FFCP PHASE1:Hg19::chr10:6066253..6066277,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:6066253..6066277,+ | |||
|coexpression_cluster_id=C3030 | |||
|description=CAGE_peak_at_chr10:6066253..6066277,+ | |description=CAGE_peak_at_chr10:6066253..6066277,+ | ||
|id=chr10:6066253..6066277,+ | |id=chr10:6066253..6066277,+ | ||
|ontology_enrichment_celltype=CL:0000080!9.78e-22!6;CL:0000815!3.16e-11!2;CL:0000792!3.16e-11!2;CL:0002677!3.16e-11!2;CL:0000988!1.96e-09!182;CL:0000084!2.91e-09!25;CL:0000827!2.91e-09!25;CL:0000738!1.62e-08!140;CL:0000624!4.09e-08!6;CL:0000838!7.01e-08!52;CL:0000898!9.23e-08!3;CL:0000542!1.07e-07!53;CL:0000051!1.07e-07!53;CL:0000842!1.63e-07!3;CL:0002087!3.23e-07!119;CL:0000037!4.26e-07!172;CL:0000566!4.26e-07!172;CL:0002031!8.79e-07!124 | |ontology_enrichment_celltype=CL:0000080!9.78e-22!6;CL:0000815!3.16e-11!2;CL:0000792!3.16e-11!2;CL:0002677!3.16e-11!2;CL:0000988!1.96e-09!182;CL:0000084!2.91e-09!25;CL:0000827!2.91e-09!25;CL:0000738!1.62e-08!140;CL:0000624!4.09e-08!6;CL:0000838!7.01e-08!52;CL:0000898!9.23e-08!3;CL:0000542!1.07e-07!53;CL:0000051!1.07e-07!53;CL:0000842!1.63e-07!3;CL:0002087!3.23e-07!119;CL:0000037!4.26e-07!172;CL:0000566!4.26e-07!172;CL:0002031!8.79e-07!124 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.64e-08!10 | |ontology_enrichment_disease=DOID:0060058!1.64e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060060;5.71e-21;1!DOID:0060061;5.71e-21;1!DOID:8691;5.71e-21;1!DOID:0060058;7.22e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.16e-21,1;DOID:0060061,5.16e-21,1;DOID:8691,5.16e-21,1;DOID:0060058,7.07e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.83e-16!15;UBERON:0000179!2.83e-16!15;UBERON:0000463!2.83e-16!15;UBERON:0002193!4.00e-09!112;UBERON:0002390!8.39e-08!102;UBERON:0003061!8.39e-08!102 | |ontology_enrichment_uberon=UBERON:0000178!2.83e-16!15;UBERON:0000179!2.83e-16!15;UBERON:0000463!2.83e-16!15;UBERON:0002193!4.00e-09!112;UBERON:0002390!8.39e-08!102;UBERON:0003061!8.39e-08!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.21e-21;15!UBERON:0000179;1.21e-21;15!UBERON:0000463;1.21e-21;15!UBERON:0002331;1.04e-18;10!UBERON:0002390;7.69e-10;32!UBERON:0000478;3.59e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.28e-21,15;UBERON:0000179,1.28e-21,15;UBERON:0000463,1.28e-21,15;UBERON:0002331,1.07e-18,10;UBERON:0000358,1.07e-18,10;UBERON:0000307,1.07e-18,10;UBERON:0000091,1.07e-18,10;UBERON:0000087,1.07e-18,10;UBERON:0007010,1.07e-18,10;UBERON:0007806,1.07e-18,10;UBERON:0008780,1.07e-18,10;UBERON:0005728,1.07e-18,10;UBERON:0000478,3.63e-08,24 | |||
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|short_description=p@chr10:6066253..6066277,+ | |short_description=p@chr10:6066253..6066277,+ | ||
}} | }} |
Latest revision as of 14:20, 23 July 2015
Short description: | p@chr10:6066253..6066277, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:6066253..6066277, + |
Coexpression cluster: | C3030_cord_CD4_mycosis_adult_anaplastic_hairy_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.28e-21 | 15 |
haemolymphatic fluid | 1.28e-21 | 15 |
organism substance | 1.28e-21 | 15 |
umbilical cord | 1.07e-18 | 10 |
blastocyst | 1.07e-18 | 10 |
blastula | 1.07e-18 | 10 |
bilaminar disc | 1.07e-18 | 10 |
inner cell mass | 1.07e-18 | 10 |
cleaving embryo | 1.07e-18 | 10 |
connecting stalk | 1.07e-18 | 10 |
inner cell mass derived epiblast | 1.07e-18 | 10 |
extraembryonic mesoderm | 1.07e-18 | 10 |
extraembryonic structure | 3.63e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.16e-21 | 1 |
cutaneous T cell lymphoma | 5.16e-21 | 1 |
mycosis fungoides | 5.16e-21 | 1 |
lymphoma | 7.07e-09 | 10 |