FFCP PHASE1:Hg19::chr10:26771179..26771190,-: Difference between revisions
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|id=chr10:26771179..26771190,-
|short_description=p@chr10:26771179..26771190,-
|description=CAGE_peak_at_chr10:26771179..26771190,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:26771179..26771190,- | |||
|description=CAGE_peak_at_chr10:26771179..26771190,- | |||
|id=chr10:26771179..26771190,- | |||
|ontology_enrichment_celltype=CL:0000738!2.01e-26!140;CL:0002087!4.87e-23!119;CL:0000037!1.15e-21!172;CL:0000566!1.15e-21!172;CL:0002031!1.77e-20!124;CL:0000988!8.02e-20!182;CL:0002032!2.05e-19!165;CL:0000837!2.05e-19!165;CL:0000791!3.82e-19!18;CL:0000789!3.82e-19!18;CL:0002420!3.82e-19!18;CL:0002419!3.82e-19!18;CL:0000790!3.82e-19!18;CL:0000838!8.26e-19!52;CL:0000542!2.42e-18!53;CL:0000051!2.42e-18!53;CL:0000624!2.65e-17!6;CL:0000084!5.54e-13!25;CL:0000827!5.54e-13!25;CL:0000898!9.35e-10!3;CL:0000623!9.75e-09!3;CL:0000825!9.75e-09!3;CL:0000842!2.39e-08!3;CL:0002057!1.10e-07!42;CL:0000625!1.11e-07!11;CL:0000815!4.73e-07!2;CL:0000792!4.73e-07!2;CL:0002677!4.73e-07!2;CL:0000860!5.47e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000898;4.55e-35;3!CL:0000815;5.35e-24;2!CL:0000792;5.35e-24;2!CL:0002677;5.35e-24;2!CL:0000624;6.69e-18;6!CL:0000895;6.82e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000898,2.25e-35,3;CL:0000815,3.34e-24,2;CL:0000792,3.34e-24,2;CL:0002677,3.34e-24,2;CL:0000624,4.72e-18,6;CL:0000810,5.38e-13,1;CL:0000895,5.38e-13,1;CL:0002436,5.38e-13,1;CL:0002427,5.38e-13,1;CL:0002428,5.38e-13,1;CL:0002429,5.38e-13,1;CL:0002433,5.38e-13,1;CL:0002431,5.38e-13,1;CL:0002432,5.38e-13,1;CL:0000893,3.93e-07,2;CL:0002489,3.93e-07,2;CL:0000809,3.93e-07,2;CL:0000808,3.93e-07,2;CL:0000894,3.93e-07,2;CL:0000806,3.93e-07,2;CL:0000807,3.93e-07,2;CL:0000805,3.93e-07,2;CL:0002425,3.93e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002427;6.82e-13;1!CL:0002425;4.42e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.32e-12!102;UBERON:0003061!7.32e-12!102;UBERON:0002193!3.58e-11!112;UBERON:0000178!3.03e-10!15;UBERON:0000179!3.03e-10!15;UBERON:0000463!3.03e-10!15;UBERON:0002370!2.09e-07!4;UBERON:0005058!2.09e-07!4;UBERON:0009113!2.09e-07!4;UBERON:0003295!2.09e-07!4;UBERON:0005562!2.09e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.35e-07;2!UBERON:0005058;2.35e-07;2!UBERON:0009113;2.35e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.70e-13,4;UBERON:0005058,7.70e-13,4;UBERON:0009113,7.70e-13,4;UBERON:0003295,7.70e-13,4;UBERON:0005562,7.70e-13,4;UBERON:0003351,7.33e-09,6;UBERON:0004177,1.02e-07,7;UBERON:0005057,1.02e-07,7 | |||
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| ||
|short_description=p@chr10:26771179..26771190,- | |||
}} | }} |
Latest revision as of 12:50, 23 July 2015
Short description: | p@chr10:26771179..26771190, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:26771179..26771190, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
naive T cell | 2.25e-35 | 3 |
regulatory T cell | 3.34e-24 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.34e-24 | 2 |
naive regulatory T cell | 3.34e-24 | 2 |
CD4-positive, alpha-beta T cell | 4.72e-18 | 6 |
CD4-positive, alpha-beta thymocyte | 5.38e-13 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.38e-13 | 1 |
mature CD4 single-positive thymocyte | 5.38e-13 | 1 |
resting double-positive thymocyte | 5.38e-13 | 1 |
double-positive blast | 5.38e-13 | 1 |
CD69-positive double-positive thymocyte | 5.38e-13 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 5.38e-13 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.38e-13 | 1 |
CD24-positive, CD4 single-positive thymocyte | 5.38e-13 | 1 |
thymocyte | 3.93e-07 | 2 |
double negative thymocyte | 3.93e-07 | 2 |
double-positive, alpha-beta thymocyte | 3.93e-07 | 2 |
DN4 thymocyte | 3.93e-07 | 2 |
DN1 thymic pro-T cell | 3.93e-07 | 2 |
DN2 thymocyte | 3.93e-07 | 2 |
DN3 thymocyte | 3.93e-07 | 2 |
immature single positive thymocyte | 3.93e-07 | 2 |
early T lineage precursor | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.70e-13 | 4 |
hemolymphoid system gland | 7.70e-13 | 4 |
thymic region | 7.70e-13 | 4 |
pharyngeal gland | 7.70e-13 | 4 |
thymus primordium | 7.70e-13 | 4 |
pharyngeal epithelium | 7.33e-09 | 6 |
hemopoietic organ | 1.02e-07 | 7 |
immune organ | 1.02e-07 | 7 |