FFCP PHASE1:Hg19::chr11:11140283..11140298,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:11140283..11140298,+ | |||
|coexpression_cluster_id=C104 | |||
|description=CAGE_peak_at_chr11:11140283..11140298,+ | |||
|id=chr11:11140283..11140298,+ | |||
|ontology_enrichment_celltype=CL:0002274!6.58e-30!5;CL:0000457!6.58e-30!5;CL:0002191!6.58e-30!5;CL:0000097!6.58e-30!5;CL:0000831!6.58e-30!5;CL:0002028!6.58e-30!5;CL:0000163!1.59e-16!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.92e-110;5!CL:0000163;2.13e-61;9!CL:0000151;2.39e-14;36!CL:0000815;3.06e-12;2!CL:0000792;3.06e-12;2!CL:0002677;3.06e-12;2!CL:0000898;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.92e-110,5;CL:0002028,4.92e-110,5;CL:0000163,2.13e-61,9;CL:0000151,1.28e-15,36;CL:0000815,3.62e-12,2;CL:0000792,3.62e-12,2;CL:0002677,3.62e-12,2;CL:0000898,1.51e-08,3;CL:0000839,1.81e-08,66;CL:0000557,2.40e-08,67;CL:0000766,8.81e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0006242;4.59e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-20!115;UBERON:0002106!6.04e-08!3;UBERON:0004854!6.04e-08!3;UBERON:0009034!6.04e-08!3;UBERON:0002095!6.04e-08!3;UBERON:0004782!6.04e-08!3;UBERON:0003281!6.04e-08!3;UBERON:0009664!6.04e-08!3;UBERON:0002296!6.04e-08!3;UBERON:0005602!6.04e-08!3;UBERON:0001179!6.04e-08!3;UBERON:0006293!6.04e-08!3;UBERON:0004177!2.39e-07!7;UBERON:0002171!3.57e-07!1;UBERON:0006518!3.57e-07!1;UBERON:0008949!3.57e-07!1;UBERON:0000101!3.57e-07!1;UBERON:0002167!3.57e-07!1;UBERON:0006834!3.78e-07!1;UBERON:0000989!4.01e-07!1;UBERON:0008811!4.01e-07!1;UBERON:0006258!4.01e-07!1;UBERON:0005876!4.01e-07!1;UBERON:0004874!4.01e-07!1;UBERON:0001154!5.69e-07!1;UBERON:0001153!5.69e-07!1;UBERON:0002146!6.76e-07!1;UBERON:0005623!6.76e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.40e-08,3;UBERON:0006242,1.40e-08,3;UBERON:0002371,2.21e-07,76;UBERON:0001474,7.47e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30368906653436,0,1.94826728407911,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91195885475132,17.521638368632,12.4396869324463,35.8858684008234,7.06957627187728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0.611207220914332,0,0,0,0 | |||
|short_description=p@chr11:11140283..11140298,+ | |||
}} |
Latest revision as of 18:05, 23 July 2015
Short description: | p@chr11:11140283..11140298, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:11140283..11140298, + |
Coexpression cluster: | C104_Mast_Basophils_immature_CD14_CD34_eye_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.92e-110 | 5 |
basophil mast progenitor cell | 4.92e-110 | 5 |
endocrine cell | 2.13e-61 | 9 |
secretory cell | 1.28e-15 | 36 |
regulatory T cell | 3.62e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.62e-12 | 2 |
naive regulatory T cell | 3.62e-12 | 2 |
naive T cell | 1.51e-08 | 3 |
myeloid lineage restricted progenitor cell | 1.81e-08 | 66 |
granulocyte monocyte progenitor cell | 2.40e-08 | 67 |
myeloid leukocyte | 8.81e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 1.40e-08 | 3 |
gall bladder primordium | 1.40e-08 | 3 |
bone marrow | 2.21e-07 | 76 |
bone element | 7.47e-07 | 82 |