FFCP PHASE1:Hg19::chr10:33218129..33218133,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:33218129..33218133,- | |||
|description=CAGE_peak_at_chr10:33218129..33218133,- | |description=CAGE_peak_at_chr10:33218129..33218133,- | ||
|id=chr10:33218129..33218133,- | |id=chr10:33218129..33218133,- | ||
|ontology_enrichment_celltype=CL:0002539;1.07e-10;10!CL:0002174;1.07e-07;1!CL:0000501;1.07e-07;1 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002539;1.07e-10;10!CL:0002174;1.07e-07;1!CL:0000501;1.07e-07;1 | ||
|ontology_enrichment_disease=DOID:3151;2.79e-08;1!DOID:3149;2.79e-08;1!DOID:3112;1.07e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0002539,7.16e-11,10;CL:0002174,1.26e-07,1;CL:0000501,1.26e-07,1 | ||
|ontology_enrichment_uberon=UBERON:0004237;1.07e-10;10!UBERON:0004695;1.07e-10;10!UBERON:0002111;1.07e-10;10!UBERON:0004178;1.07e-10;10!UBERON:0000941;1.07e-07;1!UBERON:0001785;1.07e-07;1!UBERON:0002464;1.07e-07;1!UBERON:0004904;1.07e-07;1!UBERON:0001021;1.07e-07;1!UBERON:0000947;1.13e-07;21!UBERON:0010191;1.13e-07;21!UBERON:0001135;3.66e-07;15 | |ontology_enrichment_development_v019=UBERON:0005425;1.07e-07;1 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;2.79e-08;1!DOID:3149;2.79e-08;1!DOID:3112;1.07e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.89e-08,1;DOID:3149,2.89e-08,1;DOID:3112,8.51e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.07e-10;10!UBERON:0004695;1.07e-10;10!UBERON:0002111;1.07e-10;10!UBERON:0004178;1.07e-10;10!UBERON:0000941;1.07e-07;1!UBERON:0001785;1.07e-07;1!UBERON:0002464;1.07e-07;1!UBERON:0004904;1.07e-07;1!UBERON:0001021;1.07e-07;1!UBERON:0000947;1.13e-07;21!UBERON:0010191;1.13e-07;21!UBERON:0001135;3.66e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,7.16e-11,10;UBERON:0004695,7.16e-11,10;UBERON:0002111,7.16e-11,10;UBERON:0004178,7.16e-11,10;UBERON:0000947,9.55e-08,21;UBERON:0010191,9.55e-08,21;UBERON:0000941,1.04e-07,1;UBERON:0001785,1.04e-07,1;UBERON:0002464,1.04e-07,1;UBERON:0004904,1.04e-07,1;UBERON:0001021,1.04e-07,1;UBERON:0003902,1.04e-07,1;UBERON:0005425,1.04e-07,1;UBERON:0001135,2.82e-07,15 | |||
|phase1_expression=0,0.856402095563933,0,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,2.01697543935533,2.41077811209591,0.730310090387373,1.95173119516203,0.492484232307152,0.204000691244253,0.313454721478088,0.286235987131057,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.387336002901508,0,0,0,1.40381113229099,0.434021741431704,0.223915474239924,0.32389366601898,0,0,0,0,0.697287110717054,0,0.619412741790207,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0,0.612167784741805,0,0,0.329851300186716,0,0.426224750532694,0.580418477257168,0,0,0.75374599577023,0,0.217188844705117,1.81619850790011,0.368277635987565,0.316462387440884,0.633765858935825,0,0,0.561643155732475,0.450530678524519,0,0.285012743741249,0.39783335439818,0.730656615058536,0,0,0,0.853460445133014,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,1.57204305099666,0.822405995998037,0,0,0.473447805734733,0,0.222820913770347,1.17842362989935,0.664601683750863,0,0.128091319725675,0.390178042679635,0,0,0,0,0.267540828089713,0,0.226618685395132,0,0,0,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0.821127996921047,0.201606743224732,1.33720097891754,0.289648807765598,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0,0.398873881556595,0,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,2.0078563452417,0.354668382198357,0,0,0,0,0,0.490385709340376,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0.113432183160021,0.89694817844431,0,0.211931901159562,0.300091096084402,0,0.772921620136887,0,0.506328996723799,0.0974370051611986,0.757301322732344,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0.514414748524284,0,0.532844358032199,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0.591092280605782,2.15627574859517,0.385029108839245,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0.535286966391485,0,2.10854546986884,0,0,0,0.664225598535437,0,0.260650843404249,0.195801157462741,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0,0.920771839728375,0.280660094433074,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0.460404944679482,0,0,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0.154048617114644,0.307007349452259,0.413509717453592,0.537101224341368,0,0,0,0.330569830721956,0.576570202095319,0.765676274967505,0.10115778085555,0,1.88887408098384,0,0,0,0,0.18532421910392,0,0.744316738719335,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0.633322905892992,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,1.92495971052672,0.245040215981032,0.185803175125719,0,0.142283686696828,0,0,0,0.211673582723883,0.649243880549111,0.561594356226918,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,2.22886768554957,0,0,0,0,0,0,2.11486539543521,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0.718946809178615,0.537063524026827,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.547364367646998,0,0,0,2.41981432097328,0.30607276163049,0.063186579628488,0,0,0,0.661983911750998,0.313932918407225,0,0,1.94144542218394,0.347119476670262,0.0979923974143777,0.34823682632161,0.698906672968121,0.171986032471617,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.993573058514948,0.0633107959558787,0,0.160317640503067,0,0,0,0,0.171594997861965,0,0.124252535565433,3.06402245001834,0,0,0.101998217636322,0,0,0.273810757783986,0,1.28929632425987,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0.295282444544246,0.0846733320657845,0,0,0,0,0,0,0.77380195455795,0,3.01891218839339,0,0,0,0,0.191915197319445,0,0,1.27134268827375,0,0,0.326587360109409,0,0,0.681552087141687,0,0,0,0,0.13223260174269,2.05304205461195,0,0.320362237703084,0,0.828478110694391,0,0.197611631897944,0,0,0,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0,0.573409195690071,0.221858103073705,0.0620964029413835,0.415045904808692,0,0,0,0,0.468334905806882,0.28984205722165,0,0.233713309847224,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| ||
|short_description=p@chr10:33218129..33218133,- | |short_description=p@chr10:33218129..33218133,- | ||
}} | }} |
Latest revision as of 13:18, 23 July 2015
Short description: | p@chr10:33218129..33218133, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33218129..33218133, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 7.16e-11 | 10 |
follicular cell of ovary | 1.26e-07 | 1 |
granulosa cell | 1.26e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 7.16e-11 | 10 |
arterial system smooth muscle | 7.16e-11 | 10 |
artery smooth muscle tissue | 7.16e-11 | 10 |
aorta smooth muscle tissue | 7.16e-11 | 10 |
aorta | 9.55e-08 | 21 |
aortic system | 9.55e-08 | 21 |
cranial nerve II | 1.04e-07 | 1 |
cranial nerve | 1.04e-07 | 1 |
nerve trunk | 1.04e-07 | 1 |
nerve connecting eye with brain | 1.04e-07 | 1 |
nerve | 1.04e-07 | 1 |
retinal neural layer | 1.04e-07 | 1 |
presumptive neural retina | 1.04e-07 | 1 |
smooth muscle tissue | 2.82e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.89e-08 | 1 |
keratoacanthoma | 2.89e-08 | 1 |
papillary adenocarcinoma | 8.51e-08 | 1 |