FFCP PHASE1:Hg19::chr11:118185161..118185183,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:118185161..118185183,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_at_chr11:118185161..118185183,+ | |description=CAGE_peak_at_chr11:118185161..118185183,+ | ||
|id=chr11:118185161..118185183,+ | |id=chr11:118185161..118185183,+ | ||
|ontology_enrichment_celltype=CL:0000791;6.05e-26;18!CL:0000789;6.05e-26;18!CL:0002419;6.05e-26;18!CL:0000084;9.60e-23;25!CL:0000624;5.53e-17;6!CL:0000625;2.04e-13;11!CL:0000898;3.66e-09;3!CL:0000623;6.46e-09;3!CL:0000542;6.82e-08;53!CL:0000895;2.65e-07;1 | |ontology_enrichment_celltype=CL:0000084!3.17e-34!25;CL:0000827!3.17e-34!25;CL:0000791!1.13e-29!18;CL:0000789!1.13e-29!18;CL:0002420!1.13e-29!18;CL:0002419!1.13e-29!18;CL:0000790!1.13e-29!18;CL:0000838!9.25e-22!52;CL:0000542!3.09e-21!53;CL:0000051!3.09e-21!53;CL:0000624!2.60e-18!6;CL:0000738!1.20e-13!140;CL:0002087!1.16e-12!119;CL:0000625!2.32e-12!11;CL:0000898!8.45e-10!3;CL:0000623!1.04e-09!3;CL:0000825!1.04e-09!3;CL:0000037!1.25e-09!172;CL:0000566!1.25e-09!172;CL:0000842!3.94e-09!3;CL:0002031!5.82e-09!124;CL:0000988!1.12e-08!182;CL:0002032!3.39e-07!165;CL:0000837!3.39e-07!165;CL:0000815!3.77e-07!2;CL:0000792!3.77e-07!2;CL:0002677!3.77e-07!2;CL:0000224!6.07e-07!4;CL:0000893!8.40e-07!2;CL:0002489!8.40e-07!2;CL:0000809!8.40e-07!2;CL:0000808!8.40e-07!2;CL:0000894!8.40e-07!2;CL:0000806!8.40e-07!2;CL:0000807!8.40e-07!2;CL:0000805!8.40e-07!2;CL:0002425!8.40e-07!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;6.05e-26;18!CL:0000789;6.05e-26;18!CL:0002419;6.05e-26;18!CL:0000084;9.60e-23;25!CL:0000624;5.53e-17;6!CL:0000625;2.04e-13;11!CL:0000898;3.66e-09;3!CL:0000623;6.46e-09;3!CL:0000542;6.82e-08;53!CL:0000895;2.65e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.21e-26,18;CL:0000789,8.21e-26,18;CL:0002420,8.21e-26,18;CL:0002419,8.21e-26,18;CL:0000790,8.21e-26,18;CL:0000084,1.28e-22,25;CL:0000827,1.28e-22,25;CL:0000624,7.71e-17,6;CL:0000838,1.78e-14,52;CL:0000542,3.68e-14,53;CL:0000051,3.68e-14,53;CL:0000625,2.15e-13,11;CL:0000898,5.51e-09,3;CL:0000623,6.74e-09,3;CL:0000825,6.74e-09,3;CL:0000810,4.34e-07,1;CL:0000895,4.34e-07,1;CL:0002436,4.34e-07,1;CL:0002427,4.34e-07,1;CL:0002428,4.34e-07,1;CL:0002429,4.34e-07,1;CL:0002433,4.34e-07,1;CL:0002431,4.34e-07,1;CL:0002432,4.34e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;6.05e-26;18!CL:0000051;6.82e-08;53!CL:0002427;2.65e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.95e-17!15;UBERON:0000179!1.95e-17!15;UBERON:0000463!1.95e-17!15;UBERON:0004177!2.43e-14!7;UBERON:0002370!2.09e-12!4;UBERON:0005058!2.09e-12!4;UBERON:0009113!2.09e-12!4;UBERON:0003295!2.09e-12!4;UBERON:0005562!2.09e-12!4;UBERON:0003351!2.90e-08!6;UBERON:0003408!3.36e-07!10;UBERON:0001042!3.96e-07!10;UBERON:0009145!3.96e-07!10 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.49e-07,4;UBERON:0005058,4.49e-07,4;UBERON:0009113,4.49e-07,4;UBERON:0003295,4.49e-07,4;UBERON:0005562,4.49e-07,4 | |||
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| ||
|short_description=p@chr11:118185161..118185183,+ | |short_description=p@chr11:118185161..118185183,+ | ||
}} | }} |
Latest revision as of 18:45, 23 July 2015
Short description: | p@chr11:118185161..118185183, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118185161..118185183, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.21e-26 | 18 |
alpha-beta T cell | 8.21e-26 | 18 |
immature T cell | 8.21e-26 | 18 |
mature T cell | 8.21e-26 | 18 |
immature alpha-beta T cell | 8.21e-26 | 18 |
T cell | 1.28e-22 | 25 |
pro-T cell | 1.28e-22 | 25 |
CD4-positive, alpha-beta T cell | 7.71e-17 | 6 |
lymphoid lineage restricted progenitor cell | 1.78e-14 | 52 |
lymphocyte | 3.68e-14 | 53 |
common lymphoid progenitor | 3.68e-14 | 53 |
CD8-positive, alpha-beta T cell | 2.15e-13 | 11 |
naive T cell | 5.51e-09 | 3 |
natural killer cell | 6.74e-09 | 3 |
pro-NK cell | 6.74e-09 | 3 |
CD4-positive, alpha-beta thymocyte | 4.34e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 4.34e-07 | 1 |
mature CD4 single-positive thymocyte | 4.34e-07 | 1 |
resting double-positive thymocyte | 4.34e-07 | 1 |
double-positive blast | 4.34e-07 | 1 |
CD69-positive double-positive thymocyte | 4.34e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 4.34e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 4.34e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.49e-07 | 4 |
hemolymphoid system gland | 4.49e-07 | 4 |
thymic region | 4.49e-07 | 4 |
pharyngeal gland | 4.49e-07 | 4 |
thymus primordium | 4.49e-07 | 4 |