FFCP PHASE1:Hg19::chr11:65354945..65354949,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:65354945..65354949,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_at_chr11:65354945..65354949,+ | |description=CAGE_peak_at_chr11:65354945..65354949,+ | ||
|id=chr11:65354945..65354949,+ | |id=chr11:65354945..65354949,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.66e-78!42;CL:0000860!2.03e-72!45;CL:0002194!7.68e-57!63;CL:0000576!7.68e-57!63;CL:0000040!7.68e-57!63;CL:0000559!7.68e-57!63;CL:0000766!8.54e-57!76;CL:0002009!6.55e-55!65;CL:0000839!1.47e-50!70;CL:0000557!9.24e-50!71;CL:0000763!2.33e-36!112;CL:0000049!2.33e-36!112;CL:0000738!3.68e-36!140;CL:0002087!4.01e-36!119;CL:0000037!5.16e-28!172;CL:0000566!5.16e-28!172;CL:0002031!1.08e-27!124;CL:0000988!4.74e-26!182;CL:0002032!5.19e-24!165;CL:0000837!5.19e-24!165;CL:0000842!2.07e-14!3;CL:0000134!4.55e-11!358;CL:0000224!6.28e-11!4;CL:0002320!1.07e-10!365;CL:0000219!2.13e-09!390;CL:0002393!3.34e-08!9;CL:0002397!3.34e-08!9;CL:0000048!7.67e-08!430;CL:0000723!1.28e-07!436;CL:0000080!2.00e-07!6;CL:0000034!2.46e-07!444;CL:0000767!9.63e-07!3 | |ontology_enrichment_celltype=CL:0002057!4.66e-78!42;CL:0000860!2.03e-72!45;CL:0002194!7.68e-57!63;CL:0000576!7.68e-57!63;CL:0000040!7.68e-57!63;CL:0000559!7.68e-57!63;CL:0000766!8.54e-57!76;CL:0002009!6.55e-55!65;CL:0000839!1.47e-50!70;CL:0000557!9.24e-50!71;CL:0000763!2.33e-36!112;CL:0000049!2.33e-36!112;CL:0000738!3.68e-36!140;CL:0002087!4.01e-36!119;CL:0000037!5.16e-28!172;CL:0000566!5.16e-28!172;CL:0002031!1.08e-27!124;CL:0000988!4.74e-26!182;CL:0002032!5.19e-24!165;CL:0000837!5.19e-24!165;CL:0000842!2.07e-14!3;CL:0000134!4.55e-11!358;CL:0000224!6.28e-11!4;CL:0002320!1.07e-10!365;CL:0000219!2.13e-09!390;CL:0002393!3.34e-08!9;CL:0002397!3.34e-08!9;CL:0000048!7.67e-08!430;CL:0000723!1.28e-07!436;CL:0000080!2.00e-07!6;CL:0000034!2.46e-07!444;CL:0000767!9.63e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-26;33!CL:0002057;1.01e-26;33!CL:0000473;1.77e-18;39!CL:0000234;1.77e-18;39!CL:0000576;1.65e-14;48!CL:0000771;2.02e-11;2!CL:0000766;7.38e-10;69!CL:0002087;1.88e-08;104!CL:0000226;6.78e-08;3!CL:0000842;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.05e-29,42;CL:0002057,1.05e-29,42;CL:0000473,5.69e-26,48;CL:0000234,5.69e-26,48;CL:0000766,1.45e-21,72;CL:0002194,9.78e-21,59;CL:0000576,9.78e-21,59;CL:0000040,9.78e-21,59;CL:0000559,9.78e-21,59;CL:0002009,4.64e-20,61;CL:0000839,1.52e-18,66;CL:0000557,2.88e-18,67;CL:0000763,2.52e-14,108;CL:0000049,2.52e-14,108;CL:0000738,4.83e-14,136;CL:0002087,2.08e-13,115;CL:0000771,1.82e-11,2;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177;CL:0002031,4.07e-10,120;CL:0002032,1.73e-09,161;CL:0000837,1.73e-09,161;CL:0000226,5.93e-08,3;CL:0000842,5.93e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.42e-22;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.85e-56!102;UBERON:0003061!5.85e-56!102;UBERON:0002193!2.63e-50!112;UBERON:0002371!1.82e-43!80;UBERON:0001474!5.41e-40!86;UBERON:0004765!1.40e-35!101;UBERON:0001434!1.40e-35!101;UBERON:0002405!2.85e-28!115;UBERON:0003081!2.30e-22!216;UBERON:0002204!7.78e-19!167;UBERON:0000178!1.69e-18!15;UBERON:0000179!1.69e-18!15;UBERON:0000463!1.69e-18!15;UBERON:0002384!3.40e-10!375;UBERON:0000926!2.80e-07!448;UBERON:0004120!2.80e-07!448;UBERON:0006603!2.80e-07!448 | |ontology_enrichment_uberon=UBERON:0002390!5.85e-56!102;UBERON:0003061!5.85e-56!102;UBERON:0002193!2.63e-50!112;UBERON:0002371!1.82e-43!80;UBERON:0001474!5.41e-40!86;UBERON:0004765!1.40e-35!101;UBERON:0001434!1.40e-35!101;UBERON:0002405!2.85e-28!115;UBERON:0003081!2.30e-22!216;UBERON:0002204!7.78e-19!167;UBERON:0000178!1.69e-18!15;UBERON:0000179!1.69e-18!15;UBERON:0000463!1.69e-18!15;UBERON:0002384!3.40e-10!375;UBERON:0000926!2.80e-07!448;UBERON:0004120!2.80e-07!448;UBERON:0006603!2.80e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.23e-16,76;UBERON:0002390,8.84e-16,98;UBERON:0003061,8.84e-16,98;UBERON:0001474,6.49e-15,82;UBERON:0002193,2.69e-14,108;UBERON:0004765,1.42e-13,90;UBERON:0002405,3.94e-13,93;UBERON:0001434,3.39e-12,100;UBERON:0003081,2.10e-07,203;UBERON:0002204,3.70e-07,167 | |||
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|short_description=p@chr11:65354945..65354949,+ | |short_description=p@chr11:65354945..65354949,+ | ||
}} | }} |
Latest revision as of 00:43, 24 July 2015
Short description: | p@chr11:65354945..65354949, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65354945..65354949, + |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.05e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-29 | 42 |
defensive cell | 5.69e-26 | 48 |
phagocyte | 5.69e-26 | 48 |
myeloid leukocyte | 1.45e-21 | 72 |
monopoietic cell | 9.78e-21 | 59 |
monocyte | 9.78e-21 | 59 |
monoblast | 9.78e-21 | 59 |
promonocyte | 9.78e-21 | 59 |
macrophage dendritic cell progenitor | 4.64e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.52e-18 | 66 |
granulocyte monocyte progenitor cell | 2.88e-18 | 67 |
myeloid cell | 2.52e-14 | 108 |
common myeloid progenitor | 2.52e-14 | 108 |
leukocyte | 4.83e-14 | 136 |
nongranular leukocyte | 2.08e-13 | 115 |
eosinophil | 1.82e-11 | 2 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 4.07e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.73e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-09 | 161 |
single nucleate cell | 5.93e-08 | 3 |
mononuclear cell | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.23e-16 | 76 |
hematopoietic system | 8.84e-16 | 98 |
blood island | 8.84e-16 | 98 |
bone element | 6.49e-15 | 82 |
hemolymphoid system | 2.69e-14 | 108 |
skeletal element | 1.42e-13 | 90 |
immune system | 3.94e-13 | 93 |
skeletal system | 3.39e-12 | 100 |
lateral plate mesoderm | 2.10e-07 | 203 |
musculoskeletal system | 3.70e-07 | 167 |