FFCP PHASE1:Hg19::chr10:80917735..80917751,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:80917735..80917751,+ | |||
|description=CAGE_peak_at_chr10:80917735..80917751,+ | |||
|id=chr10:80917735..80917751,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.03e-13!254;CL:0000223!4.23e-11!59;CL:0002076!6.81e-10!43;CL:0002202!1.43e-08!9;CL:0002632!1.43e-08!9;CL:0000076!5.09e-07!62;CL:0000083!5.93e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.39e-27;3!CL:0002202;1.57e-20;9!CL:0002632;1.57e-20;9!CL:0002368;1.94e-14;13!CL:0000322;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.39e-27,3;CL:0000069,1.39e-27,3;CL:0000307,1.39e-27,3;CL:0000377,1.39e-27,3;CL:0002202,1.33e-20,9;CL:0002632,1.33e-20,9;CL:0002368,1.73e-14,13;CL:0000223,1.03e-08,58;CL:0000076,5.32e-08,63;CL:0002076,5.38e-08,42;CL:0000322,5.93e-08,3;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000377;1.39e-27;3!UBERON:0008814;1.82e-11;2!UBERON:0010056;1.82e-11;2 | |||
|ontology_enrichment_disease=DOID:305!4.05e-20!106;DOID:1749!1.66e-19!14;DOID:0050687!2.01e-19!143;DOID:162!4.59e-15!235;DOID:14566!1.66e-14!239;DOID:299!2.93e-09!25;DOID:170!1.21e-07!6;DOID:1793!5.93e-07!4;DOID:4468!6.41e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.19e-23;14!DOID:1799;5.71e-21;1!DOID:10165;5.71e-21;1!DOID:3111;5.71e-21;1!DOID:1798;5.71e-21;1!DOID:3603;5.71e-21;1!DOID:3910;3.52e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.44e-23,14;DOID:3111,4.22e-21,1;DOID:3603,4.22e-21,1;DOID:1799,9.43e-21,1;DOID:10165,9.43e-21,1;DOID:1798,9.43e-21,1;DOID:3910,2.73e-11,2;DOID:305,6.29e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0002114!5.71e-10!12;UBERON:0001264!8.19e-10!10;UBERON:0003922!8.19e-10!10;UBERON:0003923!8.19e-10!10;UBERON:0003924!8.19e-10!10;UBERON:0003921!8.19e-10!10;UBERON:0001045!7.50e-09!11;UBERON:0002108!1.72e-08!14;UBERON:0000344!3.33e-08!12;UBERON:0001007!1.54e-07!155;UBERON:0001555!1.54e-07!155;UBERON:0007026!1.54e-07!155;UBERON:0003343!1.68e-07!4;UBERON:0004785!1.68e-07!4;UBERON:0000077!4.46e-07!130;UBERON:0004119!4.53e-07!169;UBERON:0000925!4.53e-07!169;UBERON:0006595!4.53e-07!169;UBERON:0004921!5.18e-07!129;UBERON:0004185!5.18e-07!129;UBERON:0000464!7.77e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.32e-12;15!UBERON:0001558;1.32e-12;15!UBERON:0003126;2.00e-12;7!UBERON:0001005;2.00e-12;7!UBERON:0004903;3.52e-11;2!UBERON:0002173;3.52e-11;2!UBERON:0002186;3.52e-11;2!UBERON:0001723;4.52e-08;3!UBERON:0001033;4.52e-08;3!UBERON:0004821;7.02e-08;3!UBERON:0007499;7.02e-08;3!UBERON:0003215;7.02e-08;3!UBERON:0010368;7.02e-08;3!UBERON:0009911;7.02e-08;3!UBERON:0002299;7.02e-08;3!UBERON:0006524;7.02e-08;3!UBERON:0008874;7.02e-08;3!UBERON:0002169;7.02e-08;3!UBERON:0004894;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.20e-12,15;UBERON:0001558,1.20e-12,15;UBERON:0003126,2.00e-12,7;UBERON:0001005,2.00e-12,7;UBERON:0004903,2.73e-11,2;UBERON:0002173,2.73e-11,2;UBERON:0002186,2.73e-11,2;UBERON:0001723,4.52e-08,3;UBERON:0001033,4.52e-08,3;UBERON:0010056,4.52e-08,3;UBERON:0004821,5.93e-08,3;UBERON:0003215,5.93e-08,3;UBERON:0010368,5.93e-08,3;UBERON:0009911,5.93e-08,3;UBERON:0002299,5.93e-08,3;UBERON:0006524,5.93e-08,3;UBERON:0008874,5.93e-08,3;UBERON:0002169,5.93e-08,3;UBERON:0004894,5.93e-08,3;UBERON:0000072,3.57e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01090682660736,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0,0,0,0,1.05562704063997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,1.137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0.23056390438806,0.359030577639089,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,0.326465616318295,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0,0.174118413160805,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0.627617077873999,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0.690860683462397,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0.917142992608395,4.04339831526184,0,0,0,0,0,0.781514011233092,1.04762677792569,0,0.443568258651136,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,3.17605384544123,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr10:80917735..80917751,+ | |||
}} |
Latest revision as of 15:53, 23 July 2015
Short description: | p@chr10:80917735..80917751, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:80917735..80917751, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.39e-27 | 3 |
branched duct epithelial cell | 1.39e-27 | 3 |
tracheal epithelial cell | 1.39e-27 | 3 |
tracheoblast | 1.39e-27 | 3 |
epithelial cell of tracheobronchial tree | 1.33e-20 | 9 |
epithelial cell of lower respiratory tract | 1.33e-20 | 9 |
respiratory epithelial cell | 1.73e-14 | 13 |
endodermal cell | 1.03e-08 | 58 |
squamous epithelial cell | 5.32e-08 | 63 |
endo-epithelial cell | 5.38e-08 | 42 |
pneumocyte | 5.93e-08 | 3 |
epithelial cell | 2.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 1.20e-12 | 15 |
lower respiratory tract | 1.20e-12 | 15 |
trachea | 2.00e-12 | 7 |
respiratory airway | 2.00e-12 | 7 |
bronchoalveolar duct junction | 2.73e-11 | 2 |
alveolar duct | 2.73e-11 | 2 |
bronchiole | 2.73e-11 | 2 |
tongue | 4.52e-08 | 3 |
gustatory system | 4.52e-08 | 3 |
future tongue | 4.52e-08 | 3 |
pulmonary alveolus epithelium | 5.93e-08 | 3 |
alveolus | 5.93e-08 | 3 |
pulmonary lobule | 5.93e-08 | 3 |
lobule | 5.93e-08 | 3 |
alveolus of lung | 5.93e-08 | 3 |
alveolar system | 5.93e-08 | 3 |
pulmonary acinus | 5.93e-08 | 3 |
alveolar sac | 5.93e-08 | 3 |
alveolar wall | 5.93e-08 | 3 |
segment of respiratory tract | 3.57e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.44e-23 | 14 |
cystadenocarcinoma | 4.22e-21 | 1 |
mucinous cystadenocarcinoma | 4.22e-21 | 1 |
islet cell tumor | 9.43e-21 | 1 |
endocrine pancreas cancer | 9.43e-21 | 1 |
pancreatic endocrine carcinoma | 9.43e-21 | 1 |
lung adenocarcinoma | 2.73e-11 | 2 |
carcinoma | 6.29e-09 | 106 |