FFCP PHASE1:Hg19::chr10:5138548..5138561,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:5138548..5138561,+
|short_description=p@chr10:5138548..5138561,+
|description=CAGE_peak_at_chr10:5138548..5138561,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:5138548..5138561,+ | |||
|coexpression_cluster_id=C1314 | |||
|description=CAGE_peak_at_chr10:5138548..5138561,+ | |||
|id=chr10:5138548..5138561,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.07e-16!12;CL:0000417!3.07e-16!12;CL:0000668!3.07e-16!12;CL:0000414!3.07e-16!12;CL:0000412!3.07e-16!12;CL:0000182!3.07e-16!12 | |||
|ontology_enrichment_celltype_v019=CL:0002553;7.13e-15;1!CL:0000319;1.84e-14;1!CL:0000182;1.74e-10;12!CL:0000159;7.03e-08;2!CL:0000082;5.99e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,7.13e-15,1;CL:0000319,1.84e-14,1;CL:0000182,1.68e-10,12;CL:0000159,7.03e-08,2;CL:0000082,5.99e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;3.08e-11;30 | |||
|ontology_enrichment_disease=DOID:305!6.00e-12!106;DOID:0050687!1.27e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.84e-14;1!DOID:1324;1.14e-08;15!DOID:0050615;3.69e-08;16!DOID:3493;5.94e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.84e-14,1;DOID:1324,1.14e-08,15;DOID:0050615,3.69e-08,16;DOID:3493,6.15e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0009497!8.00e-18!25;UBERON:0000015!8.00e-18!25;UBERON:0002423!8.00e-18!25;UBERON:0006235!8.00e-18!25;UBERON:0004161!8.00e-18!25;UBERON:0001007!4.26e-15!155;UBERON:0001555!4.26e-15!155;UBERON:0007026!4.26e-15!155;UBERON:0004921!4.50e-15!129;UBERON:0004185!4.50e-15!129;UBERON:0008835!7.94e-14!22;UBERON:0003894!7.94e-14!22;UBERON:0004119!2.71e-13!169;UBERON:0000925!2.71e-13!169;UBERON:0006595!2.71e-13!169;UBERON:0009854!3.75e-13!23;UBERON:0002107!9.74e-13!19;UBERON:0006925!9.74e-13!19;UBERON:0008836!9.74e-13!19;UBERON:0000077!2.97e-12!130;UBERON:0007499!5.75e-12!25;UBERON:0009856!1.92e-11!26;UBERON:0001737!5.62e-11!9;UBERON:0001041!1.18e-10!98;UBERON:0002417!5.54e-10!61;UBERON:0000916!5.54e-10!61;UBERON:0005911!3.18e-09!82;UBERON:0005057!5.95e-09!26;UBERON:0009569!1.22e-08!113;UBERON:0003929!2.07e-08!54;UBERON:0000466!2.89e-08!126;UBERON:0005172!3.12e-08!55;UBERON:0005173!3.12e-08!55;UBERON:0005177!3.40e-08!107;UBERON:0002365!2.67e-07!31;UBERON:0002330!2.67e-07!31;UBERON:0008947!3.15e-07!38;UBERON:0003258!3.15e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.18e-11;4!UBERON:0002423;8.96e-09;25!UBERON:0000160;2.95e-07;17!UBERON:0004802;5.99e-07;19!UBERON:0000115;5.99e-07;19!UBERON:0002107;8.12e-07;19!UBERON:0006925;8.12e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.15e-11,4;UBERON:0004921,4.35e-10,118;UBERON:0008835,5.98e-10,22;UBERON:0003894,5.98e-10,22;UBERON:0009854,1.58e-09,23;UBERON:0007499,8.78e-09,25;UBERON:0009497,8.78e-09,25;UBERON:0000015,8.78e-09,25;UBERON:0002423,8.78e-09,25;UBERON:0006235,8.78e-09,25;UBERON:0004161,8.78e-09,25;UBERON:0009856,1.87e-08,26;UBERON:0001007,5.32e-08,145;UBERON:0001555,5.32e-08,145;UBERON:0007026,5.32e-08,145;UBERON:0005911,1.98e-07,82;UBERON:0000160,2.92e-07,17;UBERON:0004119,3.86e-07,160;UBERON:0000925,3.86e-07,160;UBERON:0006595,3.86e-07,160;UBERON:0001041,5.75e-07,87;UBERON:0004802,5.99e-07,19;UBERON:0000115,5.99e-07,19;UBERON:0002107,7.96e-07,19;UBERON:0006925,7.96e-07,19;UBERON:0008836,7.96e-07,19 | |||
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| ||
|short_description=p@chr10:5138548..5138561,+ | |||
}} | }} |
Latest revision as of 14:03, 23 July 2015
Short description: | p@chr10:5138548..5138561, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5138548..5138561, + |
Coexpression cluster: | C1314_bile_lung_hepatoma_Hepatocyte_Mast_choriocarcinoma_giant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 7.13e-15 | 1 |
mucus secreting cell | 1.84e-14 | 1 |
hepatocyte | 1.68e-10 | 12 |
seromucus secreting cell | 7.03e-08 | 2 |
epithelial cell of lung | 5.99e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.15e-11 | 4 |
subdivision of digestive tract | 4.35e-10 | 118 |
hepatic diverticulum | 5.98e-10 | 22 |
liver primordium | 5.98e-10 | 22 |
digestive tract diverticulum | 1.58e-09 | 23 |
epithelial sac | 8.78e-09 | 25 |
epithelium of foregut-midgut junction | 8.78e-09 | 25 |
anatomical boundary | 8.78e-09 | 25 |
hepatobiliary system | 8.78e-09 | 25 |
foregut-midgut junction | 8.78e-09 | 25 |
septum transversum | 8.78e-09 | 25 |
sac | 1.87e-08 | 26 |
digestive system | 5.32e-08 | 145 |
digestive tract | 5.32e-08 | 145 |
primitive gut | 5.32e-08 | 145 |
endo-epithelium | 1.98e-07 | 82 |
intestine | 2.92e-07 | 17 |
endoderm-derived structure | 3.86e-07 | 160 |
endoderm | 3.86e-07 | 160 |
presumptive endoderm | 3.86e-07 | 160 |
foregut | 5.75e-07 | 87 |
respiratory tract epithelium | 5.99e-07 | 19 |
lung epithelium | 5.99e-07 | 19 |
liver | 7.96e-07 | 19 |
digestive gland | 7.96e-07 | 19 |
liver bud | 7.96e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.84e-14 | 1 |
lung cancer | 1.14e-08 | 15 |
respiratory system cancer | 3.69e-08 | 16 |
signet ring cell adenocarcinoma | 6.15e-08 | 2 |