FFCP PHASE1:Hg19::chr10:4951559..4951578,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:4951559..4951578,+ | |||
|coexpression_cluster_id=C99 | |coexpression_cluster_id=C99 | ||
|description=CAGE_peak_at_chr10:4951559..4951578,+ | |description=CAGE_peak_at_chr10:4951559..4951578,+ | ||
|id=chr10:4951559..4951578,+ | |id=chr10:4951559..4951578,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000080!1.15e-12!6 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:3151;1.48e-40;1!DOID:3149;1.48e-40;1!DOID:3451;4.66e-21;2!DOID:4159;4.66e-21;2!DOID:0060122;4.66e-21;2 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0002331;7.81e-17;10!UBERON:0000178;1.38e-11;15!UBERON:0000179;1.38e-11;15!UBERON:0000463;1.38e-11;15!UBERON:0000014;3.10e-11;4!UBERON:0000478;1.29e-07;24 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3151!1.89e-09!1;DOID:3149!1.89e-09!1;DOID:0050619!6.22e-09!1;DOID:1357!6.22e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.48e-40;1!DOID:3149;1.48e-40;1!DOID:3451;4.66e-21;2!DOID:4159;4.66e-21;2!DOID:0060122;4.66e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.48e-40,1;DOID:3149,1.48e-40,1;DOID:3451,4.66e-21,2;DOID:4159,4.66e-21,2;DOID:0060122,4.66e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0001764!6.22e-09!1;UBERON:0001825!6.22e-09!1;UBERON:0002372!6.72e-09!1;UBERON:0001961!6.72e-09!1;UBERON:0001744!6.72e-09!1;UBERON:0001735!6.72e-09!1;UBERON:0002331!8.69e-08!10;UBERON:0000358!8.69e-08!10;UBERON:0000307!8.69e-08!10;UBERON:0000091!8.69e-08!10;UBERON:0000087!8.69e-08!10;UBERON:0007806!8.69e-08!10;UBERON:0008780!8.69e-08!10;UBERON:0005728!8.69e-08!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.81e-17;10!UBERON:0000178;1.38e-11;15!UBERON:0000179;1.38e-11;15!UBERON:0000463;1.38e-11;15!UBERON:0000014;3.10e-11;4!UBERON:0000478;1.29e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.51e-17,10;UBERON:0000358,7.51e-17,10;UBERON:0000307,7.51e-17,10;UBERON:0000091,7.51e-17,10;UBERON:0000087,7.51e-17,10;UBERON:0007010,7.51e-17,10;UBERON:0007806,7.51e-17,10;UBERON:0008780,7.51e-17,10;UBERON:0005728,7.51e-17,10;UBERON:0000178,1.34e-11,15;UBERON:0000179,1.34e-11,15;UBERON:0000463,1.34e-11,15;UBERON:0000014,3.10e-11,4;UBERON:0000478,1.27e-07,24 | |||
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|short_description=p@chr10:4951559..4951578,+ | |short_description=p@chr10:4951559..4951578,+ | ||
}} | }} |
Latest revision as of 13:55, 23 July 2015
Short description: | p@chr10:4951559..4951578, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4951559..4951578, + |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 7.51e-17 | 10 |
blastocyst | 7.51e-17 | 10 |
blastula | 7.51e-17 | 10 |
bilaminar disc | 7.51e-17 | 10 |
inner cell mass | 7.51e-17 | 10 |
cleaving embryo | 7.51e-17 | 10 |
connecting stalk | 7.51e-17 | 10 |
inner cell mass derived epiblast | 7.51e-17 | 10 |
extraembryonic mesoderm | 7.51e-17 | 10 |
blood | 1.34e-11 | 15 |
haemolymphatic fluid | 1.34e-11 | 15 |
organism substance | 1.34e-11 | 15 |
zone of skin | 3.10e-11 | 4 |
extraembryonic structure | 1.27e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.48e-40 | 1 |
keratoacanthoma | 1.48e-40 | 1 |
skin carcinoma | 4.66e-21 | 2 |
skin cancer | 4.66e-21 | 2 |
integumentary system cancer | 4.66e-21 | 2 |