FFCP PHASE1:Hg19::chr10:33624520..33624578,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:33624520..33624578,- | |||
|coexpression_cluster_id=C254 | |||
|description=CAGE_peak_at_chr10:33624520..33624578,- | |description=CAGE_peak_at_chr10:33624520..33624578,- | ||
|id=chr10:33624520..33624578,- | |id=chr10:33624520..33624578,- | ||
|ontology_enrichment_celltype=CL:0000055!3.99e-20!180;CL:0000057!2.09e-15!75;CL:0000680!2.81e-09!57;CL:0000056!2.81e-09!57;CL:0000355!2.81e-09!57;CL:0000183!4.20e-09!59;CL:0000187!1.86e-08!54;CL:0000222!2.05e-08!119;CL:0000220!6.62e-08!246;CL:0002321!6.93e-08!248;CL:0000393!1.20e-07!60;CL:0000211!1.20e-07!60;CL:0002620!4.79e-07!23 | |ontology_enrichment_celltype=CL:0000055!3.99e-20!180;CL:0000057!2.09e-15!75;CL:0000680!2.81e-09!57;CL:0000056!2.81e-09!57;CL:0000355!2.81e-09!57;CL:0000183!4.20e-09!59;CL:0000187!1.86e-08!54;CL:0000222!2.05e-08!119;CL:0000220!6.62e-08!246;CL:0002321!6.93e-08!248;CL:0000393!1.20e-07!60;CL:0000211!1.20e-07!60;CL:0002620!4.79e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000188;9.04e-08;9!CL:0002551;1.08e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.09e-12,76;CL:0000188,9.44e-08,9;CL:0002551,1.11e-07,6;CL:0000680,4.05e-07,58;CL:0000056,4.05e-07,58;CL:0000355,4.05e-07,58;CL:0000187,4.20e-07,55;CL:0000393,6.04e-07,61;CL:0000211,6.04e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.38e-15!143;UBERON:0000475!3.88e-15!365;UBERON:0002100!1.79e-14!216;UBERON:0000914!4.34e-13!83;UBERON:0002329!4.34e-13!83;UBERON:0003077!4.34e-13!83;UBERON:0003059!4.34e-13!83;UBERON:0007282!4.34e-13!83;UBERON:0009618!4.34e-13!83;UBERON:0007285!4.34e-13!83;UBERON:0000481!4.45e-13!347;UBERON:0000119!1.24e-12!312;UBERON:0000483!1.26e-12!309;UBERON:0004290!4.18e-11!70;UBERON:0000468!4.31e-11!659;UBERON:0003914!5.18e-11!118;UBERON:0003102!9.12e-11!95;UBERON:0003104!1.05e-10!238;UBERON:0009142!1.05e-10!238;UBERON:0000486!1.90e-10!82;UBERON:0000467!1.38e-09!625;UBERON:0000480!2.07e-09!626;UBERON:0001134!4.45e-09!61;UBERON:0002036!4.45e-09!61;UBERON:0003082!4.45e-09!61;UBERON:0002385!6.19e-09!63;UBERON:0001015!6.19e-09!63;UBERON:0000383!6.19e-09!63;UBERON:0000490!6.29e-09!138;UBERON:0000477!9.51e-09!286;UBERON:0004111!4.55e-08!241;UBERON:0004872!3.59e-07!84;UBERON:0002049!4.23e-07!79;UBERON:0007798!4.23e-07!79;UBERON:0002050!5.33e-07!605;UBERON:0005423!5.33e-07!605;UBERON:0000923!8.26e-07!604;UBERON:0005291!8.26e-07!604;UBERON:0006598!8.26e-07!604;UBERON:0002532!8.26e-07!604;UBERON:0000922!9.62e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.07e-10,160;UBERON:0009142,1.07e-10,160;UBERON:0007503,4.90e-10,78;UBERON:0002329,2.15e-09,71;UBERON:0003059,2.15e-09,71;UBERON:0007282,2.15e-09,71;UBERON:0004290,2.15e-09,71;UBERON:0009618,2.15e-09,71;UBERON:0003077,3.94e-09,72;UBERON:0007285,3.94e-09,72;UBERON:0003914,6.39e-09,117;UBERON:0005256,6.98e-09,122;UBERON:0007524,7.10e-09,73;UBERON:0000490,3.32e-08,148;UBERON:0002100,9.40e-08,199;UBERON:0000483,1.49e-07,306;UBERON:0000486,2.56e-07,83;UBERON:0000119,2.84e-07,309 | |||
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| ||
|short_description=p@chr10:33624520..33624578,- | |short_description=p@chr10:33624520..33624578,- | ||
}} | }} |
Latest revision as of 13:22, 23 July 2015
Short description: | p@chr10:33624520..33624578, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33624520..33624578, - |
Coexpression cluster: | C254_prostate_rhabdomyosarcoma_seminal_Fibroblast_transitionalcell_Smooth_Iris |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.09e-12 | 76 |
cell of skeletal muscle | 9.44e-08 | 9 |
fibroblast of dermis | 1.11e-07 | 6 |
muscle precursor cell | 4.05e-07 | 58 |
myoblast | 4.05e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.05e-07 | 58 |
muscle cell | 4.20e-07 | 55 |
electrically responsive cell | 6.04e-07 | 61 |
electrically active cell | 6.04e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.07e-10 | 160 |
entire embryonic mesenchyme | 1.07e-10 | 160 |
epithelial vesicle | 4.90e-10 | 78 |
somite | 2.15e-09 | 71 |
presomitic mesoderm | 2.15e-09 | 71 |
presumptive segmental plate | 2.15e-09 | 71 |
dermomyotome | 2.15e-09 | 71 |
trunk paraxial mesoderm | 2.15e-09 | 71 |
paraxial mesoderm | 3.94e-09 | 72 |
presumptive paraxial mesoderm | 3.94e-09 | 72 |
epithelial tube | 6.39e-09 | 117 |
trunk mesenchyme | 6.98e-09 | 122 |
dense mesenchyme tissue | 7.10e-09 | 73 |
unilaminar epithelium | 3.32e-08 | 148 |
trunk | 9.40e-08 | 199 |
epithelium | 1.49e-07 | 306 |
multilaminar epithelium | 2.56e-07 | 83 |
cell layer | 2.84e-07 | 309 |