FFCP PHASE1:Hg19::chr10:121464235..121464249,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:121464235..121464249,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:121464235..121464249,+ | |description=CAGE_peak_at_chr10:121464235..121464249,+ | ||
|id=chr10:121464235..121464249,+ | |id=chr10:121464235..121464249,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.53e-59!42;CL:0000860!6.88e-55!45;CL:0000738!2.35e-43!140;CL:0002087!1.22e-42!119;CL:0000766!1.86e-39!76;CL:0002194!2.29e-39!63;CL:0000576!2.29e-39!63;CL:0000040!2.29e-39!63;CL:0000559!2.29e-39!63;CL:0002031!2.16e-38!124;CL:0002009!5.95e-38!65;CL:0000839!9.21e-35!70;CL:0000557!3.54e-34!71;CL:0002032!1.74e-33!165;CL:0000837!1.74e-33!165;CL:0000037!1.98e-33!172;CL:0000566!1.98e-33!172;CL:0000988!4.87e-31!182;CL:0000763!3.77e-26!112;CL:0000049!3.77e-26!112;CL:0000767!9.75e-12!3;CL:0000134!8.70e-11!358;CL:0002320!2.19e-10!365;CL:0000219!5.61e-09!390;CL:0000815!3.25e-08!2;CL:0000792!3.25e-08!2;CL:0002677!3.25e-08!2;CL:0000034!2.19e-07!444;CL:0000838!2.27e-07!52;CL:0000048!2.65e-07!430;CL:0000542!3.47e-07!53;CL:0000051!3.47e-07!53;CL:0000723!4.57e-07!436 | |ontology_enrichment_celltype=CL:0002057!2.53e-59!42;CL:0000860!6.88e-55!45;CL:0000738!2.35e-43!140;CL:0002087!1.22e-42!119;CL:0000766!1.86e-39!76;CL:0002194!2.29e-39!63;CL:0000576!2.29e-39!63;CL:0000040!2.29e-39!63;CL:0000559!2.29e-39!63;CL:0002031!2.16e-38!124;CL:0002009!5.95e-38!65;CL:0000839!9.21e-35!70;CL:0000557!3.54e-34!71;CL:0002032!1.74e-33!165;CL:0000837!1.74e-33!165;CL:0000037!1.98e-33!172;CL:0000566!1.98e-33!172;CL:0000988!4.87e-31!182;CL:0000763!3.77e-26!112;CL:0000049!3.77e-26!112;CL:0000767!9.75e-12!3;CL:0000134!8.70e-11!358;CL:0002320!2.19e-10!365;CL:0000219!5.61e-09!390;CL:0000815!3.25e-08!2;CL:0000792!3.25e-08!2;CL:0002677!3.25e-08!2;CL:0000034!2.19e-07!444;CL:0000838!2.27e-07!52;CL:0000048!2.65e-07!430;CL:0000542!3.47e-07!53;CL:0000051!3.47e-07!53;CL:0000723!4.57e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.34e-43;33!CL:0002057;3.34e-43;33!CL:0000473;5.15e-31;39!CL:0000234;5.15e-31;39!CL:0000576;1.40e-24;48!CL:0000766;1.46e-24;69!CL:0002087;5.36e-10;104!CL:0000763;6.65e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.65e-46,42;CL:0002057,1.65e-46,42;CL:0000473,1.12e-40,48;CL:0000234,1.12e-40,48;CL:0002194,1.68e-32,59;CL:0000576,1.68e-32,59;CL:0000040,1.68e-32,59;CL:0000559,1.68e-32,59;CL:0002009,1.91e-31,61;CL:0000839,4.41e-29,66;CL:0000557,1.19e-28,67;CL:0000766,1.14e-26,72;CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0002087,1.17e-16,115;CL:0002031,5.91e-16,120;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.59e-32;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.44e-29!80;UBERON:0001474!4.99e-27!86;UBERON:0002390!2.39e-25!102;UBERON:0003061!2.39e-25!102;UBERON:0002193!3.73e-24!112;UBERON:0004765!5.42e-22!101;UBERON:0001434!5.42e-22!101;UBERON:0002405!1.13e-21!115;UBERON:0002204!1.26e-10!167;UBERON:0002384!7.69e-10!375;UBERON:0003081!5.94e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.86e-25,76;UBERON:0001474,2.01e-23,82;UBERON:0004765,2.46e-21,90;UBERON:0002405,1.21e-20,93;UBERON:0002390,1.39e-19,98;UBERON:0003061,1.39e-19,98;UBERON:0001434,3.44e-19,100;UBERON:0002193,9.38e-18,108;UBERON:0002204,2.30e-11,167;UBERON:0003081,2.88e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0.802177789880567,1.08505435357926,0,0,0,0,0,0.242584061187816,0.464858073811369,2.05583944010913,0,0.863077176966451,0.256160706529101,0.945928919554341,13.1003358679915,13.5551783552603,4.06279459783025,0,0,0.449446968890169,3.06083892370903,6.41858054152187,5.11469700639233,0,0.199463657621632,0,0.580418477257168,0,0,0.251248665256743,0.521482918420201,0.65156653411535,0.605399502633369,1.47311054395026,1.58231193720442,0.422510572623884,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0,0.294605907474837,0.443067789167242,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0.802177789880567,1.08505435357926,0,0,0,0,0,0.242584061187816,0.464858073811369,2.05583944010913,0,0.863077176966451,0.256160706529101,0.945928919554341,13.1003358679915,13.5551783552603,4.06279459783025,0,0,0.449446968890169,3.06083892370903,6.41858054152187,5.11469700639233,0,0.199463657621632,0,0.580418477257168,0,0,0.251248665256743,0.521482918420201,0.65156653411535,0.605399502633369,1.47311054395026,1.58231193720442,0.422510572623884,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0,0.294605907474837,0.443067789167242,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:121464235..121464249,+ | |short_description=p@chr10:121464235..121464249,+ | ||
}} | }} |
Latest revision as of 11:01, 23 July 2015
Short description: | p@chr10:121464235..121464249, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:121464235..121464249, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.65e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-46 | 42 |
defensive cell | 1.12e-40 | 48 |
phagocyte | 1.12e-40 | 48 |
monopoietic cell | 1.68e-32 | 59 |
monocyte | 1.68e-32 | 59 |
monoblast | 1.68e-32 | 59 |
promonocyte | 1.68e-32 | 59 |
macrophage dendritic cell progenitor | 1.91e-31 | 61 |
myeloid lineage restricted progenitor cell | 4.41e-29 | 66 |
granulocyte monocyte progenitor cell | 1.19e-28 | 67 |
myeloid leukocyte | 1.14e-26 | 72 |
myeloid cell | 9.38e-18 | 108 |
common myeloid progenitor | 9.38e-18 | 108 |
nongranular leukocyte | 1.17e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.91e-16 | 120 |
leukocyte | 4.83e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.86e-25 | 76 |
bone element | 2.01e-23 | 82 |
skeletal element | 2.46e-21 | 90 |
immune system | 1.21e-20 | 93 |
hematopoietic system | 1.39e-19 | 98 |
blood island | 1.39e-19 | 98 |
skeletal system | 3.44e-19 | 100 |
hemolymphoid system | 9.38e-18 | 108 |
musculoskeletal system | 2.30e-11 | 167 |
lateral plate mesoderm | 2.88e-09 | 203 |