FFCP PHASE1:Hg19::chr11:47396114..47396124,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:47396114..47396124,- | |||
|coexpression_cluster_id=C2069 | |||
|description=CAGE_peak_at_chr11:47396114..47396124,- | |description=CAGE_peak_at_chr11:47396114..47396124,- | ||
|id=chr11:47396114..47396124,- | |id=chr11:47396114..47396124,- | ||
|ontology_enrichment_celltype=CL:0002057!3.93e-92!42;CL:0000860!1.53e-85!45;CL:0000766!8.65e-71!76;CL:0002009!1.31e-64!65;CL:0000557!1.23e-58!71;CL:0002194!3.83e-58!63;CL:0000576!3.83e-58!63;CL:0000040!3.83e-58!63;CL:0000559!3.83e-58!63;CL:0000763!9.61e-55!112;CL:0000049!9.61e-55!112;CL:0000839!9.63e-52!70;CL:0000738!3.63e-50!140;CL:0000037!1.42e-41!172;CL:0000566!1.42e-41!172;CL:0000988!7.31e-39!182;CL:0002087!4.94e-37!119;CL:0002032!8.14e-37!165;CL:0000837!8.14e-37!165;CL:0002031!6.16e-33!124;CL:0000094!3.00e-21!8;CL:0000134!8.69e-16!358;CL:0002320!2.52e-15!365;CL:0000081!2.77e-15!11;CL:0000767!3.42e-15!3;CL:0000842!1.76e-14!3;CL:0000219!1.07e-13!390;CL:0000048!9.59e-12!430;CL:0000723!1.82e-11!436;CL:0000034!4.15e-11!444;CL:0000224!5.52e-11!4;CL:0001014!2.42e-10!2;CL:0001016!2.42e-10!2;CL:0000080!1.82e-07!6;CL:0000775!3.23e-07!3 | |ontology_enrichment_celltype=CL:0002057!3.93e-92!42;CL:0000860!1.53e-85!45;CL:0000766!8.65e-71!76;CL:0002009!1.31e-64!65;CL:0000557!1.23e-58!71;CL:0002194!3.83e-58!63;CL:0000576!3.83e-58!63;CL:0000040!3.83e-58!63;CL:0000559!3.83e-58!63;CL:0000763!9.61e-55!112;CL:0000049!9.61e-55!112;CL:0000839!9.63e-52!70;CL:0000738!3.63e-50!140;CL:0000037!1.42e-41!172;CL:0000566!1.42e-41!172;CL:0000988!7.31e-39!182;CL:0002087!4.94e-37!119;CL:0002032!8.14e-37!165;CL:0000837!8.14e-37!165;CL:0002031!6.16e-33!124;CL:0000094!3.00e-21!8;CL:0000134!8.69e-16!358;CL:0002320!2.52e-15!365;CL:0000081!2.77e-15!11;CL:0000767!3.42e-15!3;CL:0000842!1.76e-14!3;CL:0000219!1.07e-13!390;CL:0000048!9.59e-12!430;CL:0000723!1.82e-11!436;CL:0000034!4.15e-11!444;CL:0000224!5.52e-11!4;CL:0001014!2.42e-10!2;CL:0001016!2.42e-10!2;CL:0000080!1.82e-07!6;CL:0000775!3.23e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.26e-31;33!CL:0002057;3.26e-31;33!CL:0000094;1.04e-29;8!CL:0000767;1.41e-28;3!CL:0000766;1.22e-25;69!CL:0000473;1.47e-23;39!CL:0000234;1.47e-23;39!CL:0000576;2.36e-22;48!CL:0000081;1.31e-21;11!CL:0002393;2.71e-15;6!CL:0002397;2.71e-15;6!CL:0000763;4.37e-10;100!CL:0002087;2.75e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.67e-44,72;CL:0000860,1.08e-41,42;CL:0002057,1.08e-41,42;CL:0000473,3.20e-36,48;CL:0000234,3.20e-36,48;CL:0000763,5.33e-32,108;CL:0000049,5.33e-32,108;CL:0002009,7.51e-32,61;CL:0000094,5.24e-30,8;CL:0000767,4.71e-29,3;CL:0000557,7.71e-29,67;CL:0002194,1.48e-28,59;CL:0000576,1.48e-28,59;CL:0000040,1.48e-28,59;CL:0000559,1.48e-28,59;CL:0000738,9.17e-28,136;CL:0000839,2.39e-25,66;CL:0000037,5.58e-22,168;CL:0000081,7.98e-22,11;CL:0000988,1.00e-20,177;CL:0002032,1.26e-20,161;CL:0000837,1.26e-20,161;CL:0002087,5.88e-16,115;CL:0002031,3.53e-15,120;CL:0002393,2.09e-10,9;CL:0002397,2.09e-10,9;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000219,7.44e-08,386;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-34;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.47e-51!80;UBERON:0002390!1.67e-47!102;UBERON:0003061!1.67e-47!102;UBERON:0001474!2.64e-47!86;UBERON:0002193!1.22e-42!112;UBERON:0004765!2.64e-39!101;UBERON:0001434!2.64e-39!101;UBERON:0002405!1.05e-33!115;UBERON:0002204!4.54e-21!167;UBERON:0003081!1.36e-18!216;UBERON:0002384!1.07e-14!375 | |ontology_enrichment_uberon=UBERON:0002371!2.47e-51!80;UBERON:0002390!1.67e-47!102;UBERON:0003061!1.67e-47!102;UBERON:0001474!2.64e-47!86;UBERON:0002193!1.22e-42!112;UBERON:0004765!2.64e-39!101;UBERON:0001434!2.64e-39!101;UBERON:0002405!1.05e-33!115;UBERON:0002204!4.54e-21!167;UBERON:0003081!1.36e-18!216;UBERON:0002384!1.07e-14!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.36e-25,76;UBERON:0001474,3.28e-23,82;UBERON:0002390,5.90e-22,98;UBERON:0003061,5.90e-22,98;UBERON:0004765,5.77e-21,90;UBERON:0002405,3.20e-20,93;UBERON:0002193,1.03e-19,108;UBERON:0001434,1.18e-18,100;UBERON:0002204,2.98e-10,167;UBERON:0003081,2.46e-09,203;UBERON:0002384,2.34e-08,371 | |||
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|short_description=p@chr11:47396114..47396124,- | |short_description=p@chr11:47396114..47396124,- | ||
}} | }} |
Latest revision as of 22:36, 23 July 2015
Short description: | p@chr11:47396114..47396124, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:47396114..47396124, - |
Coexpression cluster: | C2069_CD14_Neutrophils_Peripheral_Eosinophils_Basophils_immature_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.67e-44 | 72 |
classical monocyte | 1.08e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-41 | 42 |
defensive cell | 3.20e-36 | 48 |
phagocyte | 3.20e-36 | 48 |
myeloid cell | 5.33e-32 | 108 |
common myeloid progenitor | 5.33e-32 | 108 |
macrophage dendritic cell progenitor | 7.51e-32 | 61 |
granulocyte | 5.24e-30 | 8 |
basophil | 4.71e-29 | 3 |
granulocyte monocyte progenitor cell | 7.71e-29 | 67 |
monopoietic cell | 1.48e-28 | 59 |
monocyte | 1.48e-28 | 59 |
monoblast | 1.48e-28 | 59 |
promonocyte | 1.48e-28 | 59 |
leukocyte | 9.17e-28 | 136 |
myeloid lineage restricted progenitor cell | 2.39e-25 | 66 |
hematopoietic stem cell | 5.58e-22 | 168 |
blood cell | 7.98e-22 | 11 |
hematopoietic cell | 1.00e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.26e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.26e-20 | 161 |
nongranular leukocyte | 5.88e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 3.53e-15 | 120 |
intermediate monocyte | 2.09e-10 | 9 |
CD14-positive, CD16-positive monocyte | 2.09e-10 | 9 |
mesenchymal cell | 6.59e-09 | 354 |
connective tissue cell | 1.13e-08 | 361 |
motile cell | 7.44e-08 | 386 |
multi fate stem cell | 7.57e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.36e-25 | 76 |
bone element | 3.28e-23 | 82 |
hematopoietic system | 5.90e-22 | 98 |
blood island | 5.90e-22 | 98 |
skeletal element | 5.77e-21 | 90 |
immune system | 3.20e-20 | 93 |
hemolymphoid system | 1.03e-19 | 108 |
skeletal system | 1.18e-18 | 100 |
musculoskeletal system | 2.98e-10 | 167 |
lateral plate mesoderm | 2.46e-09 | 203 |
connective tissue | 2.34e-08 | 371 |