FFCP PHASE1:Hg19::chr10:131762504..131762555,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=253738 | |EntrezGene=entrezgene:253738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=19087 | |HGNC=HGNC:19087 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000471715_5end | |association_with_transcript=0bp_to_ENST00000471715_5end | ||
|cluster_id=chr10:131762504..131762555,- | |||
|coexpression_cluster_id=C2990 | |coexpression_cluster_id=C2990 | ||
|description=CAGE_peak_1_at_EBF3_5end | |description=CAGE_peak_1_at_EBF3_5end |
Revision as of 11:41, 23 July 2015
Short description: | p1@EBF3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EBF3_5end |
Coexpression cluster: | C2990_neuroectodermal_acute_skeletal_Myoblast_rectum_synovial_sacrococcigeal |
Association with transcript: | 0bp_to_ENST00000471715_5end |
EntrezGene: | 253738 |
HGNC: | 19087 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@EBF3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.77e-10 | 12 |
fibroblast | 1.20e-09 | 76 |
fat cell | 1.66e-08 | 15 |
muscle precursor cell | 1.94e-08 | 58 |
myoblast | 1.94e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.94e-08 | 58 |
cell of skeletal muscle | 7.83e-08 | 9 |
muscle cell | 5.18e-07 | 55 |
cardiocyte | 6.95e-07 | 16 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.86e-13 | 27 |
heart | 7.26e-12 | 24 |
primitive heart tube | 7.26e-12 | 24 |
primary heart field | 7.26e-12 | 24 |
anterior lateral plate mesoderm | 7.26e-12 | 24 |
heart tube | 7.26e-12 | 24 |
heart primordium | 7.26e-12 | 24 |
cardiac mesoderm | 7.26e-12 | 24 |
cardiogenic plate | 7.26e-12 | 24 |
heart rudiment | 7.26e-12 | 24 |
Showing 1 to 10 of 28 entries
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.31e-08 | 10 |
Showing 1 to 1 of 1 entries