FFCP PHASE1:Hg19::chr10:60121572..60121576,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:60121572..60121576,+ | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_at_chr10:60121572..60121576,+ | |description=CAGE_peak_at_chr10:60121572..60121576,+ | ||
|id=chr10:60121572..60121576,+ | |id=chr10:60121572..60121576,+ | ||
|ontology_enrichment_celltype=CL:0000860;1.09e-28;33!CL:0002057;1.09e-28;33!CL:0000473;1.41e-21;39!CL:0000234;1.41e-21;39!CL:0000576;8.36e-20;48!CL:0000766;1.39e-13;69!CL:0002393;1.58e-10;6!CL:0002397;1.58e-10;6!CL:0002087;3.99e-09;104!CL:0000763;2.15e-07;100 | |ontology_enrichment_celltype=CL:0002057!2.97e-22!42;CL:0000860!1.92e-21!45;CL:0000766!9.63e-18!76;CL:0000738!1.00e-17!140;CL:0002009!1.61e-17!65;CL:0000557!3.73e-17!71;CL:0002194!1.30e-16!63;CL:0000576!1.30e-16!63;CL:0000040!1.30e-16!63;CL:0000559!1.30e-16!63;CL:0000839!1.16e-15!70;CL:0002087!3.40e-15!119;CL:0002031!2.47e-14!124;CL:0000037!1.11e-13!172;CL:0000566!1.11e-13!172;CL:0000763!9.25e-13!112;CL:0000049!9.25e-13!112;CL:0002032!1.16e-12!165;CL:0000837!1.16e-12!165;CL:0000988!6.90e-12!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.09e-28;33!CL:0002057;1.09e-28;33!CL:0000473;1.41e-21;39!CL:0000234;1.41e-21;39!CL:0000576;8.36e-20;48!CL:0000766;1.39e-13;69!CL:0002393;1.58e-10;6!CL:0002397;1.58e-10;6!CL:0002087;3.99e-09;104!CL:0000763;2.15e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.20e-37,42;CL:0002057,1.20e-37,42;CL:0000473,3.31e-32,48;CL:0000234,3.31e-32,48;CL:0002009,4.00e-26,61;CL:0000766,1.50e-25,72;CL:0002194,1.34e-24,59;CL:0000576,1.34e-24,59;CL:0000040,1.34e-24,59;CL:0000559,1.34e-24,59;CL:0000557,2.76e-23,67;CL:0000839,1.99e-21,66;CL:0000738,5.60e-21,136;CL:0002087,2.96e-19,115;CL:0000763,5.98e-18,108;CL:0000049,5.98e-18,108;CL:0002031,8.42e-17,120;CL:0000037,1.29e-16,168;CL:0000988,2.34e-15,177;CL:0002032,3.29e-15,161;CL:0000837,3.29e-15,161;CL:0002393,6.60e-07,9;CL:0002397,6.60e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.40e-28;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.53e-14!102;UBERON:0003061!2.53e-14!102;UBERON:0001474!2.38e-12!86;UBERON:0002371!2.59e-12!80;UBERON:0002193!1.45e-11!112;UBERON:0004765!8.33e-10!101;UBERON:0001434!8.33e-10!101;UBERON:0002405!3.35e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.49e-22,98;UBERON:0003061,2.49e-22,98;UBERON:0002371,7.31e-20,76;UBERON:0002193,1.27e-19,108;UBERON:0001474,5.36e-18,82;UBERON:0004765,6.73e-16,90;UBERON:0002405,3.32e-15,93;UBERON:0001434,9.46e-14,100;UBERON:0003081,1.61e-11,203 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,2.00146596706261,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.305653622991805,0.246301768349837,0.314843125254717,1.57345710739562,2.30297638858328,0.77408061658038,0,0,0,0,0.568676929949686,0,10.5259127621057,12.2332112956786,6.94434786290726,0.447830948479849,0.647787332037959,0.257575567634187,0.436194716338694,0,0.727752183563449,0.464858073811369,1.23350366406548,1.23882548358041,1.1507695692886,1.2808035326455,0.945928919554341,9.99762474136194,8.39130088658974,6.77132432971709,0.564727018627814,0.545812300115692,0.224723484445085,5.81559395504715,0.962787081228281,8.95071976118658,1.64925650093358,1.99463657621632,0.852449501065388,2.90209238628584,2.26954089876456,1.86846674698672,3.01498398308092,4.69334626578181,0.65156653411535,3.02699751316684,3.68277635987565,0.316462387440884,0.211255286311942,0.637812899895131,1.04829322754188,0.44931452458598,0.600707571366025,0.64290234678832,0.570025487482497,0.99458338599545,0.91332076882317,1.75996244461323,0,0,0.853460445133014,0,0.574752439954483,0.661044872784862,0,1.1384259382189,1.17447437874188,0.382273228125229,0,1.68152568894461,0,0.786839080455332,1.57204305099666,0.411202997999018,0,0,0.946895611469467,1.94826728407911,0.111410456885174,0.589211814949674,0.221533894583621,0,0.25618263945135,0,0.493313713811028,0.552700035571697,0.289803085735052,0.14828656316206,0,0,0,0,0,0.253019692019503,0.637130828648193,0,0,0,0.511946444617674,0,0.236777252044017,0,0.201606743224732,0,0.434473211648397,0,0.670700859703636,0,0,0,0,0,0,0.378139268656271,0.443458794925128,0.43917392846563,0.196468613246569,0,0,0.97364218096405,0,0.398873881556595,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62028389576352,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.529636723252875,0.860509862246441,0,1.12135520028461,0,0,0,0.538842688278752,0,0,0,0,0.624320153660641,0,0,0,0.485618833104395,0.280901613404497,0.61246251376468,0.491337269247072,0,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0,0.358779271377724,0,0.211931901159562,0.600182192168805,0,0.515281080091258,0,0,0.389748020644795,0.252433774244115,0,0.161646056818812,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0,0.265059536642971,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0,0,1.40241773803446,0.4115740113314,0,0,0,1.18157981336281,0.441463099414651,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0.858486162094873,0.738651018262192,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0.144119953416961,0.50496973370552,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,0,0.61642896765115,0.358121926479791,0,0.591092280605782,0.431255149719035,1.15508732651774,0.254094624222463,1.30139853857622,0.773288812777695,0.335032530668698,0,1.49801404789436,0,0.828831026872071,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0.620304078368662,1.94142780736755,1.06727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.483437798366489,0,0.0920809889358963,0.574072240823034,0.364182336013434,0.131124414959424,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.824328093181778,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.413509717453592,0.214840489736547,0.435050081742686,0.0852266274161009,0.0890320356467374,0.330569830721956,0,1.14851441245126,0.10115778085555,0,0.31481234683064,0.6970372701606,0,0,0,0,0.286249773483982,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0.753150406214233,0,0,0,0.229723400206959,0.507447609232169,1.52927441428475,0.569647187174163,0.238231775457789,2.05681136543097,0.648473311192717,2.16012574895246,0,0,0.962479855263359,0.735120647943095,0.185803175125719,0,0.426851060090485,0,0,0,0.211673582723883,0,0.561594356226918,0.228234679033192,0.156679895773023,0,0.169291777801603,0,0.403599414382095,0.425846237690326,1.03051603426729,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0.121360521749513,0.66866030566487,0.284136146806413,0.23874448473769,0,0.614321404198464,0.994147647766298,0.422008249231538,0.111308705022906,0,1.26675244876796,0.19924798825107,0.552567831062295,0.755798243562828,0.613612095012929,0,0,0.269605053441981,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0.185536196323703,1.99613798001194,0.26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| ||
|short_description=p@chr10:60121572..60121576,+ | |short_description=p@chr10:60121572..60121576,+ | ||
}} | }} |
Latest revision as of 14:18, 23 July 2015
Short description: | p@chr10:60121572..60121576, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:60121572..60121576, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.20e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.20e-37 | 42 |
defensive cell | 3.31e-32 | 48 |
phagocyte | 3.31e-32 | 48 |
macrophage dendritic cell progenitor | 4.00e-26 | 61 |
myeloid leukocyte | 1.50e-25 | 72 |
monopoietic cell | 1.34e-24 | 59 |
monocyte | 1.34e-24 | 59 |
monoblast | 1.34e-24 | 59 |
promonocyte | 1.34e-24 | 59 |
granulocyte monocyte progenitor cell | 2.76e-23 | 67 |
myeloid lineage restricted progenitor cell | 1.99e-21 | 66 |
leukocyte | 5.60e-21 | 136 |
nongranular leukocyte | 2.96e-19 | 115 |
myeloid cell | 5.98e-18 | 108 |
common myeloid progenitor | 5.98e-18 | 108 |
hematopoietic lineage restricted progenitor cell | 8.42e-17 | 120 |
hematopoietic stem cell | 1.29e-16 | 168 |
hematopoietic cell | 2.34e-15 | 177 |
hematopoietic oligopotent progenitor cell | 3.29e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.29e-15 | 161 |
intermediate monocyte | 6.60e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.49e-22 | 98 |
blood island | 2.49e-22 | 98 |
bone marrow | 7.31e-20 | 76 |
hemolymphoid system | 1.27e-19 | 108 |
bone element | 5.36e-18 | 82 |
skeletal element | 6.73e-16 | 90 |
immune system | 3.32e-15 | 93 |
skeletal system | 9.46e-14 | 100 |
lateral plate mesoderm | 1.61e-11 | 203 |