FFCP PHASE1:Hg19::chr11:46665179..46665183,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:46665179..46665183,+ | |||
|description=CAGE_peak_at_chr11:46665179..46665183,+ | |description=CAGE_peak_at_chr11:46665179..46665183,+ | ||
|id=chr11:46665179..46665183,+ | |id=chr11:46665179..46665183,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.77e-08!172;CL:0000566!2.77e-08!172;CL:0000988!8.29e-08!182;CL:0002032!8.82e-07!165;CL:0000837!8.82e-07!165 | |ontology_enrichment_celltype=CL:0000037!2.77e-08!172;CL:0000566!2.77e-08!172;CL:0000988!8.29e-08!182;CL:0002032!8.82e-07!165;CL:0000837!8.82e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.02e-18;18!CL:0000789;1.02e-18;18!CL:0002419;1.02e-18;18!CL:0000624;5.82e-15;6!CL:0000775;3.88e-14;3!CL:0000084;2.27e-13;25!CL:0000625;2.10e-08;11!CL:0000542;7.48e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.75e-19,18;CL:0000789,8.75e-19,18;CL:0002420,8.75e-19,18;CL:0002419,8.75e-19,18;CL:0000790,8.75e-19,18;CL:0000624,6.12e-15,6;CL:0000775,3.64e-14,3;CL:0000084,2.04e-13,25;CL:0000827,2.04e-13,25;CL:0000838,8.61e-11,52;CL:0000542,1.44e-10,53;CL:0000051,1.44e-10,53;CL:0000625,1.81e-08,11;CL:0000738,8.67e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;1.02e-18;18!CL:0000051;7.48e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002308!6.68e-07!9;UBERON:0000125!6.68e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;8.61e-11;1!UBERON:0002171;8.61e-11;1!UBERON:0009661;8.61e-11;1!UBERON:0006518;8.61e-11;1!UBERON:0008949;8.61e-11;1!UBERON:0002950;8.61e-11;1!UBERON:0000101;8.61e-11;1!UBERON:0001891;8.61e-11;1!UBERON:0002167;8.61e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,9.05e-11,1;UBERON:0006518,9.05e-11,1;UBERON:0008949,9.05e-11,1;UBERON:0000101,9.05e-11,1;UBERON:0002167,9.05e-11,1;UBERON:0002038,1.77e-10,1;UBERON:0009661,1.77e-10,1;UBERON:0002950,1.77e-10,1;UBERON:0001891,1.77e-10,1;UBERON:0009616,1.77e-10,1;UBERON:0010286,1.77e-10,1 | |||
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| ||
|short_description=p@chr11:46665179..46665183,+ | |short_description=p@chr11:46665179..46665183,+ | ||
}} | }} |
Latest revision as of 22:29, 23 July 2015
Short description: | p@chr11:46665179..46665183, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:46665179..46665183, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.75e-19 | 18 |
alpha-beta T cell | 8.75e-19 | 18 |
immature T cell | 8.75e-19 | 18 |
mature T cell | 8.75e-19 | 18 |
immature alpha-beta T cell | 8.75e-19 | 18 |
CD4-positive, alpha-beta T cell | 6.12e-15 | 6 |
neutrophil | 3.64e-14 | 3 |
T cell | 2.04e-13 | 25 |
pro-T cell | 2.04e-13 | 25 |
lymphoid lineage restricted progenitor cell | 8.61e-11 | 52 |
lymphocyte | 1.44e-10 | 53 |
common lymphoid progenitor | 1.44e-10 | 53 |
CD8-positive, alpha-beta T cell | 1.81e-08 | 11 |
leukocyte | 8.67e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 9.05e-11 | 1 |
right lung lobe | 9.05e-11 | 1 |
lower lobe of lung | 9.05e-11 | 1 |
lobe of lung | 9.05e-11 | 1 |
right lung | 9.05e-11 | 1 |
substantia nigra | 1.77e-10 | 1 |
midbrain nucleus | 1.77e-10 | 1 |
regional part of midbrain | 1.77e-10 | 1 |
midbrain | 1.77e-10 | 1 |
presumptive midbrain | 1.77e-10 | 1 |
midbrain neural tube | 1.77e-10 | 1 |