FFCP PHASE1:Hg19::chr10:98474046..98474062,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:98474046..98474062,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:98474046..98474062,+ | |||
|id=chr10:98474046..98474062,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.66e-95!42;CL:0000860!2.95e-88!45;CL:0000766!1.22e-73!76;CL:0000839!6.36e-71!70;CL:0000557!7.49e-70!71;CL:0002194!1.58e-69!63;CL:0000576!1.58e-69!63;CL:0000040!1.58e-69!63;CL:0000559!1.58e-69!63;CL:0002009!3.09e-67!65;CL:0000763!3.85e-48!112;CL:0000049!3.85e-48!112;CL:0000738!3.93e-45!140;CL:0002087!1.61e-39!119;CL:0002031!1.45e-37!124;CL:0000037!1.46e-35!172;CL:0000566!1.46e-35!172;CL:0000988!2.97e-33!182;CL:0002032!1.08e-30!165;CL:0000837!1.08e-30!165;CL:0000134!1.30e-13!358;CL:0002320!3.22e-13!365;CL:0000219!7.88e-12!390;CL:0000034!1.61e-10!444;CL:0000048!3.64e-10!430;CL:0000723!6.28e-10!436;CL:0000842!6.26e-08!3;CL:0000784!1.06e-07!3;CL:0000767!1.17e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-77;33!CL:0002057;1.49e-77;33!CL:0000473;4.34e-54;39!CL:0000234;4.34e-54;39!CL:0000576;4.26e-46;48!CL:0000766;1.33e-29;69!CL:0002087;1.75e-17;104!CL:0002393;2.19e-15;6!CL:0002397;2.19e-15;6!CL:0000763;7.30e-14;100!CL:0000738;4.16e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.62e-92,42;CL:0002057,6.62e-92,42;CL:0000473,3.89e-80,48;CL:0000234,3.89e-80,48;CL:0002194,1.19e-63,59;CL:0000576,1.19e-63,59;CL:0000040,1.19e-63,59;CL:0000559,1.19e-63,59;CL:0002009,1.60e-61,61;CL:0000839,9.30e-57,66;CL:0000557,6.88e-56,67;CL:0000766,6.72e-52,72;CL:0000763,5.86e-34,108;CL:0000049,5.86e-34,108;CL:0002087,9.26e-32,115;CL:0002031,2.41e-30,120;CL:0000738,1.66e-26,136;CL:0002032,5.08e-22,161;CL:0000837,5.08e-22,161;CL:0000037,5.31e-21,168;CL:0000988,8.29e-20,177;CL:0002393,1.92e-10,9;CL:0002397,1.92e-10,9;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.55e-62;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.14e-61!80;UBERON:0001474!9.91e-57!86;UBERON:0002390!1.40e-53!102;UBERON:0003061!1.40e-53!102;UBERON:0002193!2.87e-48!112;UBERON:0004765!1.84e-47!101;UBERON:0001434!1.84e-47!101;UBERON:0002405!5.69e-41!115;UBERON:0002204!2.59e-26!167;UBERON:0003081!5.38e-22!216;UBERON:0002384!1.11e-12!375;UBERON:0000926!3.99e-07!448;UBERON:0004120!3.99e-07!448;UBERON:0006603!3.99e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.43e-49,76;UBERON:0001474,2.33e-45,82;UBERON:0004765,3.69e-41,90;UBERON:0002405,9.07e-40,93;UBERON:0002390,1.23e-37,98;UBERON:0003061,1.23e-37,98;UBERON:0001434,7.64e-37,100;UBERON:0002193,5.86e-34,108;UBERON:0002204,3.84e-21,167;UBERON:0003081,6.02e-17,203;UBERON:0000926,5.77e-10,315;UBERON:0004120,5.77e-10,315;UBERON:0006603,5.77e-10,315;UBERON:0002384,4.95e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,3.87796785972314,3.81034450193269,4.12320654360118,0,0,0.257575567634187,0,0,0.242584061187816,0.232429036905685,0.411167888021826,2.47765096716083,1.1507695692886,1.2808035326455,1.6553756092201,12.7555901872549,12.2642089880927,8.12558919566051,0.188242339542605,0.272906150057846,0.449446968890169,13.7737751566906,8.66508373105453,7.03270838378945,0,0,0,6.09439401120026,5.10646702222026,8.09668923694247,1.00499466102697,0.521482918420201,0.868755378820466,4.84319602106695,8.10210799172642,6.0127853613768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:98474046..98474062,+ | |||
}} |
Latest revision as of 17:10, 23 July 2015
Short description: | p@chr10:98474046..98474062, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:98474046..98474062, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.62e-92 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.62e-92 | 42 |
defensive cell | 3.89e-80 | 48 |
phagocyte | 3.89e-80 | 48 |
monopoietic cell | 1.19e-63 | 59 |
monocyte | 1.19e-63 | 59 |
monoblast | 1.19e-63 | 59 |
promonocyte | 1.19e-63 | 59 |
macrophage dendritic cell progenitor | 1.60e-61 | 61 |
myeloid lineage restricted progenitor cell | 9.30e-57 | 66 |
granulocyte monocyte progenitor cell | 6.88e-56 | 67 |
myeloid leukocyte | 6.72e-52 | 72 |
myeloid cell | 5.86e-34 | 108 |
common myeloid progenitor | 5.86e-34 | 108 |
nongranular leukocyte | 9.26e-32 | 115 |
hematopoietic lineage restricted progenitor cell | 2.41e-30 | 120 |
leukocyte | 1.66e-26 | 136 |
hematopoietic oligopotent progenitor cell | 5.08e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.08e-22 | 161 |
hematopoietic stem cell | 5.31e-21 | 168 |
hematopoietic cell | 8.29e-20 | 177 |
intermediate monocyte | 1.92e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.92e-10 | 9 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 2.47e-08 | 361 |
motile cell | 1.49e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.43e-49 | 76 |
bone element | 2.33e-45 | 82 |
skeletal element | 3.69e-41 | 90 |
immune system | 9.07e-40 | 93 |
hematopoietic system | 1.23e-37 | 98 |
blood island | 1.23e-37 | 98 |
skeletal system | 7.64e-37 | 100 |
hemolymphoid system | 5.86e-34 | 108 |
musculoskeletal system | 3.84e-21 | 167 |
lateral plate mesoderm | 6.02e-17 | 203 |
mesoderm | 5.77e-10 | 315 |
mesoderm-derived structure | 5.77e-10 | 315 |
presumptive mesoderm | 5.77e-10 | 315 |
connective tissue | 4.95e-08 | 371 |