FFCP PHASE1:Hg19::chr10:4915408..4915436,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:4915408..4915436,+ | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_at_chr10:4915408..4915436,+ | |description=CAGE_peak_at_chr10:4915408..4915436,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000080!2.12e-22!6 | |ontology_enrichment_celltype=CL:0000080!2.12e-22!6 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060060!1.54e-15!1;DOID:0060061!1.54e-15!1;DOID:8691!1.54e-15!1;DOID:3493!2.15e-08!2 | |ontology_enrichment_disease=DOID:0060060!1.54e-15!1;DOID:0060061!1.54e-15!1;DOID:8691!1.54e-15!1;DOID:3493!2.15e-08!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!9.99e-16!1;UBERON:0006518!9.99e-16!1;UBERON:0008949!9.99e-16!1;UBERON:0000101!9.99e-16!1;UBERON:0002167!9.99e-16!1;UBERON:0002331!1.05e-13!10;UBERON:0000358!1.05e-13!10;UBERON:0000307!1.05e-13!10;UBERON:0000091!1.05e-13!10;UBERON:0000087!1.05e-13!10;UBERON:0007806!1.05e-13!10;UBERON:0008780!1.05e-13!10;UBERON:0005728!1.05e-13!10;UBERON:0000178!2.49e-09!15;UBERON:0000179!2.49e-09!15;UBERON:0000463!2.49e-09!15;UBERON:0002148!1.86e-08!2;UBERON:0009662!1.86e-08!2 | |ontology_enrichment_uberon=UBERON:0002171!9.99e-16!1;UBERON:0006518!9.99e-16!1;UBERON:0008949!9.99e-16!1;UBERON:0000101!9.99e-16!1;UBERON:0002167!9.99e-16!1;UBERON:0002331!1.05e-13!10;UBERON:0000358!1.05e-13!10;UBERON:0000307!1.05e-13!10;UBERON:0000091!1.05e-13!10;UBERON:0000087!1.05e-13!10;UBERON:0007806!1.05e-13!10;UBERON:0008780!1.05e-13!10;UBERON:0005728!1.05e-13!10;UBERON:0000178!2.49e-09!15;UBERON:0000179!2.49e-09!15;UBERON:0000463!2.49e-09!15;UBERON:0002148!1.86e-08!2;UBERON:0009662!1.86e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.85e-45;10!UBERON:0000178;2.01e-30;15!UBERON:0000179;2.01e-30;15!UBERON:0000463;2.01e-30;15!UBERON:0000478;2.00e-19;24!UBERON:0002390;6.18e-15;32!UBERON:0000922;9.84e-10;49!UBERON:0002193;7.49e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0002331;4.85e-45;10!UBERON:0000178;2.01e-30;15!UBERON:0000179;2.01e-30;15!UBERON:0000463;2.01e-30;15!UBERON:0000478;2.00e-19;24!UBERON:0002390;6.18e-15;32!UBERON:0000922;9.84e-10;49!UBERON:0002193;7.49e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.85e-45,10;UBERON:0000358,4.85e-45,10;UBERON:0000307,4.85e-45,10;UBERON:0000091,4.85e-45,10;UBERON:0000087,4.85e-45,10;UBERON:0007010,4.85e-45,10;UBERON:0007806,4.85e-45,10;UBERON:0008780,4.85e-45,10;UBERON:0005728,4.85e-45,10;UBERON:0000178,2.01e-30,15;UBERON:0000179,2.01e-30,15;UBERON:0000463,2.01e-30,15;UBERON:0000478,2.00e-19,24 | |||
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|short_description=p@chr10:4915408..4915436,+ | |short_description=p@chr10:4915408..4915436,+ | ||
}} | }} |
Latest revision as of 13:54, 23 July 2015
Short description: | p@chr10:4915408..4915436, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4915408..4915436, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.85e-45 | 10 |
blastocyst | 4.85e-45 | 10 |
blastula | 4.85e-45 | 10 |
bilaminar disc | 4.85e-45 | 10 |
inner cell mass | 4.85e-45 | 10 |
cleaving embryo | 4.85e-45 | 10 |
connecting stalk | 4.85e-45 | 10 |
inner cell mass derived epiblast | 4.85e-45 | 10 |
extraembryonic mesoderm | 4.85e-45 | 10 |
blood | 2.01e-30 | 15 |
haemolymphatic fluid | 2.01e-30 | 15 |
organism substance | 2.01e-30 | 15 |
extraembryonic structure | 2.00e-19 | 24 |