FFCP PHASE1:Hg19::chr10:6092967..6092972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:6092967..6092972,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:6092967..6092972,- | |description=CAGE_peak_at_chr10:6092967..6092972,- | ||
|id=chr10:6092967..6092972,- | |id=chr10:6092967..6092972,- | ||
|ontology_enrichment_celltype=CL:0000738!1.12e-26!140;CL:0002031!1.68e-24!124;CL:0002057!8.92e-24!42;CL:0002087!1.49e-23!119;CL:0000988!2.14e-22!182;CL:0000860!1.05e-21!45;CL:0000037!4.11e-21!172;CL:0000566!4.11e-21!172;CL:0002032!3.27e-19!165;CL:0000837!3.27e-19!165;CL:0000766!2.12e-18!76;CL:0000839!3.35e-16!70;CL:0000557!7.26e-16!71;CL:0002194!3.43e-13!63;CL:0000576!3.43e-13!63;CL:0000040!3.43e-13!63;CL:0000559!3.43e-13!63;CL:0002009!1.37e-12!65;CL:0000763!1.17e-10!112;CL:0000049!1.17e-10!112;CL:0000838!3.22e-09!52;CL:0000080!3.61e-09!6;CL:0000542!5.88e-09!53;CL:0000051!5.88e-09!53;CL:0000623!2.05e-07!3;CL:0000825!2.05e-07!3;CL:0002274!9.31e-07!5;CL:0000457!9.31e-07!5;CL:0002191!9.31e-07!5;CL:0000097!9.31e-07!5;CL:0000831!9.31e-07!5;CL:0002028!9.31e-07!5 | |ontology_enrichment_celltype=CL:0000738!1.12e-26!140;CL:0002031!1.68e-24!124;CL:0002057!8.92e-24!42;CL:0002087!1.49e-23!119;CL:0000988!2.14e-22!182;CL:0000860!1.05e-21!45;CL:0000037!4.11e-21!172;CL:0000566!4.11e-21!172;CL:0002032!3.27e-19!165;CL:0000837!3.27e-19!165;CL:0000766!2.12e-18!76;CL:0000839!3.35e-16!70;CL:0000557!7.26e-16!71;CL:0002194!3.43e-13!63;CL:0000576!3.43e-13!63;CL:0000040!3.43e-13!63;CL:0000559!3.43e-13!63;CL:0002009!1.37e-12!65;CL:0000763!1.17e-10!112;CL:0000049!1.17e-10!112;CL:0000838!3.22e-09!52;CL:0000080!3.61e-09!6;CL:0000542!5.88e-09!53;CL:0000051!5.88e-09!53;CL:0000623!2.05e-07!3;CL:0000825!2.05e-07!3;CL:0002274!9.31e-07!5;CL:0000457!9.31e-07!5;CL:0002191!9.31e-07!5;CL:0000097!9.31e-07!5;CL:0000831!9.31e-07!5;CL:0002028!9.31e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-56;33!CL:0002057;1.32e-56;33!CL:0000473;1.31e-38;39!CL:0000234;1.31e-38;39!CL:0000576;9.24e-33;48!CL:0000766;1.03e-21;69!CL:0002087;9.19e-17;104!CL:0002393;2.90e-11;6!CL:0002397;2.90e-11;6!CL:0000763;3.70e-10;100!CL:0000623;4.00e-10;3!CL:0000738;1.53e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.86e-65,42;CL:0002057,5.86e-65,42;CL:0000473,2.18e-56,48;CL:0000234,2.18e-56,48;CL:0002194,2.22e-44,59;CL:0000576,2.22e-44,59;CL:0000040,2.22e-44,59;CL:0000559,2.22e-44,59;CL:0002009,7.86e-43,61;CL:0000839,2.33e-39,66;CL:0000557,9.99e-39,67;CL:0000766,8.04e-36,72;CL:0002087,2.30e-31,115;CL:0002031,3.06e-27,120;CL:0000738,6.49e-26,136;CL:0000763,9.37e-23,108;CL:0000049,9.37e-23,108;CL:0000988,7.56e-21,177;CL:0000037,3.32e-20,168;CL:0002032,2.68e-19,161;CL:0000837,2.68e-19,161;CL:0000623,5.05e-10,3;CL:0000825,5.05e-10,3;CL:0002393,1.15e-07,9;CL:0002397,1.15e-07,9;CL:0000134,2.56e-07,354;CL:0002320,4.33e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.63e-44;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;3.28e-08;1!DOID:0060061;3.28e-08;1!DOID:8691;3.28e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.06e-08,1;DOID:0060061,3.06e-08,1;DOID:8691,3.06e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.52e-20!102;UBERON:0003061!1.52e-20!102;UBERON:0002193!7.88e-19!112;UBERON:0002371!2.14e-14!80;UBERON:0001474!7.53e-13!86;UBERON:0002405!1.51e-11!115;UBERON:0002308!1.97e-10!9;UBERON:0000125!1.97e-10!9;UBERON:0004765!7.96e-10!101;UBERON:0001434!7.96e-10!101;UBERON:0001049!9.00e-10!57;UBERON:0005068!9.00e-10!57;UBERON:0006241!9.00e-10!57;UBERON:0007135!9.00e-10!57;UBERON:0002020!1.96e-09!34;UBERON:0003528!1.96e-09!34;UBERON:0001893!3.88e-09!34;UBERON:0002616!2.86e-08!59;UBERON:0002791!2.98e-08!33;UBERON:0002780!3.33e-08!41;UBERON:0001890!3.33e-08!41;UBERON:0006240!3.33e-08!41;UBERON:0003080!6.31e-08!42;UBERON:0002420!9.08e-08!9;UBERON:0007245!9.08e-08!9;UBERON:0010009!9.08e-08!9;UBERON:0010011!9.08e-08!9;UBERON:0000454!9.08e-08!9;UBERON:0001869!2.84e-07!32;UBERON:0009663!3.66e-07!7;UBERON:0000955!4.63e-07!69;UBERON:0006238!4.63e-07!69;UBERON:0006331!5.54e-07!3;UBERON:0007023!9.23e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!1.52e-20!102;UBERON:0003061!1.52e-20!102;UBERON:0002193!7.88e-19!112;UBERON:0002371!2.14e-14!80;UBERON:0001474!7.53e-13!86;UBERON:0002405!1.51e-11!115;UBERON:0002308!1.97e-10!9;UBERON:0000125!1.97e-10!9;UBERON:0004765!7.96e-10!101;UBERON:0001434!7.96e-10!101;UBERON:0001049!9.00e-10!57;UBERON:0005068!9.00e-10!57;UBERON:0006241!9.00e-10!57;UBERON:0007135!9.00e-10!57;UBERON:0002020!1.96e-09!34;UBERON:0003528!1.96e-09!34;UBERON:0001893!3.88e-09!34;UBERON:0002616!2.86e-08!59;UBERON:0002791!2.98e-08!33;UBERON:0002780!3.33e-08!41;UBERON:0001890!3.33e-08!41;UBERON:0006240!3.33e-08!41;UBERON:0003080!6.31e-08!42;UBERON:0002420!9.08e-08!9;UBERON:0007245!9.08e-08!9;UBERON:0010009!9.08e-08!9;UBERON:0010011!9.08e-08!9;UBERON:0000454!9.08e-08!9;UBERON:0001869!2.84e-07!32;UBERON:0009663!3.66e-07!7;UBERON:0000955!4.63e-07!69;UBERON:0006238!4.63e-07!69;UBERON:0006331!5.54e-07!3;UBERON:0007023!9.23e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.10e-34,76;UBERON:0002390,3.41e-31,98;UBERON:0003061,3.41e-31,98;UBERON:0001474,4.66e-31,82;UBERON:0004765,5.34e-28,90;UBERON:0002193,5.76e-28,108;UBERON:0002405,5.50e-27,93;UBERON:0001434,7.43e-25,100;UBERON:0002204,1.99e-13,167;UBERON:0003081,4.78e-13,203;UBERON:0000926,6.01e-07,315;UBERON:0004120,6.01e-07,315;UBERON:0006603,6.01e-07,315;UBERON:0002384,8.87e-07,371 | |||
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|short_description=p@chr10:6092967..6092972,- | |short_description=p@chr10:6092967..6092972,- | ||
}} | }} |
Latest revision as of 14:20, 23 July 2015
Short description: | p@chr10:6092967..6092972, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:6092967..6092972, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.86e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.86e-65 | 42 |
defensive cell | 2.18e-56 | 48 |
phagocyte | 2.18e-56 | 48 |
monopoietic cell | 2.22e-44 | 59 |
monocyte | 2.22e-44 | 59 |
monoblast | 2.22e-44 | 59 |
promonocyte | 2.22e-44 | 59 |
macrophage dendritic cell progenitor | 7.86e-43 | 61 |
myeloid lineage restricted progenitor cell | 2.33e-39 | 66 |
granulocyte monocyte progenitor cell | 9.99e-39 | 67 |
myeloid leukocyte | 8.04e-36 | 72 |
nongranular leukocyte | 2.30e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 3.06e-27 | 120 |
leukocyte | 6.49e-26 | 136 |
myeloid cell | 9.37e-23 | 108 |
common myeloid progenitor | 9.37e-23 | 108 |
hematopoietic cell | 7.56e-21 | 177 |
hematopoietic stem cell | 3.32e-20 | 168 |
hematopoietic oligopotent progenitor cell | 2.68e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.68e-19 | 161 |
natural killer cell | 5.05e-10 | 3 |
pro-NK cell | 5.05e-10 | 3 |
intermediate monocyte | 1.15e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.15e-07 | 9 |
mesenchymal cell | 2.56e-07 | 354 |
connective tissue cell | 4.33e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.10e-34 | 76 |
hematopoietic system | 3.41e-31 | 98 |
blood island | 3.41e-31 | 98 |
bone element | 4.66e-31 | 82 |
skeletal element | 5.34e-28 | 90 |
hemolymphoid system | 5.76e-28 | 108 |
immune system | 5.50e-27 | 93 |
skeletal system | 7.43e-25 | 100 |
musculoskeletal system | 1.99e-13 | 167 |
lateral plate mesoderm | 4.78e-13 | 203 |
mesoderm | 6.01e-07 | 315 |
mesoderm-derived structure | 6.01e-07 | 315 |
presumptive mesoderm | 6.01e-07 | 315 |
connective tissue | 8.87e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.06e-08 | 1 |
cutaneous T cell lymphoma | 3.06e-08 | 1 |
mycosis fungoides | 3.06e-08 | 1 |