FFCP PHASE1:Hg19::chr11:118186284..118186306,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:118186284..118186306,+ | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_at_chr11:118186284..118186306,+ | |description=CAGE_peak_at_chr11:118186284..118186306,+ | ||
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|ontology_enrichment_celltype=CL:0000084!3.44e-26!25;CL:0000827!3.44e-26!25;CL:0000791!2.32e-21!18;CL:0000789!2.32e-21!18;CL:0002420!2.32e-21!18;CL:0002419!2.32e-21!18;CL:0000790!2.32e-21!18;CL:0000838!1.20e-15!52;CL:0000542!2.93e-15!53;CL:0000051!2.93e-15!53;CL:0000625!1.44e-12!11;CL:0000623!4.38e-10!3;CL:0000825!4.38e-10!3;CL:0000842!1.04e-09!3;CL:0000624!3.31e-08!6;CL:0002087!6.68e-08!119;CL:0000224!2.28e-07!4;CL:0000738!2.40e-07!140 | |ontology_enrichment_celltype=CL:0000084!3.44e-26!25;CL:0000827!3.44e-26!25;CL:0000791!2.32e-21!18;CL:0000789!2.32e-21!18;CL:0002420!2.32e-21!18;CL:0002419!2.32e-21!18;CL:0000790!2.32e-21!18;CL:0000838!1.20e-15!52;CL:0000542!2.93e-15!53;CL:0000051!2.93e-15!53;CL:0000625!1.44e-12!11;CL:0000623!4.38e-10!3;CL:0000825!4.38e-10!3;CL:0000842!1.04e-09!3;CL:0000624!3.31e-08!6;CL:0002087!6.68e-08!119;CL:0000224!2.28e-07!4;CL:0000738!2.40e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.22e-20;3!CL:0000791;3.25e-09;18!CL:0000789;3.25e-09;18!CL:0002419;3.25e-09;18!CL:0000084;3.51e-09;25 | |ontology_enrichment_celltype_v019=CL:0000623;2.22e-20;3!CL:0000791;3.25e-09;18!CL:0000789;3.25e-09;18!CL:0002419;3.25e-09;18!CL:0000084;3.51e-09;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.60e-20,3;CL:0000825,1.60e-20,3;CL:0000791,3.37e-09,18;CL:0000789,3.37e-09,18;CL:0002420,3.37e-09,18;CL:0002419,3.37e-09,18;CL:0000790,3.37e-09,18;CL:0000084,4.15e-09,25;CL:0000827,4.15e-09,25;CL:0000838,6.13e-09,52;CL:0000542,9.60e-09,53;CL:0000051,9.60e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000790;3.25e-09;18 | |ontology_enrichment_development_v019=CL:0000790;3.25e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.42e-11!15;UBERON:0000179!3.42e-11!15;UBERON:0000463!3.42e-11!15;UBERON:0002370!1.15e-07!4;UBERON:0005058!1.15e-07!4;UBERON:0009113!1.15e-07!4;UBERON:0003295!1.15e-07!4;UBERON:0005562!1.15e-07!4;UBERON:0004177!3.18e-07!7;UBERON:0007023!7.58e-07!115 | |ontology_enrichment_uberon=UBERON:0000178!3.42e-11!15;UBERON:0000179!3.42e-11!15;UBERON:0000463!3.42e-11!15;UBERON:0002370!1.15e-07!4;UBERON:0005058!1.15e-07!4;UBERON:0009113!1.15e-07!4;UBERON:0003295!1.15e-07!4;UBERON:0005562!1.15e-07!4;UBERON:0004177!3.18e-07!7;UBERON:0007023!7.58e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.70e-15;2!UBERON:0005058;9.70e-15;2!UBERON:0009113;9.70e-15;2!UBERON:0000029;6.18e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0002370;9.70e-15;2!UBERON:0005058;9.70e-15;2!UBERON:0009113;9.70e-15;2!UBERON:0000029;6.18e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.34e-08,1;UBERON:0002370,6.00e-08,4;UBERON:0005058,6.00e-08,4;UBERON:0009113,6.00e-08,4;UBERON:0003295,6.00e-08,4;UBERON:0005562,6.00e-08,4 | |||
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| ||
|short_description=p@chr11:118186284..118186306,+ | |short_description=p@chr11:118186284..118186306,+ | ||
}} | }} |
Latest revision as of 18:45, 23 July 2015
Short description: | p@chr11:118186284..118186306, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118186284..118186306, + |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.60e-20 | 3 |
pro-NK cell | 1.60e-20 | 3 |
mature alpha-beta T cell | 3.37e-09 | 18 |
alpha-beta T cell | 3.37e-09 | 18 |
immature T cell | 3.37e-09 | 18 |
mature T cell | 3.37e-09 | 18 |
immature alpha-beta T cell | 3.37e-09 | 18 |
T cell | 4.15e-09 | 25 |
pro-T cell | 4.15e-09 | 25 |
lymphoid lineage restricted progenitor cell | 6.13e-09 | 52 |
lymphocyte | 9.60e-09 | 53 |
common lymphoid progenitor | 9.60e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.34e-08 | 1 |
thymus | 6.00e-08 | 4 |
hemolymphoid system gland | 6.00e-08 | 4 |
thymic region | 6.00e-08 | 4 |
pharyngeal gland | 6.00e-08 | 4 |
thymus primordium | 6.00e-08 | 4 |