028755..121028771,+ | |id=chr10:121028755..121028771,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.57e-37!140;CL:0000037!6.85e-31!172;CL:0000566!6.85e-31!172;CL:0000988!1.90e-28!182;CL:0002032!6.29e-27!165;CL:0000837!6.29e-27!165;CL:0002087!8.62e-27!119;CL:0000838!1.64e-26!52;CL:0000542!7.10e-26!53;CL:0000051!7.10e-26!53;CL:0002031!1.22e-25!124;CL:0000791!7.70e-20!18;CL:0000789!7.70e-20!18;CL:0002420!7.70e-20!18;CL:0002419!7.70e-20!18;CL:0000790!7.70e-20!18;CL:0000094!9.90e-17!8;CL:0000084!1.12e-15!25;CL:0000827!1.12e-15!25;CL:0002393!6.89e-14!9;CL:0002397!6.89e-14!9;CL:0000766!2.14e-12!76;CL:0000624!7.53e-12!6;CL:0000081!7.75e-12!11;CL:0000625!1.85e-11!11;CL:0000236!3.01e-11!14;CL:0000623!5.39e-10!3;CL:0000825!5.39e-10!3;CL:0000767!2.33e-09!3;CL:0000134!1.23e-08!358;CL:0000842!2.39e-08!3;CL:0002320!3.12e-08!365;CL:0000034!1.77e-07!444;CL:0002057!1.97e-07!42;CL:0000945!2.03e-07!24;CL:0000826!2.03e-07!24;CL:0000763!2.05e-07!112;CL:0000049!2.05e-07!112;CL:0000219!7.98e-07!390;CL:0000771!8.13e-07!2;CL:0000860!9.38e-07!45 | |ontology_enrichment_celltype=CL:0000738!1.57e-37!140;CL:0000037!6.85e-31!172;CL:0000566!6.85e-31!172;CL:0000988!1.90e-28!182;CL:0002032!6.29e-27!165;CL:0000837!6.29e-27!165;CL:0002087!8.62e-27!119;CL:0000838!1.64e-26!52;CL:0000542!7.10e-26!53;CL:0000051!7.10e-26!53;CL:0002031!1.22e-25!124;CL:0000791!7.70e-20!18;CL:0000789!7.70e-20!18;CL:0002420!7.70e-20!18;CL:0002419!7.70e-20!18;CL:0000790!7.70e-20!18;CL:0000094!9.90e-17!8;CL:0000084!1.12e-15!25;CL:0000827!1.12e-15!25;CL:0002393!6.89e-14!9;CL:0002397!6.89e-14!9;CL:0000766!2.14e-12!76;CL:0000624!7.53e-12!6;CL:0000081!7.75e-12!11;CL:0000625!1.85e-11!11;CL:0000236!3.01e-11!14;CL:0000623!5.39e-10!3;CL:0000825!5.39e-10!3;CL:0000767!2.33e-09!3;CL:0000134!1.23e-08!358;CL:0000842!2.39e-08!3;CL:0002320!3.12e-08!365;CL:0000034!1.77e-07!444;CL:0002057!1.97e-07!42;CL:0000945!2.03e-07!24;CL:0000826!2.03e-07!24;CL:0000763!2.05e-07!112;CL:0000049!2.05e-07!112;CL:0000219!7.98e-07!390;CL:0000771!8.13e-07!2;CL:0000860!9.38e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.62e-25;8!CL:0000624;1.80e-23;6!CL:0000791;1.68e-19;18!CL:0000789;1.68e-19;18!CL:0002419;1.68e-19;18!CL:0000623;3.43e-19;3!CL:0000081;2.83e-18;11!CL:0000767;6.17e-18;3!CL:0000542;1.68e-14;53!CL:0000084;1.04e-13;25!CL:0000771;1.52e-12;2!CL:0000097;3.49e-11;5!CL:0000236;1.86e-10;13!CL:0002393;2.01e-09;6!CL:0002397;2.01e-09;6!CL:0000898;2.59e-08;3!CL:0000895;6.49e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.04e-30,136;CL:0000094,2.68e-25,8;CL:0000838,5.02e-25,52;CL:0000542,1.73e-24,53;CL:0000051,1.73e-24,53;CL:0000624,1.56e-23,6;CL:0000037,3.83e-23,168;CL:0002032,1.79e-22,161;CL:0000837,1.79e-22,161;CL:0000988,1.10e-21,177;CL:0000791,1.58e-19,18;CL:0000789,1.58e-19,18;CL:0002420,1.58e-19,18;CL:0002419,1.58e-19,18;CL:0000790,1.58e-19,18;CL:0000623,3.33e-19,3;CL:0000825,3.33e-19,3;CL:0002031,1.54e-18,120;CL:0000081,2.88e-18,11;CL:0000767,7.13e-18,3;CL:0002087,1.19e-15,115;CL:0000084,9.98e-14,25;CL:0000827,9.98e-14,25;CL:0000771,1.44e-12,2;CL:0000097,3.20e-11,5;CL:0002028,3.20e-11,5;CL:0000236,1.00e-09,14;CL:0000766,4.39e-09,72;CL:0000898,2.45e-08,3;CL:0000134,5.60e-08,354;CL:0002320,1.04e-07,361;CL:0000810,6.49e-07,1;CL:0000895,6.49e-07,1;CL:0002436,6.49e-07,1;CL:0002427,6.49e-07,1;CL:0002428,6.49e-07,1;CL:0002429,6.49e-07,1;CL:0002433,6.49e-07,1;CL:0002431,6.49e-07,1;CL:0002432,6.49e-07,1;CL:0000219,9.06e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;1.68e-19;18!CL:0000051;1.68e-14;53!CL:0002427;6.49e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.10e-07!375;UBERON:0002390!2.03e-07!102;UBERON:0003061!2.03e-07!102;UBERON:0002193!5.25e-07!112 | |ontology_enrichment_uberon=UBERON:0002384!1.10e-07!375;UBERON:0002390!2.03e-07!102;UBERON:0003061!2.03e-07!102;UBERON:0002193!5.25e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.40e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6208354749204,3.0706351847777,2.63187409637329,0,0,0,0,0,0.293600439334847,6.09394949385065,4.61252229181326,8.02940221648652,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0,0.628975936525128,0.112328631146495,0.450530678524519,0,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,1.28019066769952,0.800791974072025,0.574752439954483,0,1.90810750907073,4.55370375287559,1.17447437874188,1.52909291250092,5.28685314316103,5.04457706683382,0.263384084775077,7.08155172409799,3.93010762749165,3.28962398399215,0,0,0,0,0.891283655081389,1.47302953737419,0.443067789167242,0.812411591295047,0,0.130059347559878,0,0,0.289803085735052,1.03800594213442,1.07016331235885,0,0,2.68254345521345,5.15441168223945,4.30133476433155,0,0.651083453856419,0.950452044448374,0.301150238155546,0,0,0.236777252044017,0,15.1205057418549,11.2324882229073,8.11016661743674,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,11.6334079244498,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87846839054934,4.90007841617669,6.9433338384509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3683992957503,18.5439714379185,22.8450604577952,0.254094624222463,0,0,0,0,0,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,3.23571301227925,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6208354749204,3.0706351847777,2.63187409637329,0,0,0,0,0,0.293600439334847,6.09394949385065,4.61252229181326,8.02940221648652,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0,0.628975936525128,0.112328631146495,0.450530678524519,0,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,1.28019066769952,0.800791974072025,0.574752439954483,0,1.90810750907073,4.55370375287559,1.17447437874188,1.52909291250092,5.28685314316103,5.04457706683382,0.263384084775077,7.08155172409799,3.93010762749165,3.28962398399215,0,0,0,0,0.891283655081389,1.47302953737419,0.443067789167242,0.812411591295047,0,0.130059347559878,0,0,0.289803085735052,1.03800594213442,1.07016331235885,0,0,2.68254345521345,5.15441168223945,4.30133476433155,0,0.651083453856419,0.950452044448374,0.301150238155546,0,0,0.236777252044017,0,15.1205057418549,11.2324882229073,8.11016661743674,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,11.6334079244498,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87846839054934,4.90007841617669,6.9433338384509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3683992957503,18.5439714379185,22.8450604577952,0.254094624222463,0,0,0,0,0,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,3.23571301227925,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:121028755..121028771,+ | |short_description=p@chr10:121028755..121028771,+ | ||
}} | }} |
Latest revision as of 10:58, 23 July 2015
Short description: | p@chr10:121028755..121028771, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:121028755..121028771, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.40e-07 | 371 |