FFCP PHASE1:Hg19::chr11:19218255..19218267,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-54bp_to_ENST00000527978_5end | |association_with_transcript=-54bp_to_ENST00000527978_5end | ||
|cluster_id=chr11:19218255..19218267,+ | |||
|coexpression_cluster_id=C131 | |coexpression_cluster_id=C131 | ||
|description=CAGE_peak_1_at_ENST00000527978_5end | |description=CAGE_peak_1_at_ENST00000527978_5end | ||
|id=chr11:19218255..19218267,+ | |id=chr11:19218255..19218267,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.97e-34;1!UBERON:0004872;9.48e-20;7!UBERON:0006965;9.86e-18;2!UBERON:0008947;4.72e-11;29!UBERON:0005062;1.50e-09;4!UBERON:0007284;1.50e-09;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!2.66e-18!2;UBERON:0000341!1.23e-17!2;UBERON:0003978!2.54e-12!3;UBERON:0009751!2.54e-12!3;UBERON:0000946!2.54e-12!3;UBERON:0002523!2.54e-12!3;UBERON:0005983!2.54e-12!3;UBERON:0002165!2.54e-12!3;UBERON:0002062!2.54e-12!3;UBERON:0007280!2.54e-12!3;UBERON:0002135!4.87e-10!1;UBERON:0002171!6.88e-10!1;UBERON:0006518!6.88e-10!1;UBERON:0008949!6.88e-10!1;UBERON:0000101!6.88e-10!1;UBERON:0002167!6.88e-10!1;UBERON:0001301!8.17e-10!1;UBERON:0002146!1.06e-09!1;UBERON:0005623!1.06e-09!1;UBERON:0000997!2.46e-09!1;UBERON:0005056!2.46e-09!1;UBERON:0007023!4.93e-07!115 | |ontology_enrichment_uberon=UBERON:0003127!2.66e-18!2;UBERON:0000341!1.23e-17!2;UBERON:0003978!2.54e-12!3;UBERON:0009751!2.54e-12!3;UBERON:0000946!2.54e-12!3;UBERON:0002523!2.54e-12!3;UBERON:0005983!2.54e-12!3;UBERON:0002165!2.54e-12!3;UBERON:0002062!2.54e-12!3;UBERON:0007280!2.54e-12!3;UBERON:0002135!4.87e-10!1;UBERON:0002171!6.88e-10!1;UBERON:0006518!6.88e-10!1;UBERON:0008949!6.88e-10!1;UBERON:0000101!6.88e-10!1;UBERON:0002167!6.88e-10!1;UBERON:0001301!8.17e-10!1;UBERON:0002146!1.06e-09!1;UBERON:0005623!1.06e-09!1;UBERON:0000997!2.46e-09!1;UBERON:0005056!2.46e-09!1;UBERON:0007023!4.93e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002135;5.97e-34;1!UBERON:0003127;6.48e-18;2!UBERON:0002133;9.86e-18;2!UBERON:0003978;2.74e-12;3!UBERON:0000946;2.74e-12;3!UBERON:0005178;1.65e-07;34!UBERON:0002224;1.65e-07;34!UBERON:0002048;5.17e-07;22!UBERON:0000117;5.17e-07;22!UBERON:0000171;5.17e-07;22!UBERON:0000170;5.17e-07;22!UBERON:0000948;5.74e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,5.05e-34,1;UBERON:0003127,6.48e-18,2;UBERON:0002133,9.07e-18,2;UBERON:0003978,2.59e-12,3;UBERON:0009751,2.59e-12,3;UBERON:0000946,2.59e-12,3;UBERON:0002523,2.59e-12,3;UBERON:0005983,2.59e-12,3;UBERON:0002165,2.59e-12,3;UBERON:0002062,2.59e-12,3;UBERON:0007280,2.59e-12,3;UBERON:0005178,1.62e-09,34;UBERON:0002224,1.62e-09,34;UBERON:0005181,2.89e-09,35;UBERON:0008947,1.37e-08,38;UBERON:0003258,1.37e-08,38;UBERON:0005157,4.69e-07,47;UBERON:0002048,5.40e-07,22;UBERON:0000117,5.40e-07,22;UBERON:0000171,5.40e-07,22;UBERON:0000170,5.40e-07,22;UBERON:0005597,5.40e-07,22;UBERON:0000118,5.40e-07,22 | |||
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|short_description=p1@ENST00000527978 | |short_description=p1@ENST00000527978 | ||
}} | }} |
Latest revision as of 20:47, 23 July 2015
Short description: | p1@ENST00000527978 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000527978_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | -54bp_to_ENST00000527978_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mitral valve | 5.05e-34 | 1 |
open tracheal system trachea | 6.48e-18 | 2 |
atrioventricular valve | 9.07e-18 | 2 |
valve | 2.59e-12 | 3 |
cardiac mesenchyme | 2.59e-12 | 3 |
cardial valve | 2.59e-12 | 3 |
tunica intima | 2.59e-12 | 3 |
heart layer | 2.59e-12 | 3 |
endocardium | 2.59e-12 | 3 |
endocardial cushion | 2.59e-12 | 3 |
presumptive endocardium | 2.59e-12 | 3 |
thoracic cavity element | 1.62e-09 | 34 |
thoracic cavity | 1.62e-09 | 34 |
thoracic segment organ | 2.89e-09 | 35 |
respiratory primordium | 1.37e-08 | 38 |
endoderm of foregut | 1.37e-08 | 38 |
epithelial fold | 4.69e-07 | 47 |
lung | 5.40e-07 | 22 |
respiratory tube | 5.40e-07 | 22 |
respiration organ | 5.40e-07 | 22 |
pair of lungs | 5.40e-07 | 22 |
lung primordium | 5.40e-07 | 22 |
lung bud | 5.40e-07 | 22 |