FFCP PHASE1:Hg19::chr10:30876672..30876682,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:30876672..30876682,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:30876672..30876682,- | |description=CAGE_peak_at_chr10:30876672..30876682,- | ||
|id=chr10:30876672..30876682,- | |id=chr10:30876672..30876682,- | ||
|ontology_enrichment_celltype=CL:0000860;1.79e-59;33!CL:0002057;1.79e-59;33!CL:0000473;1.68e-44;39!CL:0000234;1.68e-44;39!CL:0000576;5.90e-24;48!CL:0000766;2.71e-19;69!CL:0002087;9.09e-14;104!CL:0000763;1.66e-12;100 | |ontology_enrichment_celltype=CL:0002057!4.93e-60!42;CL:0000860!5.57e-56!45;CL:0002194!4.03e-39!63;CL:0000576!4.03e-39!63;CL:0000040!4.03e-39!63;CL:0000559!4.03e-39!63;CL:0002009!6.56e-38!65;CL:0000839!3.53e-35!70;CL:0000557!1.12e-34!71;CL:0000766!2.28e-32!76;CL:0000763!9.38e-22!112;CL:0000049!9.38e-22!112;CL:0002087!1.99e-20!119;CL:0002031!1.44e-19!124;CL:0000738!3.14e-17!140;CL:0002032!1.80e-14!165;CL:0000837!1.80e-14!165;CL:0000037!7.67e-14!172;CL:0000566!7.67e-14!172;CL:0000988!5.05e-13!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.79e-59;33!CL:0002057;1.79e-59;33!CL:0000473;1.68e-44;39!CL:0000234;1.68e-44;39!CL:0000576;5.90e-24;48!CL:0000766;2.71e-19;69!CL:0002087;9.09e-14;104!CL:0000763;1.66e-12;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.22e-51,42;CL:0002057,5.22e-51,42;CL:0000473,1.37e-44,48;CL:0000234,1.37e-44,48;CL:0002194,1.37e-35,59;CL:0000576,1.37e-35,59;CL:0000040,1.37e-35,59;CL:0000559,1.37e-35,59;CL:0002009,1.98e-34,61;CL:0000839,7.93e-32,66;CL:0000557,2.37e-31,67;CL:0000766,3.58e-29,72;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0002087,3.68e-18,115;CL:0002031,2.20e-17,120;CL:0000738,2.78e-15,136;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.96e-33;42!CL:0000049;6.95e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.00e-30!80;UBERON:0001474!1.52e-28!86;UBERON:0004765!3.31e-24!101;UBERON:0001434!3.31e-24!101;UBERON:0002390!5.81e-24!102;UBERON:0003061!5.81e-24!102;UBERON:0002193!9.38e-22!112;UBERON:0002405!3.64e-21!115;UBERON:0002204!2.75e-14!167;UBERON:0003081!8.44e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.24e-27,76;UBERON:0001474,1.34e-25,82;UBERON:0004765,2.65e-23,90;UBERON:0002405,1.53e-22,93;UBERON:0002390,2.24e-21,98;UBERON:0003061,2.24e-21,98;UBERON:0001434,6.08e-21,100;UBERON:0002193,2.30e-19,108;UBERON:0002204,2.44e-12,167;UBERON:0003081,4.95e-10,203 | |||
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|short_description=p@chr10:30876672..30876682,- | |short_description=p@chr10:30876672..30876682,- | ||
}} | }} |
Latest revision as of 13:10, 23 July 2015
Short description: | p@chr10:30876672..30876682, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:30876672..30876682, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.22e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.22e-51 | 42 |
defensive cell | 1.37e-44 | 48 |
phagocyte | 1.37e-44 | 48 |
monopoietic cell | 1.37e-35 | 59 |
monocyte | 1.37e-35 | 59 |
monoblast | 1.37e-35 | 59 |
promonocyte | 1.37e-35 | 59 |
macrophage dendritic cell progenitor | 1.98e-34 | 61 |
myeloid lineage restricted progenitor cell | 7.93e-32 | 66 |
granulocyte monocyte progenitor cell | 2.37e-31 | 67 |
myeloid leukocyte | 3.58e-29 | 72 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
nongranular leukocyte | 3.68e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.20e-17 | 120 |
leukocyte | 2.78e-15 | 136 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.24e-27 | 76 |
bone element | 1.34e-25 | 82 |
skeletal element | 2.65e-23 | 90 |
immune system | 1.53e-22 | 93 |
hematopoietic system | 2.24e-21 | 98 |
blood island | 2.24e-21 | 98 |
skeletal system | 6.08e-21 | 100 |
hemolymphoid system | 2.30e-19 | 108 |
musculoskeletal system | 2.44e-12 | 167 |
lateral plate mesoderm | 4.95e-10 | 203 |