FFCP PHASE1:Hg19::chr10:90699296..90699439,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-157bp_to_AK127229_5end | |association_with_transcript=-157bp_to_AK127229_5end | ||
|cluster_id=chr10:90699296..90699439,- | |||
|coexpression_cluster_id=C508 | |||
|description=CAGE_peak_1_at_AK127229_5end | |description=CAGE_peak_1_at_AK127229_5end | ||
|id=chr10:90699296..90699439,- | |id=chr10:90699296..90699439,- | ||
|ontology_enrichment_celltype=CL:0000055!2.61e-21!180;CL:0000187!2.65e-13!54;CL:0000680!6.04e-13!57;CL:0000056!6.04e-13!57;CL:0000355!6.04e-13!57;CL:0000393!1.11e-11!60;CL:0000211!1.11e-11!60;CL:0000183!2.02e-11!59;CL:0000192!3.83e-11!42;CL:0000514!3.83e-11!42;CL:0000057!6.71e-10!75;CL:0000359!2.79e-08!32 | |ontology_enrichment_celltype=CL:0000055!2.61e-21!180;CL:0000187!2.65e-13!54;CL:0000680!6.04e-13!57;CL:0000056!6.04e-13!57;CL:0000355!6.04e-13!57;CL:0000393!1.11e-11!60;CL:0000211!1.11e-11!60;CL:0000183!2.02e-11!59;CL:0000192!3.83e-11!42;CL:0000514!3.83e-11!42;CL:0000057!6.71e-10!75;CL:0000359!2.79e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.17e-07;32!CL:0000192;6.19e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.53e-09,43;CL:0000514,6.53e-09,43;CL:0000187,8.00e-09,55;CL:0000057,2.78e-08,76;CL:0000680,6.16e-08,58;CL:0000056,6.16e-08,58;CL:0000355,6.16e-08,58;CL:0000393,8.69e-08,61;CL:0000211,8.69e-08,61;CL:0000359,1.78e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;6.19e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.48e-14!63;UBERON:0001015!1.48e-14!63;UBERON:0000383!1.48e-14!63;UBERON:0001134!1.25e-13!61;UBERON:0002036!1.25e-13!61;UBERON:0003082!1.25e-13!61;UBERON:0004290!1.91e-12!70;UBERON:0000914!2.97e-11!83;UBERON:0002329!2.97e-11!83;UBERON:0003077!2.97e-11!83;UBERON:0003059!2.97e-11!83;UBERON:0007282!2.97e-11!83;UBERON:0009618!2.97e-11!83;UBERON:0007285!2.97e-11!83;UBERON:0000475!3.06e-09!365;UBERON:0000486!4.52e-09!82;UBERON:0005256!5.35e-08!143;UBERON:0004872!5.88e-08!84;UBERON:0007023!8.20e-08!115;UBERON:0007100!9.92e-08!27;UBERON:0000481!1.54e-07!347;UBERON:0002100!1.93e-07!216;UBERON:0000948!8.13e-07!24;UBERON:0005498!8.13e-07!24;UBERON:0004140!8.13e-07!24;UBERON:0009881!8.13e-07!24;UBERON:0004141!8.13e-07!24;UBERON:0003084!8.13e-07!24;UBERON:0007005!8.13e-07!24;UBERON:0004139!8.13e-07!24;UBERON:0004291!8.13e-07!24 | |ontology_enrichment_uberon=UBERON:0002385!1.48e-14!63;UBERON:0001015!1.48e-14!63;UBERON:0000383!1.48e-14!63;UBERON:0001134!1.25e-13!61;UBERON:0002036!1.25e-13!61;UBERON:0003082!1.25e-13!61;UBERON:0004290!1.91e-12!70;UBERON:0000914!2.97e-11!83;UBERON:0002329!2.97e-11!83;UBERON:0003077!2.97e-11!83;UBERON:0003059!2.97e-11!83;UBERON:0007282!2.97e-11!83;UBERON:0009618!2.97e-11!83;UBERON:0007285!2.97e-11!83;UBERON:0000475!3.06e-09!365;UBERON:0000486!4.52e-09!82;UBERON:0005256!5.35e-08!143;UBERON:0004872!5.88e-08!84;UBERON:0007023!8.20e-08!115;UBERON:0007100!9.92e-08!27;UBERON:0000481!1.54e-07!347;UBERON:0002100!1.93e-07!216;UBERON:0000948!8.13e-07!24;UBERON:0005498!8.13e-07!24;UBERON:0004140!8.13e-07!24;UBERON:0009881!8.13e-07!24;UBERON:0004141!8.13e-07!24;UBERON:0003084!8.13e-07!24;UBERON:0007005!8.13e-07!24;UBERON:0004139!8.13e-07!24;UBERON:0004291!8.13e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.85e-07;6!UBERON:0002358;3.85e-07;6!UBERON:0003684;3.85e-07;6!UBERON:0001178;3.85e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,5.51e-10,64;UBERON:0001015,5.51e-10,64;UBERON:0000383,5.51e-10,64;UBERON:0007524,1.84e-09,73;UBERON:0001134,5.69e-09,62;UBERON:0002036,5.69e-09,62;UBERON:0003082,5.69e-09,62;UBERON:0003077,7.06e-09,72;UBERON:0007285,7.06e-09,72;UBERON:0002329,1.44e-08,71;UBERON:0003059,1.44e-08,71;UBERON:0007282,1.44e-08,71;UBERON:0004290,1.44e-08,71;UBERON:0009618,1.44e-08,71;UBERON:0003104,1.83e-08,160;UBERON:0009142,1.83e-08,160;UBERON:0005256,1.94e-08,122;UBERON:0007503,1.74e-07,78;UBERON:0003688,5.62e-07,6;UBERON:0002358,5.62e-07,6;UBERON:0003684,5.62e-07,6;UBERON:0001178,5.62e-07,6;UBERON:0007023,6.24e-07,114;UBERON:0002100,7.04e-07,199 | |||
|phase1_expression=3.08853244759946,12.203729861786,6.06103937612676,25.0183245882826,29.9463933266283,27.0424942471114,68.3909671054438,0,0.783556884599516,0.245733936501509,1.39560233594486,0,0,0,0,4.03395087871065,1.80808358407193,1.46062018077475,1.95173119516203,0.123121058076788,0.816002764977012,5.01527554364941,0.286235987131057,0.547497700291537,1.38096903554283,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0,0.130059347559878,0,0.552700035571697,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,4.87613732627923,1.34140171940727,2.9408389224012,0.361439152384566,2.00535164254356,0.579386075843295,0,0.486634870302636,1.13441780596881,4.65631734671384,1.93236528524877,3.01251873644739,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,20.8728219712034,2.5326102332916,0.132409180813219,0.860509862246441,0,11.7742296029885,19.2148192313469,8.88003174301776,0.311211035399766,0.538842688278752,0.490385709340376,0.151357427644931,0,0,0,0,0.448346041655403,0,0,0,0.204154171254893,0.245668634623536,0.206651562351531,2.37600571456411,9.1488763833066,0,2.15585442544872,0,0,0,1.75591048352335,20.5346823185343,5.55880817954408,2.38207584636044,2.51145489964407,2.98980344345994,1.48352330811693,0.300091096084402,1.44273540933814,1.03056216018252,1.67505170698431,0.168776332241266,4.77441325289873,2.01947019395292,2.57739716198438,0.969876340912871,4.61512470271599,6.14587799188606,2.03472710772585,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,1.56449532329816,4.5026865673502,1.38134921352481,1.85747171212792,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,1.2347220339942,7.3504355692771,0,0,1.18157981336281,0,0,0.343135620597051,0.109750285408626,0,0,0.185176890317059,0,1.03993478527958,0,0.231860809950154,3.52226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0.600686115687835,0.857479297891735,0,0,0,1.29271715757778,3.57656445851882,2.535908257668,14.360658295583,17.6812642749322,0.257207374262142,0,0,5.00422977803516,0,0,0,1.42156779497018,1.58390374586686,0.904318131178758,1.74306691720059,2.99918973546171,0,0,0,2.87549826589899,8.04033550838797,0,0.579125226670317,0.205476322550383,0,0,0,0,0,0,0,0,0.335032530668698,1.91381625495949,0,0,0,0,1.00034104211935,0.271265023699736,32.6514252603367,12.4900292158013,4.41566762095017,11.7141414992713,3.31040709700491,0,1.03473071292505,2.65690239414175,3.50301420229236,0.868836144680828,0,0.686286847621712,0,0,0,0,0,0.30239029332968,0.992431231275107,3.52962538562544,5.61320188866147,1.02511319404561,6.65219423786715,7.23842645146234,2.96836132889982,0.771048469013278,1.9531789784444,0.246381468041427,1.03850885836724,0.929683027679674,0,0.40101294060657,0,0.459257792658427,0.546273504020151,3.8026080338233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.9273691048295,0.54941678891006,0.165018999841176,0,0,3.21367859688319,0.870036464629098,0.616194468458578,0.15350367472613,1.10269257987624,0.322260734604821,0.435050081742686,0.511359764496605,2.40386496246191,0,0,0,0,1.39453664789186,0.62962469366128,0,0.616067160352178,0,0.869932992075073,1.66791797193528,5.15249592271168,0.372158369359667,5.37845022021834,10.1034002779627,1.02359116524534,1.28381696410176,0,1.56989728039846,1.43897966066652,3.29444435683266,1.29593642580255,0.404364963146632,4.75530963519025,0.842516912477962,0.975267478179181,1.70599442741899,2.11300293513511,2.32049849393576,0.707027159768564,0,0,2.65375590096488,2.19225442626881,0.578775534266688,1.31178950409327,7.10186319369464,10.5339989353915,5.35221644811259,0.143411352204052,1.08073945114433,8.91677628703126,0.709522128141196,0,1.97576935775941,0.379473173765715,0.699869440489966,0,0,0,0.753150406214233,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,2.63714722689409,0,0,0,0,0,0,0,0,0,0,0.211125408127993,63.5601082520912,4.97311047956066,0,0,0,19.9065336103557,0,0,0,21.0110454006669,0,0,0,0.556608588971108,0,0,0,3.62499787717397,0.1137934482855,0,0,0,0.291604613383254,1.73624994933292,0,0,0,0.110579259931225,0.591095237907095,1.97446857438575,0,0,11.5425387755696,0,0,0,0,0,2.10674464824283,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,10.9478812418636,1.50377859655677,15.8867837682743,0.593042257361244,0.370691816839509,0.208843899010911,0.067401132980677,3.21031058919516,0,0,0,0,14.2050385025781,8.46935012340647,0,1.13735843331278,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,22.0155601984958,0,0,0,0,13.4814732918903,0,5.64951851951331,0.137041924646751,0,0.126621591911757,0,0,23.9067354108075,0.19980960958213,0,0.114536596165916,0,0,0,0,0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| ||
|short_description=p1@AK127229 | |short_description=p1@AK127229 | ||
}} | }} |
Latest revision as of 16:30, 23 July 2015
Short description: | p1@AK127229 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK127229_5end |
Coexpression cluster: | C508_Adipocyte_aorta_smooth_umbilical_bladder_hepatic_penis |
Association with transcript: | -157bp_to_AK127229_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.53e-09 | 43 |
smooth muscle myoblast | 6.53e-09 | 43 |
muscle cell | 8.00e-09 | 55 |
fibroblast | 2.78e-08 | 76 |
muscle precursor cell | 6.16e-08 | 58 |
myoblast | 6.16e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.16e-08 | 58 |
electrically responsive cell | 8.69e-08 | 61 |
electrically active cell | 8.69e-08 | 61 |
vascular associated smooth muscle cell | 1.78e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 5.51e-10 | 64 |
musculature | 5.51e-10 | 64 |
musculature of body | 5.51e-10 | 64 |
dense mesenchyme tissue | 1.84e-09 | 73 |
skeletal muscle tissue | 5.69e-09 | 62 |
striated muscle tissue | 5.69e-09 | 62 |
myotome | 5.69e-09 | 62 |
paraxial mesoderm | 7.06e-09 | 72 |
presumptive paraxial mesoderm | 7.06e-09 | 72 |
somite | 1.44e-08 | 71 |
presomitic mesoderm | 1.44e-08 | 71 |
presumptive segmental plate | 1.44e-08 | 71 |
dermomyotome | 1.44e-08 | 71 |
trunk paraxial mesoderm | 1.44e-08 | 71 |
mesenchyme | 1.83e-08 | 160 |
entire embryonic mesenchyme | 1.83e-08 | 160 |
trunk mesenchyme | 1.94e-08 | 122 |
epithelial vesicle | 1.74e-07 | 78 |
omentum | 5.62e-07 | 6 |
peritoneum | 5.62e-07 | 6 |
abdominal cavity | 5.62e-07 | 6 |
visceral peritoneum | 5.62e-07 | 6 |
adult organism | 6.24e-07 | 114 |
trunk | 7.04e-07 | 199 |