FFCP PHASE1:Hg19::chr11:60935074..60935091,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:60935074..60935091,- | |||
|description=CAGE_peak_at_chr11:60935074..60935091,- | |||
|id=chr11:60935074..60935091,- | |||
|ontology_enrichment_celltype=CL:0002057!3.31e-54!42;CL:0000860!1.13e-49!45;CL:0000763!3.45e-47!112;CL:0000049!3.45e-47!112;CL:0002009!3.48e-47!65;CL:0002194!1.15e-46!63;CL:0000576!1.15e-46!63;CL:0000040!1.15e-46!63;CL:0000559!1.15e-46!63;CL:0000766!1.22e-43!76;CL:0000557!6.59e-42!71;CL:0000839!1.65e-40!70;CL:0000037!1.31e-36!172;CL:0000566!1.31e-36!172;CL:0000988!8.16e-36!182;CL:0002032!2.90e-35!165;CL:0000837!2.90e-35!165;CL:0000738!3.84e-34!140;CL:0002087!4.27e-31!119;CL:0002031!8.28e-27!124;CL:0000134!3.40e-09!358;CL:0002320!1.19e-08!365;CL:0000219!8.93e-07!390;CL:0000063!9.22e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.83e-62;33!CL:0002057;2.83e-62;33!CL:0000473;9.68e-47;39!CL:0000234;9.68e-47;39!CL:0000576;7.47e-33;48!CL:0000766;7.51e-21;69!CL:0000453;3.98e-11;5!CL:0002087;2.84e-10;104!CL:0000738;2.12e-09;136!CL:0000763;2.33e-09;100!CL:0000039;8.57e-08;7!CL:0000586;8.57e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.29e-60,42;CL:0002057,3.29e-60,42;CL:0000473,1.79e-55,48;CL:0000234,1.79e-55,48;CL:0002009,3.24e-44,61;CL:0002194,9.30e-43,59;CL:0000576,9.30e-43,59;CL:0000040,9.30e-43,59;CL:0000559,9.30e-43,59;CL:0000557,1.40e-39,67;CL:0000839,1.90e-37,66;CL:0000766,3.62e-36,72;CL:0000763,7.76e-33,108;CL:0000049,7.76e-33,108;CL:0000738,6.29e-31,136;CL:0002087,3.46e-28,115;CL:0002031,9.75e-27,120;CL:0002032,3.71e-26,161;CL:0000837,3.71e-26,161;CL:0000037,4.30e-26,168;CL:0000988,3.07e-24,177;CL:0000453,3.59e-11,5;CL:0000039,8.51e-08,7;CL:0000586,8.51e-08,7;CL:0000134,1.08e-07,354;CL:0002320,2.36e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.63e-46;42!CL:0000049;1.26e-13;108 | |||
|ontology_enrichment_disease=DOID:1749!2.59e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.43e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.59e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.46e-37!102;UBERON:0003061!2.46e-37!102;UBERON:0002371!1.75e-35!80;UBERON:0002193!8.27e-34!112;UBERON:0001474!5.90e-32!86;UBERON:0004765!2.19e-26!101;UBERON:0001434!2.19e-26!101;UBERON:0002405!1.20e-24!115;UBERON:0002204!1.92e-10!167;UBERON:0003081!1.05e-09!216;UBERON:0002384!6.49e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.09e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.48e-34,76;UBERON:0001474,6.17e-31,82;UBERON:0002390,1.96e-28,98;UBERON:0003061,1.96e-28,98;UBERON:0002405,2.09e-28,93;UBERON:0004765,1.70e-27,90;UBERON:0001434,9.94e-26,100;UBERON:0002193,4.89e-25,108;UBERON:0002204,3.04e-12,167;UBERON:0003081,1.45e-09,203;UBERON:0000926,7.62e-08,315;UBERON:0004120,7.62e-08,315;UBERON:0006603,7.62e-08,315;UBERON:0002384,6.79e-07,371;UBERON:0000473,8.04e-07,8 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52826811495903,1.64201178899891,1.41679406364623,0,0.383829398097213,0.77408061658038,0,0,0,0,0,0,0,0.200544447470142,1.08505435357926,0,0,0,0.581592955118259,2.26725566213286,1.21292030593908,2.32429036905685,3.70051099219643,7.43295290148249,0.863077176966451,4.35473201099471,1.89185783910868,2.06847408441971,4.51839278508678,1.35426486594342,2.82363509313907,4.91231070104122,1.79778787556068,3.97909060082173,5.77672248736969,0.639337125799041,1.31940520074686,1.19678194572979,1.27867425159808,4.64334781805734,7.37600792098482,3.73693349397345,2.26123798731069,6.25779502104242,1.95469960234605,3.63239701580021,7.73383035573886,3.48108626184973,0.633765858935825,1.27562579979026,0.838634582033504,0.22465726229299,0.300353785683013,0.64290234678832,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0.324621940274555,0,2.05411211129873,0.626719583092093,0,0,0.1605880751037,0.403599414382095,0.425846237690326,2.06103206853459,0.614481528616916,0.671028323677248,0.333698283423817,0.976940477010201,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95862965542299,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.975966209950223,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.503464760927528,0,0,4.00896322603251,0.816164040795739,0,0,0,0,0,0,0.988511511572023,0.626531697032732,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17590876897253,4.78825636192214,0,0,0,0,0,0,0,0,0,0.596143835108969,0.0633107959558787,0.391102765469606,0,0,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15464825135177,0,0.229160424011684,0,1.19807400299395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4747128070665,0,0.0607495566580247,0,0,0,0.633602019116439,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,1.97611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,5.45608864750288,3.05589132720735,1.63565394255844,0,0.737318726261158,0,0,0.640150378164845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,2.20114318226015,2.54156465530744,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0,0,0,0,0,0,2.10545517115895,0,0,0,0,3.92503393273351,0,0,0,0,0,0,0,0,0,0,0.128915775947154,2.89829352182294,3.21397089490184,0,0,0,0,0,1.26217249754548,0,0,0,0,0,0,0,0,0,3.05966489225945,1.3360870263278,1.37842349302267,5.76627340372463,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.336760265072938,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,2.24397944612263 | |||
|short_description=p@chr11:60935074..60935091,- | |||
}} |
Latest revision as of 23:22, 23 July 2015
Short description: | p@chr11:60935074..60935091, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60935074..60935091, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.29e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.29e-60 | 42 |
defensive cell | 1.79e-55 | 48 |
phagocyte | 1.79e-55 | 48 |
macrophage dendritic cell progenitor | 3.24e-44 | 61 |
monopoietic cell | 9.30e-43 | 59 |
monocyte | 9.30e-43 | 59 |
monoblast | 9.30e-43 | 59 |
promonocyte | 9.30e-43 | 59 |
granulocyte monocyte progenitor cell | 1.40e-39 | 67 |
myeloid lineage restricted progenitor cell | 1.90e-37 | 66 |
myeloid leukocyte | 3.62e-36 | 72 |
myeloid cell | 7.76e-33 | 108 |
common myeloid progenitor | 7.76e-33 | 108 |
leukocyte | 6.29e-31 | 136 |
nongranular leukocyte | 3.46e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 9.75e-27 | 120 |
hematopoietic oligopotent progenitor cell | 3.71e-26 | 161 |
hematopoietic multipotent progenitor cell | 3.71e-26 | 161 |
hematopoietic stem cell | 4.30e-26 | 168 |
hematopoietic cell | 3.07e-24 | 177 |
Langerhans cell | 3.59e-11 | 5 |
germ line cell | 8.51e-08 | 7 |
germ cell | 8.51e-08 | 7 |
mesenchymal cell | 1.08e-07 | 354 |
connective tissue cell | 2.36e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.48e-34 | 76 |
bone element | 6.17e-31 | 82 |
hematopoietic system | 1.96e-28 | 98 |
blood island | 1.96e-28 | 98 |
immune system | 2.09e-28 | 93 |
skeletal element | 1.70e-27 | 90 |
skeletal system | 9.94e-26 | 100 |
hemolymphoid system | 4.89e-25 | 108 |
musculoskeletal system | 3.04e-12 | 167 |
lateral plate mesoderm | 1.45e-09 | 203 |
mesoderm | 7.62e-08 | 315 |
mesoderm-derived structure | 7.62e-08 | 315 |
presumptive mesoderm | 7.62e-08 | 315 |
connective tissue | 6.79e-07 | 371 |
testis | 8.04e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.59e-08 | 14 |