FFCP PHASE1:Hg19::chr11:35334844..35334858,-: Difference between revisions
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|id=chr11:35334844..35334858,-
|short_description=p@chr11:35334844..35334858,-
|description=CAGE_peak_at_chr11:35334844..35334858,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:35334844..35334858,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr11:35334844..35334858,- | |||
|id=chr11:35334844..35334858,- | |||
|ontology_enrichment_celltype=CL:0002057!3.67e-58!42;CL:0000860!5.06e-54!45;CL:0000766!4.39e-44!76;CL:0002194!7.83e-41!63;CL:0000576!7.83e-41!63;CL:0000040!7.83e-41!63;CL:0000559!7.83e-41!63;CL:0002009!1.81e-39!65;CL:0000839!2.13e-36!70;CL:0000738!2.21e-36!140;CL:0000557!7.78e-36!71;CL:0002087!6.88e-32!119;CL:0000037!1.00e-28!172;CL:0000566!1.00e-28!172;CL:0000763!1.38e-28!112;CL:0000049!1.38e-28!112;CL:0000988!7.04e-27!182;CL:0002031!4.08e-23!124;CL:0002032!1.18e-21!165;CL:0000837!1.18e-21!165;CL:0000842!5.35e-20!3;CL:0000767!1.24e-19!3;CL:0000224!3.80e-15!4;CL:0000134!3.83e-11!358;CL:0002320!7.92e-11!365;CL:0000080!2.84e-10!6;CL:0000219!1.03e-09!390;CL:0000784!1.64e-09!3;CL:0000623!1.86e-09!3;CL:0000825!1.86e-09!3;CL:0000034!7.73e-09!444;CL:0000048!2.24e-08!430;CL:0000723!3.47e-08!436;CL:0000094!1.09e-07!8;CL:0002393!2.19e-07!9;CL:0002397!2.19e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.02e-22;33!CL:0002057;4.02e-22;33!CL:0002393;7.04e-21;6!CL:0002397;7.04e-21;6!CL:0000576;7.42e-19;48!CL:0000226;1.77e-18;3!CL:0000842;1.77e-18;3!CL:0000473;1.02e-16;39!CL:0000234;1.02e-16;39!CL:0000766;1.43e-14;69!CL:0002087;1.11e-10;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.07e-37,42;CL:0002057,4.07e-37,42;CL:0000473,2.42e-32,48;CL:0000234,2.42e-32,48;CL:0002194,1.53e-30,59;CL:0000576,1.53e-30,59;CL:0000040,1.53e-30,59;CL:0000559,1.53e-30,59;CL:0002009,1.61e-29,61;CL:0000839,3.18e-27,66;CL:0000557,8.34e-27,67;CL:0000766,6.96e-25,72;CL:0002087,6.05e-21,115;CL:0000226,1.94e-18,3;CL:0000842,1.94e-18,3;CL:0000738,1.65e-17,136;CL:0000763,3.12e-16,108;CL:0000049,3.12e-16,108;CL:0002031,1.74e-14,120;CL:0002393,3.79e-14,9;CL:0002397,3.79e-14,9;CL:0000037,6.61e-14,168;CL:0000988,4.00e-13,177;CL:0002032,1.85e-10,161;CL:0000837,1.85e-10,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.63e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.83e-32!102;UBERON:0003061!6.83e-32!102;UBERON:0002371!2.16e-31!80;UBERON:0001474!6.13e-29!86;UBERON:0002193!1.16e-28!112;UBERON:0004765!4.56e-24!101;UBERON:0001434!4.56e-24!101;UBERON:0002405!1.18e-20!115;UBERON:0002204!5.88e-13!167;UBERON:0003081!1.09e-12!216;UBERON:0002384!2.14e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.75e-25,98;UBERON:0003061,8.75e-25,98;UBERON:0002371,1.59e-23,76;UBERON:0002193,2.21e-22,108;UBERON:0001474,9.87e-22,82;UBERON:0004765,1.04e-19,90;UBERON:0002405,4.90e-19,93;UBERON:0001434,1.26e-17,100;UBERON:0003081,3.01e-11,203;UBERON:0002204,4.94e-10,167 | |||
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|short_description=p@chr11:35334844..35334858,- | |||
}} | }} |
Latest revision as of 21:57, 23 July 2015
Short description: | p@chr11:35334844..35334858, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:35334844..35334858, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.07e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.07e-37 | 42 |
defensive cell | 2.42e-32 | 48 |
phagocyte | 2.42e-32 | 48 |
monopoietic cell | 1.53e-30 | 59 |
monocyte | 1.53e-30 | 59 |
monoblast | 1.53e-30 | 59 |
promonocyte | 1.53e-30 | 59 |
macrophage dendritic cell progenitor | 1.61e-29 | 61 |
myeloid lineage restricted progenitor cell | 3.18e-27 | 66 |
granulocyte monocyte progenitor cell | 8.34e-27 | 67 |
myeloid leukocyte | 6.96e-25 | 72 |
nongranular leukocyte | 6.05e-21 | 115 |
single nucleate cell | 1.94e-18 | 3 |
mononuclear cell | 1.94e-18 | 3 |
leukocyte | 1.65e-17 | 136 |
myeloid cell | 3.12e-16 | 108 |
common myeloid progenitor | 3.12e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 1.74e-14 | 120 |
intermediate monocyte | 3.79e-14 | 9 |
CD14-positive, CD16-positive monocyte | 3.79e-14 | 9 |
hematopoietic stem cell | 6.61e-14 | 168 |
hematopoietic cell | 4.00e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.85e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-10 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.75e-25 | 98 |
blood island | 8.75e-25 | 98 |
bone marrow | 1.59e-23 | 76 |
hemolymphoid system | 2.21e-22 | 108 |
bone element | 9.87e-22 | 82 |
skeletal element | 1.04e-19 | 90 |
immune system | 4.90e-19 | 93 |
skeletal system | 1.26e-17 | 100 |
lateral plate mesoderm | 3.01e-11 | 203 |
musculoskeletal system | 4.94e-10 | 167 |