FFCP PHASE1:Hg19::chr10:133108095..133108098,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:133108095..133108098,- | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr10:133108095..133108098,- | |description=CAGE_peak_at_chr10:133108095..133108098,- | ||
|id=chr10:133108095..133108098,- | |id=chr10:133108095..133108098,- | ||
|ontology_enrichment_celltype=CL:0000147!1.50e-07!14;CL:0000080!1.65e-07!6 | |ontology_enrichment_celltype=CL:0000147!1.50e-07!14;CL:0000080!1.65e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000817;4.59e-23;1!CL:0000047;3.06e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,1.51e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!8.03e-07!10 | |ontology_enrichment_disease=DOID:171!8.03e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;8.27e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.74e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.66e-22!90;UBERON:0003075!2.49e-17!86;UBERON:0007284!2.49e-17!86;UBERON:0005743!3.76e-17!86;UBERON:0001049!1.86e-16!57;UBERON:0005068!1.86e-16!57;UBERON:0006241!1.86e-16!57;UBERON:0007135!1.86e-16!57;UBERON:0000073!3.24e-16!94;UBERON:0001016!3.24e-16!94;UBERON:0001017!1.53e-15!82;UBERON:0002619!2.56e-15!22;UBERON:0001950!1.47e-14!20;UBERON:0003056!1.92e-13!61;UBERON:0000956!3.44e-13!25;UBERON:0000203!3.44e-13!25;UBERON:0001869!4.19e-13!32;UBERON:0002780!7.42e-13!41;UBERON:0001890!7.42e-13!41;UBERON:0006240!7.42e-13!41;UBERON:0002616!1.10e-12!59;UBERON:0003080!1.86e-12!42;UBERON:0000955!2.76e-12!69;UBERON:0006238!2.76e-12!69;UBERON:0007023!2.80e-12!115;UBERON:0001893!3.80e-12!34;UBERON:0000924!4.09e-12!173;UBERON:0006601!4.09e-12!173;UBERON:0002020!4.29e-12!34;UBERON:0003528!4.29e-12!34;UBERON:0002791!7.15e-11!33;UBERON:0000200!6.99e-10!6;UBERON:0004121!4.01e-09!169;UBERON:0000033!8.18e-09!123;UBERON:0001896!3.97e-08!3;UBERON:0005290!3.97e-08!3;UBERON:0010096!3.97e-08!3;UBERON:0000153!4.23e-08!129;UBERON:0007811!4.23e-08!129;UBERON:0002771!8.10e-08!3;UBERON:0001871!1.52e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.47e-20;10!UBERON:0000178;5.89e-14;15!UBERON:0000179;5.89e-14;15!UBERON:0000463;5.89e-14;15!UBERON:0000922;1.14e-09;49!UBERON:0000478;5.73e-09;24!UBERON:0002390;6.06e-07;32!UBERON:0002346;6.87e-07;4!UBERON:0000923;6.87e-07;4!UBERON:0010316;6.87e-07;4!UBERON:0005291;6.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.47e-20,10;UBERON:0000358,1.47e-20,10;UBERON:0000307,1.47e-20,10;UBERON:0000091,1.47e-20,10;UBERON:0000087,1.47e-20,10;UBERON:0007010,1.47e-20,10;UBERON:0007806,1.47e-20,10;UBERON:0008780,1.47e-20,10;UBERON:0005728,1.47e-20,10;UBERON:0000178,5.89e-14,15;UBERON:0000179,5.89e-14,15;UBERON:0000463,5.89e-14,15;UBERON:0000478,5.73e-09,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,1.00988449083511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,1.37897349296586,0.583209226766509,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96521128680622,2.47127877893006,3.44592433368003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57265941855896,0,0.848662649770126,4.03892348193197,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0.484426936895553,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.620060389503552,0.253663240775627,0,0,0,0.703484977438482,0,0,0,0,0.455324382702595,0,0,0,0,0.197318320688547,0,0,0,0,0,0,0,0,0.142953088353313,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0.203977659483963,0,0.643264296743914,0.50141507858475,0.227336094654718,0,0.829169439458779,0,0,0,0,0,0,0.12729431655633,10.9143282037438,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,1.00988449083511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,1.37897349296586,0.583209226766509,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96521128680622,2.47127877893006,3.44592433368003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57265941855896,0,0.848662649770126,4.03892348193197,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0.484426936895553,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.620060389503552,0.253663240775627,0,0,0,0.703484977438482,0,0,0,0,0.455324382702595,0,0,0,0,0.197318320688547,0,0,0,0,0,0,0,0,0.142953088353313,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0.203977659483963,0,0.643264296743914,0.50141507858475,0.227336094654718,0,0.829169439458779,0,0,0,0,0,0,0.12729431655633,10.9143282037438,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr10:133108095..133108098,- | |short_description=p@chr10:133108095..133108098,- | ||
}} | }} |
Latest revision as of 11:42, 23 July 2015
Short description: | p@chr10:133108095..133108098, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:133108095..133108098, - |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.47e-20 | 10 |
blastocyst | 1.47e-20 | 10 |
blastula | 1.47e-20 | 10 |
bilaminar disc | 1.47e-20 | 10 |
inner cell mass | 1.47e-20 | 10 |
cleaving embryo | 1.47e-20 | 10 |
connecting stalk | 1.47e-20 | 10 |
inner cell mass derived epiblast | 1.47e-20 | 10 |
extraembryonic mesoderm | 1.47e-20 | 10 |
blood | 5.89e-14 | 15 |
haemolymphatic fluid | 5.89e-14 | 15 |
organism substance | 5.89e-14 | 15 |
extraembryonic structure | 5.73e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.74e-10 | 10 |